RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 TMIGD3P0DMS9 266 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 CKBP12277 381 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 TMEM11P17152 192 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 ENDOUP21128 410 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 SOX6P35712 828 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 GCLCP48506 637 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 ADKP55263 362 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 DSG1Q02413 1049 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 GBE1Q04446 702 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 YWHAHQ04917 246 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 DEUP1Q05D60 604 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 TCP10Q12799 353 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 SGCGQ13326 291 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 LRRC32Q14392 662 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 NAA25Q14CX7 972 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 POLD3Q15054 466 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 LPAL2Q16609 132 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 IMMTQ16891 758 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 ZNF674Q2M3X9 581 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 GAB4Q2WGN9 574 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 KCNT1Q5JUK3 1230 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 C15orf52Q6ZUT6 534 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 B4GALNT4Q76KP1 1039 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 DDX53Q86TM3 631 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 KRT73Q86Y46 540 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 ZFPM1Q8IX07 1006 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 CCDC65Q8IXS2 484 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 FAM126BQ8IXS8 530 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 PEX5LQ8IYB4 626 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 GRAMD1CQ8IYS0 662 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 ZNF655Q8N720 491 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 CEP70Q8NHQ1 597 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 PPP1R35Q8TAP8 253 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 PIGOQ8TEQ8 1089 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 SSH1Q8WYL5 1049 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 RABGGTAQ92696 567 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 ATP6V0A1Q93050 837 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 FAM84BQ96KN1 310 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 ATP6V0BQ99437 205 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 SH3GL1Q99961 368 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 TCF25Q9BQ70 676 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 TBCDQ9BTW9 1192 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 NACA2Q9H009 215 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 CLMPQ9H6B4 373 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 SYNCQ9H7C4 482 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 MED4Q9NPJ6 270 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 MORF4L1Q9UBU8 362 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 ADD3Q9UEY8 706 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 SUSD2Q9UGT4 822 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 CD207Q9UJ71 328 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 ARHGAP26Q9UNA1 814 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 TMEM5Q9Y2B1 443 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 SESN1Q9Y6P5 492 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 LINC01553A4QN01 128 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 NT5C1B-RDH14C9J2C7 533 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 CBX4O00257 560 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 KPNA5O15131 536 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 MTSS1O43312 755 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 KERAO60938 352 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 SMC2O95347 1197 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 FGFR1OPO95684 399 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 CHGBP05060 677 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 S100A6P06703 90 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 SP9P0CG40 484 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 HNRNPLP14866 589 aaKnown RBP eCLIP3.71□□□□□ -1.821e-9■□□□□ 8.8
ECHDC1-205ENST00000368295 PDGFRAP16234 1089 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 HSD17B2P37059 387 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 ALDH9A1P49189 494 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 CCT4P50991 539 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 ACLYP53396 1101 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 HMGCS2P54868 508 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 ZNF445P59923 1031 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 PPP2R2AP63151 447 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 HTD2P86397 168 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 HYAL1Q12794 435 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 AIMP1Q12904 312 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 BNIP3Q12983 259 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 MORF4L2Q15014 288 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 ACAP2Q15057 778 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 ADIPOQQ15848 244 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 SKOR2Q2VWA4 1001 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 ADCK5Q3MIX3 580 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 KBTBD12Q3ZCT8 623 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 BOLA3Q53S33 107 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 XKR9Q5GH70 373 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 TOR1AIP1Q5JTV8 583 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 PPP1R21Q6ZMI0 780 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 RNF111Q6ZNA4 994 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 RGS9BPQ6ZS82 235 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 RAB11FIP2Q7L804 512 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 ADAT2Q7Z6V5 191 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 SPATA24Q86W54 205 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 CEP97Q8IW35 865 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 THNSL1Q8IYQ7 743 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 ZGPATQ8N5A5 531 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 C10orf53Q8N6V4 93 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 ATP11CQ8NB49 1132 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 GPRC5AQ8NFJ5 357 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 OR6C4Q8NGE1 309 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 SPPL3Q8TCT6 385 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms