RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 ZNF786Q8N393 782 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 IL31RAQ8NI17 732 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 SH3GL1Q99961 368 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 POPDC2Q9HBU9 364 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 V9GYQ6 96 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 MYPNQ86TC9 1320 aa17.51■□□□□ 0.39
TRAPPC11-201ENST00000334690 USP1O94782 785 aa17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 FCGR1AP12314 374 aa17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 MYO1HQ8N1T3 1032 aa17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 TMEM237Q96Q45 408 aa17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 GBA2Q9HCG7 927 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 ETNK2Q9NVF9 386 aa17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 CACNA1FO60840 1977 aa17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 RPL22P35268 128 aaKnown RBP17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 CLK1P49759 484 aaKnown RBP17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 MFSD14AQ96MC6 490 aa17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 SERPINB11Q96P15 392 aa17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 NMRK1Q9NWW6 199 aa17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 ANKRD6Q9Y2G4 727 aa17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 A0A0A0MRY4 1105 aa17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 CASTOR2A6NHX0 329 aa17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 RAMP2O60895 175 aa17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 ATP9AO75110 1047 aa17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 LTFP02788 710 aa17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 YBX3P16989 372 aaKnown RBP eCLIP17.5■□□□□ 0.394e-6■■■□□ 15.7
TRAPPC11-201ENST00000334690 S100A5P33763 92 aa17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 RANBP1P43487 201 aa17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 SCARA3Q6AZY7 606 aa17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 ADCK2Q7Z695 626 aa17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 RASGEF1CQ8N431 466 aa17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 PPP2R3CQ969Q6 453 aa17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 SPATA13Q96N96 652 aa17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 ELOVL4Q9GZR5 314 aa17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 RICTORQ6R327 1708 aa17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 ZNF23P17027 643 aa17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 RPA3P35244 121 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 PPP3CCP48454 512 aa17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 PDK4Q16654 411 aa17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 TMCO5AQ8N6Q1 288 aa17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 WNT8BQ93098 351 aa17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 TIMM13Q9Y5L4 95 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC11-201ENST00000334690 VAPBO95292 243 aa17.49■□□□□ 0.39
TRAPPC11-201ENST00000334690 LGALS2P05162 132 aa17.49■□□□□ 0.39
TRAPPC11-201ENST00000334690 TRPC1P48995 793 aa17.49■□□□□ 0.39
TRAPPC11-201ENST00000334690 ZBTB49Q6ZSB9 765 aa17.49■□□□□ 0.39
TRAPPC11-201ENST00000334690 MICU2Q8IYU8 434 aa17.49■□□□□ 0.39
TRAPPC11-201ENST00000334690 RNF157Q96PX1 679 aa17.49■□□□□ 0.39
TRAPPC11-201ENST00000334690 RECQL4O94761 1208 aa17.49■□□□□ 0.39
TRAPPC11-201ENST00000334690 CLPTM1O96005 669 aa17.49■□□□□ 0.39
TRAPPC11-201ENST00000334690 RHOCP08134 193 aa17.49■□□□□ 0.39
TRAPPC11-201ENST00000334690 TPH1P17752 444 aa17.49■□□□□ 0.39
TRAPPC11-201ENST00000334690 ADORA2AP29274 412 aa17.49■□□□□ 0.39
TRAPPC11-201ENST00000334690 CELF3Q5SZQ8 465 aaKnown RBP17.49■□□□□ 0.39
TRAPPC11-201ENST00000334690 PTAR1Q7Z6K3 402 aaPredicted RBP17.49■□□□□ 0.39
TRAPPC11-201ENST00000334690 NMRAL1Q9HBL8 299 aa17.49■□□□□ 0.39
TRAPPC11-201ENST00000334690 KANSL3Q9P2N6 904 aa17.49■□□□□ 0.39
TRAPPC11-201ENST00000334690 SAE1Q9UBE0 346 aaPredicted RBP17.49■□□□□ 0.39
TRAPPC11-201ENST00000334690 TUBGCP4Q9UGJ1 667 aa17.49■□□□□ 0.39
TRAPPC11-201ENST00000334690 UNC5CO95185 931 aa17.49■□□□□ 0.39
TRAPPC11-201ENST00000334690 CAPSQ13938 189 aa17.49■□□□□ 0.39
TRAPPC11-201ENST00000334690 HIST2H2ACQ16777 129 aaPredicted RBP17.49■□□□□ 0.39
TRAPPC11-201ENST00000334690 ATP13A4Q4VNC1 1196 aa17.49■□□□□ 0.39
TRAPPC11-201ENST00000334690 C9orf131Q5VYM1 1079 aa17.49■□□□□ 0.39
TRAPPC11-201ENST00000334690 RNF43Q68DV7 783 aa17.49■□□□□ 0.39
TRAPPC11-201ENST00000334690 IQSEC1Q6DN90 963 aa17.49■□□□□ 0.39
TRAPPC11-201ENST00000334690 HIST2H2AA3Q6FI13 130 aa17.49■□□□□ 0.39
TRAPPC11-201ENST00000334690 TMEM86AQ8N2M4 240 aa17.49■□□□□ 0.39
TRAPPC11-201ENST00000334690 PIWIL2Q8TC59 973 aaKnown RBP17.49■□□□□ 0.39
TRAPPC11-201ENST00000334690 MRPS31Q92665 395 aaKnown RBP17.49■□□□□ 0.39
TRAPPC11-201ENST00000334690 ACSS3Q9H6R3 686 aa17.49■□□□□ 0.39
TRAPPC11-201ENST00000334690 PRDM5Q9NQX1 630 aaPredicted RBP17.49■□□□□ 0.39
TRAPPC11-201ENST00000334690 CNTNAP2Q9UHC6 1331 aa17.49■□□□□ 0.39
TRAPPC11-201ENST00000334690 SPATA31C2B4DYI2 1134 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 MYL4P12829 197 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 MAPK1P28482 360 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 ELF3P78545 371 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 ZNF470Q6ECI4 717 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 CDT1Q9H211 546 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 GPRC5DQ9NZD1 345 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 SYNDIG1LA6NDD5 238 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 DRD4P21917 467 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 ATP6AP1LQ52LC2 224 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 UMODL1Q5DID0 1318 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 FAM117BQ6P1L5 589 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 EXOC3L1Q86VI1 746 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 YAF2Q8IY57 180 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 GPC2Q8N158 579 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 OR5B17Q8NGF7 314 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 GLIS2Q9BZE0 524 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 RMND5AQ9H871 391 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 ARMCX1Q9P291 453 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 hCG_1818297A0A087WSY0 165 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 PDHXO00330 501 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 NR5A2O00482 541 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 CYP2C18P33260 490 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 MMRN1Q13201 1228 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 C15orf59Q2T9L4 293 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 ZFP1Q6P2D0 407 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 KAT2BQ92831 832 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 CDK5RAP1Q96SZ6 601 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms