RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 RUBCNQ92622 972 aa19.24■□□□□ 0.67
CLN3-206ENST00000360019 CCDC114Q96M63 670 aa19.24■□□□□ 0.67
CLN3-206ENST00000360019 EPAS1Q99814 870 aa19.24■□□□□ 0.67
CLN3-206ENST00000360019 SIK2Q9H0K1 926 aa19.24■□□□□ 0.67
CLN3-206ENST00000360019 HEY1Q9Y5J3 304 aa19.24■□□□□ 0.67
CLN3-206ENST00000360019 EPOPA6NHQ4 379 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 DCLK1O15075 740 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 C1RP00736 705 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 MYBL2P10244 700 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 ZFXP17010 805 aaPredicted RBP19.23■□□□□ 0.67
CLN3-206ENST00000360019 GABRR2P28476 465 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 HCAR3P49019 387 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 RING1Q06587 406 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 PIK3R6Q5UE93 754 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 MANEALQ5VSG8 457 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 GAREM2Q75VX8 874 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 ADGRD2Q7Z7M1 963 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 GDPD5Q8WTR4 605 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 CASKIN2Q8WXE0 1202 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 SEC14L1Q92503 715 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 ERP44Q9BS26 406 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 NACA2Q9H009 215 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 RNF38Q9H0F5 515 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 C10orf88Q9H8K7 445 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 DRG1Q9Y295 367 aaKnown RBP19.23■□□□□ 0.67
CLN3-206ENST00000360019 HS3ST4Q9Y661 456 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 ATG2AQ2TAZ0 1938 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 NRG2O14511 850 aaPredicted RBP19.23■□□□□ 0.67
CLN3-206ENST00000360019 MAP3K6O95382 1288 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 APOEP02649 317 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 TUBBP07437 444 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 ERCC2P18074 760 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 BMP8BP34820 402 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 KCNQ1P51787 676 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 ZNF135P52742 658 aaPredicted RBP19.23■□□□□ 0.67
CLN3-206ENST00000360019 EIF3EP60228 445 aaKnown RBP19.23■□□□□ 0.67
CLN3-206ENST00000360019 SLC10A2Q12908 348 aaPredicted RBP19.23■□□□□ 0.67
CLN3-206ENST00000360019 GRK7Q8WTQ7 553 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 TMEM121Q9BTD3 319 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 SLC28A3Q9HAS3 691 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 ZNF148Q9UQR1 794 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 UTP11Q9Y3A2 253 aaKnown RBP19.23■□□□□ 0.67
CLN3-206ENST00000360019 NEU2Q9Y3R4 380 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 HBS1LQ9Y450 684 aaKnown RBP19.23■□□□□ 0.67
CLN3-206ENST00000360019 OBSL1O75147 1896 aa19.23■□□□□ 0.67
CLN3-206ENST00000360019 MCF2LO15068 1137 aa19.22■□□□□ 0.67
CLN3-206ENST00000360019 DAPK3O43293 454 aa19.22■□□□□ 0.67
CLN3-206ENST00000360019 ITGAVP06756 1048 aa19.22■□□□□ 0.67
CLN3-206ENST00000360019 CARSP49589 748 aaKnown RBP19.22■□□□□ 0.67
CLN3-206ENST00000360019 KPNA1P52294 538 aaPredicted RBP19.22■□□□□ 0.67
CLN3-206ENST00000360019 PABPC1LQ4VXU2 614 aaKnown RBP19.22■□□□□ 0.67
CLN3-206ENST00000360019 DUPD1Q68J44 220 aa19.22■□□□□ 0.67
CLN3-206ENST00000360019 CCNI2Q6ZMN8 369 aaPredicted RBP19.22■□□□□ 0.67
CLN3-206ENST00000360019 RTL10Q7L3V2 364 aa19.22■□□□□ 0.67
CLN3-206ENST00000360019 RBM23Q86U06 439 aaKnown RBP19.22■□□□□ 0.67
CLN3-206ENST00000360019 ZC3H18Q86VM9 953 aaKnown RBP19.22■□□□□ 0.67
CLN3-206ENST00000360019 DDX42Q86XP3 938 aaKnown RBP eCLIP19.22■□□□□ 0.67
CLN3-206ENST00000360019 IFT20Q8IY31 132 aa19.22■□□□□ 0.67
CLN3-206ENST00000360019 GSPT2Q8IYD1 628 aaKnown RBP19.22■□□□□ 0.67
CLN3-206ENST00000360019 TDHQ8IZJ6 230 aa19.22■□□□□ 0.67
CLN3-206ENST00000360019 ELMOD1Q8N336 334 aa19.22■□□□□ 0.67
CLN3-206ENST00000360019 ALLCQ8N6M5 410 aa19.22■□□□□ 0.67
CLN3-206ENST00000360019 C1orf74Q96LT6 269 aa19.22■□□□□ 0.67
CLN3-206ENST00000360019 TRIM31Q9BZY9 425 aa19.22■□□□□ 0.67
CLN3-206ENST00000360019 PRDM16Q9HAZ2 1276 aa19.22■□□□□ 0.67
CLN3-206ENST00000360019 DTLQ9NZJ0 730 aa19.22■□□□□ 0.67
CLN3-206ENST00000360019 FEZ2Q9UHY8 353 aaPredicted RBP19.22■□□□□ 0.67
CLN3-206ENST00000360019 HCFC2Q9Y5Z7 792 aa19.22■□□□□ 0.67
CLN3-206ENST00000360019 MFSD11O43934 449 aa19.21■□□□□ 0.67
CLN3-206ENST00000360019 SRGAP2BP0DMP2 458 aa19.21■□□□□ 0.67
CLN3-206ENST00000360019 RBP3P10745 1247 aa19.21■□□□□ 0.67
CLN3-206ENST00000360019 MCM3P25205 808 aa19.21■□□□□ 0.67
CLN3-206ENST00000360019 TNFRSF8P28908 595 aa19.21■□□□□ 0.67
CLN3-206ENST00000360019 EPHB2P29323 1055 aa19.21■□□□□ 0.67
CLN3-206ENST00000360019 MLLT6P55198 1093 aaPredicted RBP19.21■□□□□ 0.67
CLN3-206ENST00000360019 CYP4F8P98187 520 aa19.21■□□□□ 0.67
CLN3-206ENST00000360019 PPP1R7Q15435 360 aa19.21■□□□□ 0.67
CLN3-206ENST00000360019 B4GALNT4Q76KP1 1039 aa19.21■□□□□ 0.67
CLN3-206ENST00000360019 C14orf80Q86SX3 495 aa19.21■□□□□ 0.67
CLN3-206ENST00000360019 PRUNE1Q86TP1 453 aa19.21■□□□□ 0.67
CLN3-206ENST00000360019 BTN2A3PQ96KV6 586 aa19.21■□□□□ 0.67
CLN3-206ENST00000360019 SLC22A12Q96S37 553 aa19.21■□□□□ 0.67
CLN3-206ENST00000360019 CORO1BQ9BR76 489 aa19.21■□□□□ 0.67
CLN3-206ENST00000360019 RAB17Q9H0T7 212 aa19.21■□□□□ 0.67
CLN3-206ENST00000360019 DPH5Q9H2P9 285 aa19.21■□□□□ 0.67
CLN3-206ENST00000360019 HCFC1R1Q9NWW0 138 aa19.21■□□□□ 0.67
CLN3-206ENST00000360019 PDE4DIPQ5VU43 2346 aa19.21■□□□□ 0.67
CLN3-206ENST00000360019 CCDC151A5D8V7 595 aa19.21■□□□□ 0.67
CLN3-206ENST00000360019 OLFM2O95897 454 aa19.21■□□□□ 0.67
CLN3-206ENST00000360019 GAS8O95995 478 aa19.21■□□□□ 0.67
CLN3-206ENST00000360019 HOXC13P31276 330 aa19.21■□□□□ 0.67
CLN3-206ENST00000360019 NR2C2P49116 596 aa19.21■□□□□ 0.67
CLN3-206ENST00000360019 CLCN6P51797 869 aa19.21■□□□□ 0.67
CLN3-206ENST00000360019 NRG1Q02297 640 aaPredicted RBP19.21■□□□□ 0.67
CLN3-206ENST00000360019 PTK6Q13882 451 aa19.21■□□□□ 0.67
CLN3-206ENST00000360019 BRD3Q15059 726 aa19.21■□□□□ 0.67
CLN3-206ENST00000360019 PAFAH1B3Q15102 231 aaKnown RBP19.21■□□□□ 0.67
CLN3-206ENST00000360019 MS4A13Q5J8X5 152 aa19.21■□□□□ 0.67
CLN3-206ENST00000360019 TXNDC8Q6A555 127 aa19.21■□□□□ 0.67
CLN3-206ENST00000360019 ATP6V0D2Q8N8Y2 350 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms