RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 TMEM110Q86TL2 294 aa7.49□□□□□ -1.21
LSM8-204ENST00000424702 PSTKQ8IV42 348 aaKnown RBP7.49□□□□□ -1.21
LSM8-204ENST00000424702 PALM2Q8IXS6 379 aa7.49□□□□□ -1.21
LSM8-204ENST00000424702 WDTC1Q8N5D0 677 aa7.49□□□□□ -1.21
LSM8-204ENST00000424702 NIPA2Q8N8Q9 360 aa7.49□□□□□ -1.21
LSM8-204ENST00000424702 UHMK1Q8TAS1 419 aaKnown RBP7.49□□□□□ -1.21
LSM8-204ENST00000424702 ACTL9Q8TC94 416 aa7.49□□□□□ -1.21
LSM8-204ENST00000424702 SLC35F5Q8WV83 523 aa7.49□□□□□ -1.21
LSM8-204ENST00000424702 SPON2Q9BUD6 331 aa7.49□□□□□ -1.21
LSM8-204ENST00000424702 BRD9Q9H8M2 597 aa7.49□□□□□ -1.21
LSM8-204ENST00000424702 DYRK4Q9NR20 520 aa7.49□□□□□ -1.21
LSM8-204ENST00000424702 WDR81Q562E7 1941 aa7.49□□□□□ -1.21
LSM8-204ENST00000424702 C2orf71A6NGG8 1288 aa7.49□□□□□ -1.21
LSM8-204ENST00000424702 PSMD3O43242 534 aa7.49□□□□□ -1.21
LSM8-204ENST00000424702 HCRTO43612 131 aa7.49□□□□□ -1.21
LSM8-204ENST00000424702 RHOCP08134 193 aa7.49□□□□□ -1.21
LSM8-204ENST00000424702 PMS2P54278 862 aa7.49□□□□□ -1.21
LSM8-204ENST00000424702 EIF3BP55884 814 aaKnown RBP7.49□□□□□ -1.21
LSM8-204ENST00000424702 ZNF235Q14590 738 aa7.49□□□□□ -1.21
LSM8-204ENST00000424702 PDK1Q15118 436 aa7.49□□□□□ -1.21
LSM8-204ENST00000424702 DUSP6Q16828 381 aa7.49□□□□□ -1.21
LSM8-204ENST00000424702 DNAJC21Q5F1R6 531 aaKnown RBP7.49□□□□□ -1.21
LSM8-204ENST00000424702 CENPUQ71F23 418 aa7.49□□□□□ -1.21
LSM8-204ENST00000424702 TMCO2Q7Z6W1 182 aaPredicted RBP7.49□□□□□ -1.21
LSM8-204ENST00000424702 CPNE8Q86YQ8 564 aa7.49□□□□□ -1.21
LSM8-204ENST00000424702 CELF5Q8N6W0 485 aaKnown RBP7.49□□□□□ -1.21
LSM8-204ENST00000424702 CMASQ8NFW8 434 aaPredicted RBP7.49□□□□□ -1.21
LSM8-204ENST00000424702 DDI1Q8WTU0 396 aa7.49□□□□□ -1.21
LSM8-204ENST00000424702 DEPDC1BQ8WUY9 529 aa7.49□□□□□ -1.21
LSM8-204ENST00000424702 USP13Q92995 863 aaPredicted RBP7.49□□□□□ -1.21
LSM8-204ENST00000424702 PKNOX2Q96KN3 472 aa7.49□□□□□ -1.21
LSM8-204ENST00000424702 B3GALT6Q96L58 329 aa7.49□□□□□ -1.21
LSM8-204ENST00000424702 KLC2Q9H0B6 622 aa7.49□□□□□ -1.21
LSM8-204ENST00000424702 BRD8Q9H0E9 1235 aa7.49□□□□□ -1.21
LSM8-204ENST00000424702 MUC3BQ9H195 1237 aa7.49□□□□□ -1.21
LSM8-204ENST00000424702 GDF3Q9NR23 364 aa7.49□□□□□ -1.21
LSM8-204ENST00000424702 PCYOX1Q9UHG3 505 aa7.49□□□□□ -1.21
LSM8-204ENST00000424702 IRAK3Q9Y616 596 aa7.49□□□□□ -1.21
LSM8-204ENST00000424702 CITO14578 2027 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 C2CD4BA6NLJ0 364 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 C5orf67F2Z3F1 127 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 H0Y626 953 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 PFDN6O15212 129 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 PHBP35232 272 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 ITKQ08881 620 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 STARD3Q14849 445 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 KIAA0319Q5VV43 1072 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 RETSATQ6NUM9 610 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 FAM171BQ6P995 826 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 RNF19BQ6ZMZ0 732 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 PDIK1LQ8N165 341 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 ATPAF2Q8N5M1 289 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 VN1R2Q8NFZ6 395 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 RAPGEF5Q92565 580 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 EDEM1Q92611 657 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 FAF2Q96CS3 445 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 TMA16Q96EY4 203 aaKnown RBP7.48□□□□□ -1.21
LSM8-204ENST00000424702 SHDQ96IW2 340 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 CXCL16Q9H2A7 254 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 LRRC19Q9H756 370 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 CHST7Q9NS84 486 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 SMPD4Q9NXE4 827 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 TTLL3Q9Y4R7 772 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 A0A1W2PQH9 124 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 TULP2O00295 520 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 RGS16O15492 202 aaPredicted RBP7.48□□□□□ -1.21
LSM8-204ENST00000424702 NEFHP12036 1026 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 STIP1P31948 543 aaKnown RBP7.48□□□□□ -1.21
LSM8-204ENST00000424702 GABRB2P47870 512 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 P3H1Q32P28 736 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 MPPE1Q53F39 396 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 TCEAL5Q5H9L2 206 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 TIGD7Q6NT04 549 aaPredicted RBP7.48□□□□□ -1.21
LSM8-204ENST00000424702 C4orf22Q6V702 233 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 BEND5Q7L4P6 421 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 SCML4Q8N228 414 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 EIF1ADQ8N9N8 165 aaKnown RBP7.48□□□□□ -1.21
LSM8-204ENST00000424702 OR10T2Q8NGX3 314 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 WFIKKN2Q8TEU8 576 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 KBTBD7Q8WVZ9 684 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 FAM161BQ96MY7 647 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 PAAF1Q9BRP4 392 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 APOL5Q9BWW9 433 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 FUT8Q9BYC5 575 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 PRM3Q9NNZ6 103 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 DNAJC17Q9NVM6 304 aaKnown RBP7.48□□□□□ -1.21
LSM8-204ENST00000424702 PLAAQ9Y263 795 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 hCG_1818297A0A087WSY0 165 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 KCNN4O15554 427 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 TGM5O43548 720 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 HPDP32754 393 aaPredicted RBP7.48□□□□□ -1.21
LSM8-204ENST00000424702 VCPP55072 806 aaKnown RBP7.48□□□□□ -1.21
LSM8-204ENST00000424702 ARL4CP56559 192 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 PPP2R5DQ14738 602 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 SLC25A52Q3SY17 297 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 DCAF12L1Q5VU92 463 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 LRRC49Q8IUZ0 686 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 NXPE3Q969Y0 559 aa7.48□□□□□ -1.21
LSM8-204ENST00000424702 TRMT2BQ96GJ1 504 aaKnown RBP7.48□□□□□ -1.21
LSM8-204ENST00000424702 BTN2A3PQ96KV6 586 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms