RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 GPD1LQ8N335 351 aa12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 BHLHE22Q8NFJ8 381 aaPredicted RBP12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 ADCY4Q8NFM4 1077 aa12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 TEKT1Q969V4 418 aa12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 NAA50Q9GZZ1 169 aaKnown RBP12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 STN1Q9H668 368 aaKnown RBP12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 PAIP2BQ9ULR5 123 aaKnown RBP12.02□□□□□ -0.49
SMARCA1-201ENST00000371121 ADGRA2Q96PE1 1338 aa12.01□□□□□ -0.49
SMARCA1-201ENST00000371121 K7EPI3 171 aa12.01□□□□□ -0.49
SMARCA1-201ENST00000371121 WDR46O15213 610 aaKnown RBP12.01□□□□□ -0.49
SMARCA1-201ENST00000371121 CHADO15335 359 aa12.01□□□□□ -0.49
SMARCA1-201ENST00000371121 MAGEA6P43360 314 aa12.01□□□□□ -0.49
SMARCA1-201ENST00000371121 ACOT2P49753 483 aa12.01□□□□□ -0.49
SMARCA1-201ENST00000371121 VPS72Q15906 364 aa12.01□□□□□ -0.49
SMARCA1-201ENST00000371121 DSELQ8IZU8 1212 aa12.01□□□□□ -0.49
SMARCA1-201ENST00000371121 RSAD2Q8WXG1 361 aa12.01□□□□□ -0.49
SMARCA1-201ENST00000371121 ZBTB45Q96K62 511 aaPredicted RBP12.01□□□□□ -0.49
SMARCA1-201ENST00000371121 AGO4Q9HCK5 861 aaKnown RBP12.01□□□□□ -0.49
SMARCA1-201ENST00000371121 TMEM216Q9P0N5 145 aa12.01□□□□□ -0.49
SMARCA1-201ENST00000371121 ZC3H7BQ9UGR2 993 aaKnown RBP12.01□□□□□ -0.49
SMARCA1-201ENST00000371121 GGA1Q9UJY5 639 aa12.01□□□□□ -0.49
SMARCA1-201ENST00000371121 ARHGAP10A1A4S6 786 aa12.01□□□□□ -0.49
SMARCA1-201ENST00000371121 TRPA1O75762 1119 aa12.01□□□□□ -0.49
SMARCA1-201ENST00000371121 MAP3K6O95382 1288 aa12.01□□□□□ -0.49
SMARCA1-201ENST00000371121 H6PDO95479 791 aa12.01□□□□□ -0.49
SMARCA1-201ENST00000371121 CYTH1Q15438 398 aa12.01□□□□□ -0.49
SMARCA1-201ENST00000371121 LPCAT2Q7L5N7 544 aa12.01□□□□□ -0.49
SMARCA1-201ENST00000371121 SPATA18Q8TC71 538 aa12.01□□□□□ -0.49
SMARCA1-201ENST00000371121 DQX1Q8TE96 717 aaKnown RBP12.01□□□□□ -0.49
SMARCA1-201ENST00000371121 C12orf43Q96C57 262 aaKnown RBP12.01□□□□□ -0.49
SMARCA1-201ENST00000371121 ABHD8Q96I13 439 aa12.01□□□□□ -0.49
SMARCA1-201ENST00000371121 PDZD7Q9H5P4 517 aa12.01□□□□□ -0.49
SMARCA1-201ENST00000371121 DHX33Q9H6R0 707 aaKnown RBP12.01□□□□□ -0.49
SMARCA1-201ENST00000371121 COQ10BQ9H8M1 238 aa12.01□□□□□ -0.49
SMARCA1-201ENST00000371121 DDX56Q9NY93 547 aaKnown RBP12.01□□□□□ -0.49
SMARCA1-201ENST00000371121 SELENONQ9NZV5 590 aa12.01□□□□□ -0.49
SMARCA1-201ENST00000371121 APOBEC2Q9Y235 224 aaKnown RBP12.01□□□□□ -0.49
SMARCA1-201ENST00000371121 PIK3R2O00459 728 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 SULT1C4O75897 302 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 CDH5P33151 784 aaPredicted RBP12□□□□□ -0.49
SMARCA1-201ENST00000371121 NIPAL4Q0D2K0 466 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 NOMO1Q15155 1222 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 TRIP11Q15643 1979 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 NHSL2Q5HYW2 709 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 ZFYVE27Q5T4F4 411 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 UBR3Q6ZT12 1888 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 MIER3Q7Z3K6 550 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 PTAR1Q7Z6K3 402 aaPredicted RBP12□□□□□ -0.49
SMARCA1-201ENST00000371121 HMGCLL1Q8TB92 370 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 USP13Q92995 863 aaPredicted RBP12□□□□□ -0.49
SMARCA1-201ENST00000371121 RTP4Q96DX8 246 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 ERLEC1Q96DZ1 483 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 CCDC17Q96LX7 622 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 MUC3BQ9H195 1237 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 VPS28Q9UK41 221 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 TPP1O14773 563 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 XPO1O14980 1071 aaKnown RBP12□□□□□ -0.49
SMARCA1-201ENST00000371121 XPOTO43592 962 aaKnown RBP12□□□□□ -0.49
SMARCA1-201ENST00000371121 KRT37O76014 449 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 METTL18O95568 372 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 GSTT2P0CG29 244 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 GSTT2BP0CG30 244 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 ARSAP15289 507 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 QARSP47897 775 aaKnown RBP12□□□□□ -0.49
SMARCA1-201ENST00000371121 LIG4P49917 911 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 SLC9A4Q6AI14 798 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 PRR5LQ6MZQ0 368 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 PLD6Q8N2A8 252 aaKnown RBP12□□□□□ -0.49
SMARCA1-201ENST00000371121 ACER1Q8TDN7 264 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 ATP6V1E2Q96A05 226 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 PGBD4Q96DM1 585 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 CMTM5Q96DZ9 223 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 CDRT15Q96T59 188 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 DOK1Q99704 481 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 IQCGQ9H095 443 aaKnown RBP12□□□□□ -0.49
SMARCA1-201ENST00000371121 SEMA6AQ9H2E6 1030 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 PLGRKTQ9HBL7 147 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 DNMT3BQ9UBC3 853 aaKnown RBP12□□□□□ -0.49
SMARCA1-201ENST00000371121 FAM32AQ9Y421 112 aaKnown RBP12□□□□□ -0.49
SMARCA1-201ENST00000371121 GRIA3P42263 894 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 IKBKEQ14164 716 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 PIGHQ14442 188 aaPredicted RBP12□□□□□ -0.49
SMARCA1-201ENST00000371121 SEZ6Q53EL9 994 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 FGD3Q5JSP0 725 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 WRNIP1Q96S55 665 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 SDCBP2Q9H190 292 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 IGSF9Q9P2J2 1179 aa12□□□□□ -0.49
SMARCA1-201ENST00000371121 CNOT11Q9UKZ1 510 aaKnown RBP12□□□□□ -0.49
SMARCA1-201ENST00000371121 E2F8A0AVK6 867 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 RPS6KA4O75676 772 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 NCF2P19878 526 aaPredicted RBP11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 SERPINB5P36952 375 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 PDCD4Q53EL6 469 aaKnown RBP11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 STXBP5Q5T5C0 1151 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 XKR5Q6UX68 686 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 MYO1HQ8N1T3 1032 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 SAMD3Q8N6K7 520 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 CERKQ8TCT0 537 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 DDI1Q8WTU0 396 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms