RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 TFAP2BQ92481 460 aa21.62■■□□□ 1.05
CPNE1-219ENST00000440240 GOLGA1Q92805 767 aa21.62■■□□□ 1.05
CPNE1-219ENST00000440240 TMEM121BQ9BXQ6 578 aaPredicted RBP21.62■■□□□ 1.05
CPNE1-219ENST00000440240 PCED1AQ9H1Q7 454 aa21.62■■□□□ 1.05
CPNE1-219ENST00000440240 P4HA2O15460 535 aa21.61■■□□□ 1.05
CPNE1-219ENST00000440240 HYAL3O43820 417 aaPredicted RBP21.61■■□□□ 1.05
CPNE1-219ENST00000440240 GJB3O75712 270 aa21.61■■□□□ 1.05
CPNE1-219ENST00000440240 SLC11A2P49281 568 aa21.61■■□□□ 1.05
CPNE1-219ENST00000440240 CCDC40Q4G0X9 1142 aa21.61■■□□□ 1.05
CPNE1-219ENST00000440240 FNDC3BQ53EP0 1204 aaKnown RBP21.61■■□□□ 1.05
CPNE1-219ENST00000440240 DCAF12L1Q5VU92 463 aa21.61■■□□□ 1.05
CPNE1-219ENST00000440240 NUGGCQ68CJ6 796 aa21.61■■□□□ 1.05
CPNE1-219ENST00000440240 PMF1Q6P1K2 205 aa21.61■■□□□ 1.05
CPNE1-219ENST00000440240 AHI1Q8N157 1196 aa21.61■■□□□ 1.05
CPNE1-219ENST00000440240 ZNF557Q8N988 423 aaPredicted RBP21.61■■□□□ 1.05
CPNE1-219ENST00000440240 GATA6Q92908 595 aa21.61■■□□□ 1.05
CPNE1-219ENST00000440240 HSFY1Q96LI6 401 aa21.61■■□□□ 1.05
CPNE1-219ENST00000440240 MIR1-1HGQ9H1L0 117 aa21.61■■□□□ 1.05
CPNE1-219ENST00000440240 TMEM245Q9H330 911 aa21.61■■□□□ 1.05
CPNE1-219ENST00000440240 ABCB8Q9NUT2 735 aa21.61■■□□□ 1.05
CPNE1-219ENST00000440240 ZMIZ1Q9ULJ6 1067 aa21.61■■□□□ 1.05
CPNE1-219ENST00000440240 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.61■■□□□ 1.052e-6■■■■■ 55.4
CPNE1-219ENST00000440240 MSRB2Q9Y3D2 182 aa21.61■■□□□ 1.05
CPNE1-219ENST00000440240 PCDHB9Q9Y5E1 797 aa21.61■■□□□ 1.05
CPNE1-219ENST00000440240 PCDH15Q96QU1 1955 aa21.61■■□□□ 1.05
CPNE1-219ENST00000440240 ADAMTS9Q9P2N4 1935 aa21.61■■□□□ 1.05
CPNE1-219ENST00000440240 BCAT2O15382 392 aaPredicted RBP21.6■■□□□ 1.05
CPNE1-219ENST00000440240 IRAK2O43187 625 aa21.6■■□□□ 1.05
CPNE1-219ENST00000440240 SH3BP5O60239 455 aa21.6■■□□□ 1.05
CPNE1-219ENST00000440240 ATP5BP06576 529 aaKnown RBP21.6■■□□□ 1.05
CPNE1-219ENST00000440240 RGS7P49802 495 aa21.6■■□□□ 1.05
CPNE1-219ENST00000440240 RING1Q06587 406 aa21.6■■□□□ 1.05
CPNE1-219ENST00000440240 GRIK2Q13002 908 aa21.6■■□□□ 1.05
CPNE1-219ENST00000440240 BECN1Q14457 450 aa21.6■■□□□ 1.05
CPNE1-219ENST00000440240 ZNF423Q2M1K9 1284 aa21.6■■□□□ 1.05
CPNE1-219ENST00000440240 CHST9Q7L1S5 443 aa21.6■■□□□ 1.05
CPNE1-219ENST00000440240 KIAA0907Q7Z7F0 614 aaPredicted RBP21.6■■□□□ 1.05
CPNE1-219ENST00000440240 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.6■■□□□ 1.05
CPNE1-219ENST00000440240 AZIN2Q96A70 460 aa21.6■■□□□ 1.05
CPNE1-219ENST00000440240 FBRSQ9HAH7 460 aa21.6■■□□□ 1.05
CPNE1-219ENST00000440240 GGA2Q9UJY4 613 aa21.6■■□□□ 1.05
CPNE1-219ENST00000440240 ASPMQ8IZT6 3477 aa21.6■■□□□ 1.05
CPNE1-219ENST00000440240 RNF225M0QZC1 329 aaPredicted RBP21.59■■□□□ 1.05
CPNE1-219ENST00000440240 MSI1O43347 362 aaKnown RBP21.59■■□□□ 1.05
CPNE1-219ENST00000440240 FBXO21O94952 628 aa21.59■■□□□ 1.05
CPNE1-219ENST00000440240 LTFP02788 710 aa21.59■■□□□ 1.05
CPNE1-219ENST00000440240 DLDP09622 509 aaKnown RBP21.59■■□□□ 1.05
CPNE1-219ENST00000440240 C7P10643 843 aa21.59■■□□□ 1.05
CPNE1-219ENST00000440240 PABPC1P11940 636 aaKnown RBP21.59■■□□□ 1.05
CPNE1-219ENST00000440240 HLA-EP13747 358 aa21.59■■□□□ 1.05
CPNE1-219ENST00000440240 FAM193AP78312 1265 aa21.59■■□□□ 1.05
CPNE1-219ENST00000440240 TRIP6Q15654 476 aaKnown RBP21.59■■□□□ 1.05
CPNE1-219ENST00000440240 PIK3R6Q5UE93 754 aa21.59■■□□□ 1.05
CPNE1-219ENST00000440240 ISM2Q6H9L7 571 aa21.59■■□□□ 1.05
CPNE1-219ENST00000440240 FOXR2Q6PJQ5 311 aa21.59■■□□□ 1.05
CPNE1-219ENST00000440240 IL27RAQ6UWB1 636 aa21.59■■□□□ 1.05
CPNE1-219ENST00000440240 ADIPOR2Q86V24 386 aa21.59■■□□□ 1.05
CPNE1-219ENST00000440240 ZCCHC9Q8N567 271 aaKnown RBP21.59■■□□□ 1.05
CPNE1-219ENST00000440240 LHX5Q9H2C1 402 aa21.59■■□□□ 1.05
CPNE1-219ENST00000440240 BICDL2A1A5D9 508 aa21.58■■□□□ 1.05
CPNE1-219ENST00000440240 M0QYV0 167 aa21.58■■□□□ 1.05
CPNE1-219ENST00000440240 GABBR2O75899 941 aa21.58■■□□□ 1.05
CPNE1-219ENST00000440240 IGLV3-27P01718 113 aa21.58■■□□□ 1.05
CPNE1-219ENST00000440240 POLR2EP19388 210 aaKnown RBP21.58■■□□□ 1.05
CPNE1-219ENST00000440240 TBX4P57082 545 aa21.58■■□□□ 1.05
CPNE1-219ENST00000440240 GCNT1Q02742 428 aa21.58■■□□□ 1.05
CPNE1-219ENST00000440240 ZBTB16Q05516 673 aa21.58■■□□□ 1.05
CPNE1-219ENST00000440240 MBLAC2Q68D91 279 aa21.58■■□□□ 1.05
CPNE1-219ENST00000440240 LMO3Q8TAP4 145 aa21.58■■□□□ 1.05
CPNE1-219ENST00000440240 CYB5D2Q8WUJ1 264 aa21.58■■□□□ 1.05
CPNE1-219ENST00000440240 DDX50Q9BQ39 737 aaKnown RBP21.58■■□□□ 1.05
CPNE1-219ENST00000440240 SUN2Q9UH99 717 aa21.58■■□□□ 1.05
CPNE1-219ENST00000440240 EIF2B4Q9UI10 523 aaKnown RBP21.58■■□□□ 1.05
CPNE1-219ENST00000440240 MAN1B1Q9UKM7 699 aa21.58■■□□□ 1.05
CPNE1-219ENST00000440240 AKAP13Q12802 2813 aa21.57■■□□□ 1.04
CPNE1-219ENST00000440240 FAM221BA6H8Z2 402 aa21.57■■□□□ 1.04
CPNE1-219ENST00000440240 PIK3R2O00459 728 aa21.57■■□□□ 1.04
CPNE1-219ENST00000440240 ACSL4O60488 711 aa21.57■■□□□ 1.04
CPNE1-219ENST00000440240 TBL1XO60907 577 aa21.57■■□□□ 1.04
CPNE1-219ENST00000440240 CD44P16070 742 aaKnown RBP21.57■■□□□ 1.04
CPNE1-219ENST00000440240 BRD2P25440 801 aaKnown RBP21.57■■□□□ 1.04
CPNE1-219ENST00000440240 PTPRNQ16849 979 aa21.57■■□□□ 1.04
CPNE1-219ENST00000440240 TTI2Q6NXR4 508 aa21.57■■□□□ 1.04
CPNE1-219ENST00000440240 FAM124AQ86V42 546 aa21.57■■□□□ 1.04
CPNE1-219ENST00000440240 CACUL1Q86Y37 369 aa21.57■■□□□ 1.04
CPNE1-219ENST00000440240 NAXDQ8IW45 347 aa21.57■■□□□ 1.04
CPNE1-219ENST00000440240 EHBP1Q8NDI1 1231 aa21.57■■□□□ 1.04
CPNE1-219ENST00000440240 CAMK1GQ96NX5 476 aa21.57■■□□□ 1.04
CPNE1-219ENST00000440240 ZSWIM1Q9BR11 485 aa21.57■■□□□ 1.04
CPNE1-219ENST00000440240 FAM208BQ5VWN6 2430 aa21.56■■□□□ 1.04
CPNE1-219ENST00000440240 SART1O43290 800 aaKnown RBP21.56■■□□□ 1.04
CPNE1-219ENST00000440240 CER1O95813 267 aa21.56■■□□□ 1.04
CPNE1-219ENST00000440240 GNA14O95837 355 aa21.56■■□□□ 1.04
CPNE1-219ENST00000440240 ZNF883P0CG24 379 aa21.56■■□□□ 1.04
CPNE1-219ENST00000440240 MATKP42679 507 aa21.56■■□□□ 1.04
CPNE1-219ENST00000440240 KLHL10Q6JEL2 608 aa21.56■■□□□ 1.04
CPNE1-219ENST00000440240 RFWD3Q6PCD5 774 aa21.56■■□□□ 1.04
CPNE1-219ENST00000440240 RRAGAQ7L523 313 aa21.56■■□□□ 1.04
CPNE1-219ENST00000440240 CHCHD4Q8N4Q1 142 aa21.56■■□□□ 1.04
CPNE1-219ENST00000440240 KAT5Q92993 513 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms