RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 YJEFN3A6XGL0 299 aa14.39□□□□□ -0.11
CXCL12-202ENST00000374426 E7ENQ6 273 aa14.39□□□□□ -0.11
CXCL12-202ENST00000374426 AFF3P51826 1226 aaKnown RBP14.39□□□□□ -0.11
CXCL12-202ENST00000374426 BCAT1P54687 386 aa14.39□□□□□ -0.11
CXCL12-202ENST00000374426 ADIGQ0VDE8 80 aa14.39□□□□□ -0.11
CXCL12-202ENST00000374426 PTPRNQ16849 979 aa14.39□□□□□ -0.11
CXCL12-202ENST00000374426 CBWD6Q4V339 395 aa14.39□□□□□ -0.11
CXCL12-202ENST00000374426 FNDC3BQ53EP0 1204 aaKnown RBP14.39□□□□□ -0.11
CXCL12-202ENST00000374426 CBWD3Q5JTY5 395 aa14.39□□□□□ -0.11
CXCL12-202ENST00000374426 CBWD5Q5RIA9 395 aa14.39□□□□□ -0.11
CXCL12-202ENST00000374426 BSPRYQ5W0U4 402 aa14.39□□□□□ -0.11
CXCL12-202ENST00000374426 CHST9Q7L1S5 443 aa14.39□□□□□ -0.11
CXCL12-202ENST00000374426 KIAA0907Q7Z7F0 614 aaPredicted RBP14.39□□□□□ -0.11
CXCL12-202ENST00000374426 ADIPOR2Q86V24 386 aa14.39□□□□□ -0.11
CXCL12-202ENST00000374426 ZC3H3Q8IXZ2 948 aaKnown RBP14.39□□□□□ -0.11
CXCL12-202ENST00000374426 SMYD4Q8IYR2 804 aaPredicted RBP14.39□□□□□ -0.11
CXCL12-202ENST00000374426 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.39□□□□□ -0.11
CXCL12-202ENST00000374426 WFIKKN2Q8TEU8 576 aa14.39□□□□□ -0.11
CXCL12-202ENST00000374426 SNX19Q92543 992 aa14.39□□□□□ -0.11
CXCL12-202ENST00000374426 EDEM1Q92611 657 aa14.39□□□□□ -0.11
CXCL12-202ENST00000374426 GOLPH3LQ9H4A5 285 aa14.39□□□□□ -0.11
CXCL12-202ENST00000374426 CCDC86Q9H6F5 360 aaKnown RBP14.39□□□□□ -0.11
CXCL12-202ENST00000374426 LRRC4Q9HBW1 653 aa14.39□□□□□ -0.11
CXCL12-202ENST00000374426 ABCB8Q9NUT2 735 aa14.39□□□□□ -0.11
CXCL12-202ENST00000374426 PLA2G4CQ9UP65 541 aa14.39□□□□□ -0.11
CXCL12-202ENST00000374426 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.39□□□□□ -0.11
CXCL12-202ENST00000374426 ZDHHC9Q9Y397 364 aa14.39□□□□□ -0.11
CXCL12-202ENST00000374426 PCDHGB2Q9Y5G2 931 aa14.39□□□□□ -0.11
CXCL12-202ENST00000374426 MUC22E2RYF6 1773 aaPredicted RBP14.39□□□□□ -0.11
CXCL12-202ENST00000374426 URB1O60287 2271 aaKnown RBP14.38□□□□□ -0.11
CXCL12-202ENST00000374426 GCN1Q92616 2671 aaKnown RBP14.38□□□□□ -0.11
CXCL12-202ENST00000374426 FLRT2O43155 660 aa14.38□□□□□ -0.11
CXCL12-202ENST00000374426 MSI1O43347 362 aaKnown RBP14.38□□□□□ -0.11
CXCL12-202ENST00000374426 STX10O60499 249 aa14.38□□□□□ -0.11
CXCL12-202ENST00000374426 DKK1O94907 266 aa14.38□□□□□ -0.11
CXCL12-202ENST00000374426 ATXN1LP0C7T5 689 aaKnown RBP14.38□□□□□ -0.11
CXCL12-202ENST00000374426 EPB41P11171 864 aaKnown RBP14.38□□□□□ -0.11
CXCL12-202ENST00000374426 SGSHP51688 502 aa14.38□□□□□ -0.11
CXCL12-202ENST00000374426 ZNF445P59923 1031 aa14.38□□□□□ -0.11
CXCL12-202ENST00000374426 KRT85P78386 507 aa14.38□□□□□ -0.11
CXCL12-202ENST00000374426 BST2Q10589 180 aaKnown RBP14.38□□□□□ -0.11
CXCL12-202ENST00000374426 CUL2Q13617 745 aa14.38□□□□□ -0.11
CXCL12-202ENST00000374426 KIF19Q2TAC6 998 aa14.38□□□□□ -0.11
CXCL12-202ENST00000374426 SGO2Q562F6 1265 aa14.38□□□□□ -0.11
CXCL12-202ENST00000374426 ADGRF1Q5T601 910 aa14.38□□□□□ -0.11
CXCL12-202ENST00000374426 C19orf48Q6RUI8 117 aa14.38□□□□□ -0.11
CXCL12-202ENST00000374426 MDM1Q8TC05 714 aa14.38□□□□□ -0.11
CXCL12-202ENST00000374426 WFDC5Q8TCV5 224 aa14.38□□□□□ -0.11
CXCL12-202ENST00000374426 RHBDD1Q8TEB9 315 aa14.38□□□□□ -0.11
CXCL12-202ENST00000374426 RNF139Q8WU17 664 aa14.38□□□□□ -0.11
CXCL12-202ENST00000374426 TMA16Q96EY4 203 aaKnown RBP14.38□□□□□ -0.11
CXCL12-202ENST00000374426 IPO9Q96P70 1041 aaKnown RBP14.38□□□□□ -0.11
CXCL12-202ENST00000374426 PRSS16Q9NQE7 514 aa14.38□□□□□ -0.11
CXCL12-202ENST00000374426 GGA2Q9UJY4 613 aa14.38□□□□□ -0.11
CXCL12-202ENST00000374426 BTBD3Q9Y2F9 522 aa14.38□□□□□ -0.11
CXCL12-202ENST00000374426 COQ4Q9Y3A0 265 aa14.38□□□□□ -0.11
CXCL12-202ENST00000374426 SNX11Q9Y5W9 270 aa14.38□□□□□ -0.11
CXCL12-202ENST00000374426 ADAMTS20P59510 1910 aa14.38□□□□□ -0.11
CXCL12-202ENST00000374426 KNTC1P50748 2209 aa14.38□□□□□ -0.11
CXCL12-202ENST00000374426 ASXL3Q9C0F0 2248 aa14.38□□□□□ -0.11
CXCL12-202ENST00000374426 PTPRBP23467 1997 aa14.38□□□□□ -0.11
CXCL12-202ENST00000374426 BPTFQ12830 3046 aa14.37□□□□□ -0.11
CXCL12-202ENST00000374426 CETN3O15182 167 aa14.37□□□□□ -0.11
CXCL12-202ENST00000374426 LATS1O95835 1130 aa14.37□□□□□ -0.11
CXCL12-202ENST00000374426 DLDP09622 509 aaKnown RBP14.37□□□□□ -0.11
CXCL12-202ENST00000374426 PABPC1P11940 636 aaKnown RBP14.37□□□□□ -0.11
CXCL12-202ENST00000374426 RPS14P62263 151 aaKnown RBP14.37□□□□□ -0.11
CXCL12-202ENST00000374426 ACAP1Q15027 740 aa14.37□□□□□ -0.11
CXCL12-202ENST00000374426 PKDCCQ504Y2 493 aa14.37□□□□□ -0.11
CXCL12-202ENST00000374426 MBLAC2Q68D91 279 aa14.37□□□□□ -0.11
CXCL12-202ENST00000374426 LAYNQ6UX15 382 aa14.37□□□□□ -0.11
CXCL12-202ENST00000374426 TMPRSS7Q7RTY8 843 aa14.37□□□□□ -0.11
CXCL12-202ENST00000374426 AHI1Q8N157 1196 aa14.37□□□□□ -0.11
CXCL12-202ENST00000374426 UBA3Q8TBC4 463 aa14.37□□□□□ -0.11
CXCL12-202ENST00000374426 KCTD13Q8WZ19 329 aa14.37□□□□□ -0.11
CXCL12-202ENST00000374426 BIRC7Q96CA5 298 aa14.37□□□□□ -0.11
CXCL12-202ENST00000374426 CDC6Q99741 560 aa14.37□□□□□ -0.11
CXCL12-202ENST00000374426 TM9SF3Q9HD45 589 aa14.37□□□□□ -0.11
CXCL12-202ENST00000374426 OSGEPQ9NPF4 335 aa14.37□□□□□ -0.11
CXCL12-202ENST00000374426 ABCC13Q9NSE7 274 aa14.37□□□□□ -0.11
CXCL12-202ENST00000374426 HESX1Q9UBX0 185 aa14.37□□□□□ -0.11
CXCL12-202ENST00000374426 ANKRD6Q9Y2G4 727 aa14.37□□□□□ -0.11
CXCL12-202ENST00000374426 A0A1W2PQ27 194 aa14.36□□□□□ -0.11
CXCL12-202ENST00000374426 A0A1W2PQ64 194 aa14.36□□□□□ -0.11
CXCL12-202ENST00000374426 O00370 1275 aa14.36□□□□□ -0.11
CXCL12-202ENST00000374426 GABBR2O75899 941 aa14.36□□□□□ -0.11
CXCL12-202ENST00000374426 ZNF202O95125 648 aa14.36□□□□□ -0.11
CXCL12-202ENST00000374426 SEMA4FO95754 770 aa14.36□□□□□ -0.11
CXCL12-202ENST00000374426 CD19P15391 556 aa14.36□□□□□ -0.11
CXCL12-202ENST00000374426 GRIA4P48058 902 aa14.36□□□□□ -0.11
CXCL12-202ENST00000374426 DAOAP59103 153 aa14.36□□□□□ -0.11
CXCL12-202ENST00000374426 ZBTB16Q05516 673 aa14.36□□□□□ -0.11
CXCL12-202ENST00000374426 DCAF17Q5H9S7 520 aaPredicted RBP14.36□□□□□ -0.11
CXCL12-202ENST00000374426 KCNT1Q5JUK3 1230 aa14.36□□□□□ -0.11
CXCL12-202ENST00000374426 TCERG1LQ5VWI1 586 aa14.36□□□□□ -0.11
CXCL12-202ENST00000374426 RFWD3Q6PCD5 774 aa14.36□□□□□ -0.11
CXCL12-202ENST00000374426 MARCH9Q86YJ5 346 aa14.36□□□□□ -0.11
CXCL12-202ENST00000374426 SIX6OS1Q8N1H7 587 aa14.36□□□□□ -0.11
CXCL12-202ENST00000374426 SCML4Q8N228 414 aa14.36□□□□□ -0.11
CXCL12-202ENST00000374426 UBR7Q8N806 425 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms