RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 FAM72BQ86X60 149 aa11.34□□□□□ -0.59
BRCC3-204ENST00000369462 ATP6V0D2Q8N8Y2 350 aa11.34□□□□□ -0.59
BRCC3-204ENST00000369462 WBP2Q969T9 261 aa11.34□□□□□ -0.59
BRCC3-204ENST00000369462 PABPC5Q96DU9 382 aaKnown RBP11.34□□□□□ -0.59
BRCC3-204ENST00000369462 HAPLN3Q96S86 360 aa11.34□□□□□ -0.59
BRCC3-204ENST00000369462 CDX2Q99626 313 aaPredicted RBP11.34□□□□□ -0.59
BRCC3-204ENST00000369462 OSBPL8Q9BZF1 889 aa11.34□□□□□ -0.59
BRCC3-204ENST00000369462 OBSL1O75147 1896 aa11.34□□□□□ -0.59
BRCC3-204ENST00000369462 KLKB1P03952 638 aa11.33□□□□□ -0.6
BRCC3-204ENST00000369462 PFKLP17858 780 aa11.33□□□□□ -0.6
BRCC3-204ENST00000369462 FSHRP23945 695 aa11.33□□□□□ -0.6
BRCC3-204ENST00000369462 IL4RP24394 825 aa11.33□□□□□ -0.6
BRCC3-204ENST00000369462 CORO1AP31146 461 aaKnown RBP11.33□□□□□ -0.6
BRCC3-204ENST00000369462 TFDP3Q5H9I0 405 aa11.33□□□□□ -0.6
BRCC3-204ENST00000369462 HABP4Q5JVS0 413 aaKnown RBP11.33□□□□□ -0.6
BRCC3-204ENST00000369462 DENND1CQ8IV53 801 aa11.33□□□□□ -0.6
BRCC3-204ENST00000369462 PLD4Q96BZ4 506 aa11.33□□□□□ -0.6
BRCC3-204ENST00000369462 HERPUD2Q9BSE4 406 aa11.33□□□□□ -0.6
BRCC3-204ENST00000369462 S1PR5Q9H228 398 aa11.33□□□□□ -0.6
BRCC3-204ENST00000369462 CCL26Q9Y258 94 aa11.33□□□□□ -0.6
BRCC3-204ENST00000369462 DENND4CQ5VZ89 1909 aa11.33□□□□□ -0.6
BRCC3-204ENST00000369462 PDE2AO00408 941 aaPredicted RBP11.33□□□□□ -0.6
BRCC3-204ENST00000369462 GOT1P17174 413 aa11.33□□□□□ -0.6
BRCC3-204ENST00000369462 ARL4AP40617 200 aa11.33□□□□□ -0.6
BRCC3-204ENST00000369462 PAFAH1B1P43034 410 aa11.33□□□□□ -0.6
BRCC3-204ENST00000369462 MLLT6P55198 1093 aaPredicted RBP11.33□□□□□ -0.6
BRCC3-204ENST00000369462 COPS2P61201 443 aa11.33□□□□□ -0.6
BRCC3-204ENST00000369462 ADCY2Q08462 1091 aa11.33□□□□□ -0.6
BRCC3-204ENST00000369462 TUBB2AQ13885 445 aa11.33□□□□□ -0.6
BRCC3-204ENST00000369462 PIK3R6Q5UE93 754 aa11.33□□□□□ -0.6
BRCC3-204ENST00000369462 GET4Q7L5D6 327 aaPredicted RBP11.33□□□□□ -0.6
BRCC3-204ENST00000369462 ARID3BQ8IVW6 561 aaPredicted RBP11.33□□□□□ -0.6
BRCC3-204ENST00000369462 RASGEF1CQ8N431 466 aa11.33□□□□□ -0.6
BRCC3-204ENST00000369462 DEFB123Q8N688 67 aa11.33□□□□□ -0.6
BRCC3-204ENST00000369462 ADAMTS19Q8TE59 1207 aa11.33□□□□□ -0.6
BRCC3-204ENST00000369462 TUBB2BQ9BVA1 445 aa11.33□□□□□ -0.6
BRCC3-204ENST00000369462 OSBPL2Q9H1P3 480 aa11.33□□□□□ -0.6
BRCC3-204ENST00000369462 TDP1Q9NUW8 608 aa11.33□□□□□ -0.6
BRCC3-204ENST00000369462 CWC15Q9P013 229 aaKnown RBP11.33□□□□□ -0.6
BRCC3-204ENST00000369462 HS3ST4Q9Y661 456 aa11.33□□□□□ -0.6
BRCC3-204ENST00000369462 C2orf16Q68DN1 1984 aa11.33□□□□□ -0.6
BRCC3-204ENST00000369462 CLUHO75153 1309 aa11.33□□□□□ -0.6
BRCC3-204ENST00000369462 TCRBV7S2A1N4TA0A589 114 aa11.32□□□□□ -0.6
BRCC3-204ENST00000369462 PGRMC1O00264 195 aaKnown RBP11.32□□□□□ -0.6
BRCC3-204ENST00000369462 COL19A1Q14993 1142 aa11.32□□□□□ -0.6
BRCC3-204ENST00000369462 LONRF2Q1L5Z9 754 aa11.32□□□□□ -0.6
BRCC3-204ENST00000369462 SLC13A5Q86YT5 568 aaPredicted RBP11.32□□□□□ -0.6
BRCC3-204ENST00000369462 FAM71BQ8TC56 605 aa11.32□□□□□ -0.6
BRCC3-204ENST00000369462 ACTRT1Q8TDG2 376 aa11.32□□□□□ -0.6
BRCC3-204ENST00000369462 FGF13Q92913 245 aa11.32□□□□□ -0.6
BRCC3-204ENST00000369462 CSPG4P5Q96PW8 444 aa11.32□□□□□ -0.6
BRCC3-204ENST00000369462 MAK16Q9BXY0 300 aaKnown RBP11.32□□□□□ -0.6
BRCC3-204ENST00000369462 CFAP97Q9P2B7 532 aa11.32□□□□□ -0.6
BRCC3-204ENST00000369462 ZMYM5Q9UJ78 669 aa11.32□□□□□ -0.6
BRCC3-204ENST00000369462 ARHGAP26Q9UNA1 814 aa11.32□□□□□ -0.6
BRCC3-204ENST00000369462 hCG_1818297A0A087WSY0 165 aa11.32□□□□□ -0.6
BRCC3-204ENST00000369462 SOBPA7XYQ1 873 aa11.32□□□□□ -0.6
BRCC3-204ENST00000369462 H3BQ06 376 aaPredicted RBP11.32□□□□□ -0.6
BRCC3-204ENST00000369462 LEFTY2O00292 366 aa11.32□□□□□ -0.6
BRCC3-204ENST00000369462 LRIG2O94898 1065 aa11.32□□□□□ -0.6
BRCC3-204ENST00000369462 PRAMEF12O95522 483 aa11.32□□□□□ -0.6
BRCC3-204ENST00000369462 SLC11A2P49281 568 aa11.32□□□□□ -0.6
BRCC3-204ENST00000369462 DYNLT1P63172 113 aa11.32□□□□□ -0.6
BRCC3-204ENST00000369462 SEMA3BQ13214 749 aa11.32□□□□□ -0.6
BRCC3-204ENST00000369462 SKIV2LQ15477 1246 aaKnown RBP11.32□□□□□ -0.6
BRCC3-204ENST00000369462 ANKRD20A8PQ5CZ79 823 aa11.32□□□□□ -0.6
BRCC3-204ENST00000369462 MS4A13Q5J8X5 152 aa11.32□□□□□ -0.6
BRCC3-204ENST00000369462 GPR153Q6NV75 609 aa11.32□□□□□ -0.6
BRCC3-204ENST00000369462 NPAS3Q8IXF0 933 aa11.32□□□□□ -0.6
BRCC3-204ENST00000369462 ZSCAN18Q8TBC5 510 aaPredicted RBP11.32□□□□□ -0.6
BRCC3-204ENST00000369462 SH3RF2Q8TEC5 729 aa11.32□□□□□ -0.6
BRCC3-204ENST00000369462 PPM1EQ8WY54 764 aa11.32□□□□□ -0.6
BRCC3-204ENST00000369462 USP13Q92995 863 aaPredicted RBP11.32□□□□□ -0.6
BRCC3-204ENST00000369462 MSLNLQ96KJ4 702 aa11.32□□□□□ -0.6
BRCC3-204ENST00000369462 EPAS1Q99814 870 aa11.32□□□□□ -0.6
BRCC3-204ENST00000369462 ZNF670Q9BS34 389 aa11.32□□□□□ -0.6
BRCC3-204ENST00000369462 RNF14Q9UBS8 474 aa11.32□□□□□ -0.6
BRCC3-204ENST00000369462 AGO1Q9UL18 857 aaKnown RBP11.32□□□□□ -0.6
BRCC3-204ENST00000369462 VANGL2Q9ULK5 521 aa11.32□□□□□ -0.6
BRCC3-204ENST00000369462 TTC7AQ9ULT0 858 aaPredicted RBP11.32□□□□□ -0.6
BRCC3-204ENST00000369462 GOLGA6L7A0A1B0GV03 622 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 EEF2KO00418 725 aaKnown RBP11.31□□□□□ -0.6
BRCC3-204ENST00000369462 DAPK3O43293 454 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 ACSL4O60488 711 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 TPI1P60174 286 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 AUHQ13825 339 aaKnown RBP11.31□□□□□ -0.6
BRCC3-204ENST00000369462 PPP2R5EQ16537 467 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 TAZQ16635 292 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 WHAMMP3Q1A5X7 153 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 RAP1GAP2Q684P5 730 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 C14orf80Q86SX3 495 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 RFX6Q8HWS3 928 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 PCDH19Q8TAB3 1148 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 TSC1Q92574 1164 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 C1orf74Q96LT6 269 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 RIPOR3Q96MK2 946 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 RNF157Q96PX1 679 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 L2HGDHQ9H9P8 463 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 SH3BP1Q9Y3L3 701 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 H3BRJ5 948 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms