RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 DNAJC12Q9UKB3 198 aa17.74■□□□□ 0.43
BRCC3-202ENST00000340647 PCDHGC3Q9UN70 934 aa17.74■□□□□ 0.43
BRCC3-202ENST00000340647 CACNA1EQ15878 2313 aa17.73■□□□□ 0.43
BRCC3-202ENST00000340647 KCNJ18B7U540 433 aa17.73■□□□□ 0.43
BRCC3-202ENST00000340647 CDX4O14627 284 aaPredicted RBP17.73■□□□□ 0.43
BRCC3-202ENST00000340647 CD70P32970 193 aa17.73■□□□□ 0.43
BRCC3-202ENST00000340647 DHPSP49366 369 aaPredicted RBP17.73■□□□□ 0.43
BRCC3-202ENST00000340647 IRX4P78413 519 aa17.73■□□□□ 0.43
BRCC3-202ENST00000340647 SLC47A2Q86VL8 602 aa17.73■□□□□ 0.43
BRCC3-202ENST00000340647 FAM71AQ8IYT1 594 aa17.73■□□□□ 0.43
BRCC3-202ENST00000340647 TUBGCP2Q9BSJ2 902 aa17.73■□□□□ 0.43
BRCC3-202ENST00000340647 NAA15Q9BXJ9 866 aaKnown RBP17.73■□□□□ 0.43
BRCC3-202ENST00000340647 ADAM33Q9BZ11 813 aa17.73■□□□□ 0.43
BRCC3-202ENST00000340647 NUCKS1Q9H1E3 243 aaKnown RBP17.73■□□□□ 0.43
BRCC3-202ENST00000340647 TMEM245Q9H330 911 aa17.73■□□□□ 0.43
BRCC3-202ENST00000340647 PILRBQ9UKJ0 227 aa17.73■□□□□ 0.43
BRCC3-202ENST00000340647 INTS6Q9UL03 887 aaKnown RBP17.73■□□□□ 0.43
BRCC3-202ENST00000340647 FOXD2O60548 495 aaPredicted RBP17.72■□□□□ 0.43
BRCC3-202ENST00000340647 CYBBP04839 570 aa17.72■□□□□ 0.43
BRCC3-202ENST00000340647 HLA-EP13747 358 aa17.72■□□□□ 0.43
BRCC3-202ENST00000340647 ITPKAP23677 461 aa17.72■□□□□ 0.43
BRCC3-202ENST00000340647 ACADSBP45954 432 aa17.72■□□□□ 0.43
BRCC3-202ENST00000340647 RPS24P62847 133 aaKnown RBP17.72■□□□□ 0.43
BRCC3-202ENST00000340647 NNTQ13423 1086 aa17.72■□□□□ 0.43
BRCC3-202ENST00000340647 LPCAT2Q7L5N7 544 aa17.72■□□□□ 0.43
BRCC3-202ENST00000340647 PASD1Q8IV76 773 aa17.72■□□□□ 0.43
BRCC3-202ENST00000340647 C12orf50Q8NA57 414 aaPredicted RBP17.72■□□□□ 0.43
BRCC3-202ENST00000340647 CYB5D2Q8WUJ1 264 aa17.72■□□□□ 0.43
BRCC3-202ENST00000340647 PIGKQ92643 395 aa17.72■□□□□ 0.43
BRCC3-202ENST00000340647 MYO19Q96H55 970 aa17.72■□□□□ 0.43
BRCC3-202ENST00000340647 LHX5Q9H2C1 402 aa17.72■□□□□ 0.43
BRCC3-202ENST00000340647 ABCB8Q9NUT2 735 aa17.72■□□□□ 0.43
BRCC3-202ENST00000340647 CYP8B1Q9UNU6 501 aa17.72■□□□□ 0.43
BRCC3-202ENST00000340647 TLR6Q9Y2C9 796 aa17.72■□□□□ 0.43
BRCC3-202ENST00000340647 FHOD1Q9Y613 1164 aa17.72■□□□□ 0.43
BRCC3-202ENST00000340647 PCNX2A6NKB5 2137 aa17.72■□□□□ 0.43
BRCC3-202ENST00000340647 ATXN2Q99700 1313 aaKnown RBP17.72■□□□□ 0.43
BRCC3-202ENST00000340647 SPEGQ15772 3267 aa17.71■□□□□ 0.43
BRCC3-202ENST00000340647 IRAK2O43187 625 aa17.71■□□□□ 0.43
BRCC3-202ENST00000340647 MED7O43513 233 aa17.71■□□□□ 0.43
BRCC3-202ENST00000340647 TBL1XO60907 577 aa17.71■□□□□ 0.43
BRCC3-202ENST00000340647 ERBB2P04626 1255 aa17.71■□□□□ 0.43
BRCC3-202ENST00000340647 USP8P40818 1118 aa17.71■□□□□ 0.43
BRCC3-202ENST00000340647 EIF4HQ15056 248 aaKnown RBP17.71■□□□□ 0.43
BRCC3-202ENST00000340647 ST3GAL2Q16842 350 aa17.71■□□□□ 0.43
BRCC3-202ENST00000340647 FSCBQ5H9T9 825 aa17.71■□□□□ 0.43
BRCC3-202ENST00000340647 SPDYCQ5MJ68 293 aa17.71■□□□□ 0.43
BRCC3-202ENST00000340647 MPP7Q5T2T1 576 aa17.71■□□□□ 0.43
BRCC3-202ENST00000340647 OTUD1Q5VV17 481 aaPredicted RBP17.71■□□□□ 0.43
BRCC3-202ENST00000340647 NUGGCQ68CJ6 796 aa17.71■□□□□ 0.43
BRCC3-202ENST00000340647 SDE2Q6IQ49 451 aa17.71■□□□□ 0.43
BRCC3-202ENST00000340647 CYP2U1Q7Z449 544 aa17.71■□□□□ 0.43
BRCC3-202ENST00000340647 METTL3Q86U44 580 aaKnown RBP17.71■□□□□ 0.43
BRCC3-202ENST00000340647 UNC45BQ8IWX7 931 aa17.71■□□□□ 0.43
BRCC3-202ENST00000340647 DDX1Q92499 740 aaKnown RBP17.71■□□□□ 0.43
BRCC3-202ENST00000340647 FAM149B1Q96BN6 582 aa17.71■□□□□ 0.43
BRCC3-202ENST00000340647 SPACA7Q96KW9 195 aa17.71■□□□□ 0.43
BRCC3-202ENST00000340647 FAM81BQ96LP2 452 aa17.71■□□□□ 0.43
BRCC3-202ENST00000340647 SLC2A13Q96QE2 648 aa17.71■□□□□ 0.43
BRCC3-202ENST00000340647 PLCB1Q9NQ66 1216 aa17.71■□□□□ 0.43
BRCC3-202ENST00000340647 USP36Q9P275 1121 aaKnown RBP17.71■□□□□ 0.43
BRCC3-202ENST00000340647 FRYQ5TBA9 3013 aa17.7■□□□□ 0.42
BRCC3-202ENST00000340647 DOCK4Q8N1I0 1966 aa17.7■□□□□ 0.42
BRCC3-202ENST00000340647 TRUB2O95900 331 aaKnown RBP17.7■□□□□ 0.42
BRCC3-202ENST00000340647 ZNF445P59923 1031 aa17.7■□□□□ 0.42
BRCC3-202ENST00000340647 YWHAZP63104 245 aaKnown RBP17.7■□□□□ 0.42
BRCC3-202ENST00000340647 KCNJ12Q14500 433 aa17.7■□□□□ 0.42
BRCC3-202ENST00000340647 PTPN20Q4JDL3 420 aa17.7■□□□□ 0.42
BRCC3-202ENST00000340647 ZC3H12AQ5D1E8 599 aaKnown RBP17.7■□□□□ 0.42
BRCC3-202ENST00000340647 TCP11X2Q5H9J9 407 aa17.7■□□□□ 0.42
BRCC3-202ENST00000340647 MS4A13Q5J8X5 152 aa17.7■□□□□ 0.42
BRCC3-202ENST00000340647 KLHDC7AQ5VTJ3 777 aa17.7■□□□□ 0.42
BRCC3-202ENST00000340647 CDKAL1Q5VV42 579 aa17.7■□□□□ 0.42
BRCC3-202ENST00000340647 OLFML1Q6UWY5 402 aa17.7■□□□□ 0.42
BRCC3-202ENST00000340647 MMS22LQ6ZRQ5 1243 aa17.7■□□□□ 0.42
BRCC3-202ENST00000340647 FAM183BPQ6ZVS7 135 aa17.7■□□□□ 0.42
BRCC3-202ENST00000340647 CHST9Q7L1S5 443 aa17.7■□□□□ 0.42
BRCC3-202ENST00000340647 SYT12Q8IV01 421 aa17.7■□□□□ 0.42
BRCC3-202ENST00000340647 ZNF366Q8N895 744 aa17.7■□□□□ 0.42
BRCC3-202ENST00000340647 C1orf131Q8NDD1 294 aaKnown RBP17.7■□□□□ 0.42
BRCC3-202ENST00000340647 ZNF419Q96HQ0 510 aaPredicted RBP17.7■□□□□ 0.42
BRCC3-202ENST00000340647 SERPINB11Q96P15 392 aa17.7■□□□□ 0.42
BRCC3-202ENST00000340647 PRMT1Q99873 361 aaKnown RBP17.7■□□□□ 0.42
BRCC3-202ENST00000340647 EDEM2Q9BV94 578 aa17.7■□□□□ 0.42
BRCC3-202ENST00000340647 LSM14BQ9BX40 385 aaKnown RBP17.7■□□□□ 0.42
BRCC3-202ENST00000340647 CIPCQ9C0C6 399 aa17.7■□□□□ 0.42
BRCC3-202ENST00000340647 POPDC2Q9HBU9 364 aa17.7■□□□□ 0.42
BRCC3-202ENST00000340647 FSCN3Q9NQT6 498 aa17.7■□□□□ 0.42
BRCC3-202ENST00000340647 ITM2CQ9NQX7 267 aa17.7■□□□□ 0.42
BRCC3-202ENST00000340647 EVLQ9UI08 416 aaPredicted RBP17.7■□□□□ 0.42
BRCC3-202ENST00000340647 GGA2Q9UJY4 613 aa17.7■□□□□ 0.42
BRCC3-202ENST00000340647 CHD6Q8TD26 2715 aa17.69■□□□□ 0.42
BRCC3-202ENST00000340647 C4orf47A7E2U8 309 aa17.69■□□□□ 0.42
BRCC3-202ENST00000340647 KCNU1A8MYU2 1149 aa17.69■□□□□ 0.42
BRCC3-202ENST00000340647 I6L893 689 aaPredicted RBP17.69■□□□□ 0.42
BRCC3-202ENST00000340647 NPC1O15118 1278 aa17.69■□□□□ 0.42
BRCC3-202ENST00000340647 MAP3K13O43283 966 aa17.69■□□□□ 0.42
BRCC3-202ENST00000340647 PABPC1P11940 636 aaKnown RBP17.69■□□□□ 0.42
BRCC3-202ENST00000340647 PRKCSHP14314 528 aaPredicted RBP17.69■□□□□ 0.42
BRCC3-202ENST00000340647 ANP32AP39687 249 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms