RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 FRMD8Q9BZ67 464 aaPredicted RBP18.86■□□□□ 0.61
SHISA3-201ENST00000319234 VPS11Q9H270 941 aa18.86■□□□□ 0.61
SHISA3-201ENST00000319234 ETNK1Q9HBU6 452 aa18.86■□□□□ 0.61
SHISA3-201ENST00000319234 SLCO1B3Q9NPD5 702 aa18.86■□□□□ 0.61
SHISA3-201ENST00000319234 CHKBQ9Y259 395 aa18.86■□□□□ 0.61
SHISA3-201ENST00000319234 HEY1Q9Y5J3 304 aa18.86■□□□□ 0.61
SHISA3-201ENST00000319234 PCNTO95613 3336 aa18.86■□□□□ 0.61
SHISA3-201ENST00000319234 M0QYT0 321 aa18.86■□□□□ 0.61
SHISA3-201ENST00000319234 BANF1O75531 89 aa18.86■□□□□ 0.61
SHISA3-201ENST00000319234 TMEM63AO94886 807 aa18.86■□□□□ 0.61
SHISA3-201ENST00000319234 ITGB1P05556 798 aa18.86■□□□□ 0.61
SHISA3-201ENST00000319234 SELPP16109 830 aa18.86■□□□□ 0.61
SHISA3-201ENST00000319234 SEPT7Q16181 437 aaKnown RBP18.86■□□□□ 0.61
SHISA3-201ENST00000319234 NOMO2Q5JPE7 1267 aa18.86■□□□□ 0.61
SHISA3-201ENST00000319234 CLLU1OSQ5K130 101 aa18.86■□□□□ 0.61
SHISA3-201ENST00000319234 LRRC8DQ7L1W4 858 aa18.86■□□□□ 0.61
SHISA3-201ENST00000319234 ZNF784Q8NCA9 323 aaPredicted RBP18.86■□□□□ 0.61
SHISA3-201ENST00000319234 URGCPQ8TCY9 931 aa18.86■□□□□ 0.61
SHISA3-201ENST00000319234 AGAP11Q8TF27 550 aa18.86■□□□□ 0.61
SHISA3-201ENST00000319234 SPOCK2Q92563 424 aa18.86■□□□□ 0.61
SHISA3-201ENST00000319234 TBC1D31Q96DN5 1066 aa18.86■□□□□ 0.61
SHISA3-201ENST00000319234 CSPG4P5Q96PW8 444 aa18.86■□□□□ 0.61
SHISA3-201ENST00000319234 CYTH2Q99418 400 aa18.86■□□□□ 0.61
SHISA3-201ENST00000319234 MAGEB5Q9BZ81 275 aa18.86■□□□□ 0.61
SHISA3-201ENST00000319234 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.86■□□□□ 0.61
SHISA3-201ENST00000319234 PRDM16Q9HAZ2 1276 aa18.86■□□□□ 0.61
SHISA3-201ENST00000319234 USP29Q9HBJ7 922 aa18.86■□□□□ 0.61
SHISA3-201ENST00000319234 NOP53Q9NZM5 478 aaKnown RBP18.86■□□□□ 0.61
SHISA3-201ENST00000319234 RCOR3Q9P2K3 495 aaPredicted RBP18.86■□□□□ 0.61
SHISA3-201ENST00000319234 PCDHB8Q9UN66 801 aa18.86■□□□□ 0.61
SHISA3-201ENST00000319234 BCLAF3A2AJT9 711 aaKnown RBP18.85■□□□□ 0.61
SHISA3-201ENST00000319234 YJEFN3A6XGL0 299 aa18.85■□□□□ 0.61
SHISA3-201ENST00000319234 E7ENQ6 273 aa18.85■□□□□ 0.61
SHISA3-201ENST00000319234 C2CD2LO14523 706 aa18.85■□□□□ 0.61
SHISA3-201ENST00000319234 CAPN9O14815 690 aa18.85■□□□□ 0.61
SHISA3-201ENST00000319234 HNRNPCL1O60812 293 aaKnown RBP18.85■□□□□ 0.61
SHISA3-201ENST00000319234 FYNP06241 537 aa18.85■□□□□ 0.61
SHISA3-201ENST00000319234 CDK7P50613 346 aa18.85■□□□□ 0.61
SHISA3-201ENST00000319234 RASSF2P50749 326 aa18.85■□□□□ 0.61
SHISA3-201ENST00000319234 PITX1P78337 314 aaPredicted RBP18.85■□□□□ 0.61
SHISA3-201ENST00000319234 GAD2Q05329 585 aa18.85■□□□□ 0.61
SHISA3-201ENST00000319234 DEUP1Q05D60 604 aa18.85■□□□□ 0.61
SHISA3-201ENST00000319234 DSC1Q08554 894 aa18.85■□□□□ 0.61
SHISA3-201ENST00000319234 MAPRE1Q15691 268 aaKnown RBP18.85■□□□□ 0.61
SHISA3-201ENST00000319234 SLC45A4Q5BKX6 768 aa18.85■□□□□ 0.61
SHISA3-201ENST00000319234 ZNF280BQ86YH2 543 aa18.85■□□□□ 0.61
SHISA3-201ENST00000319234 BANPQ8N9N5 519 aa18.85■□□□□ 0.61
SHISA3-201ENST00000319234 OR10T2Q8NGX3 314 aa18.85■□□□□ 0.61
SHISA3-201ENST00000319234 RTP4Q96DX8 246 aa18.85■□□□□ 0.61
SHISA3-201ENST00000319234 KANSL3Q9P2N6 904 aa18.85■□□□□ 0.61
SHISA3-201ENST00000319234 IQANK1A0A1B0GTG1 560 aa18.84■□□□□ 0.61
SHISA3-201ENST00000319234 DDHD2O94830 711 aa18.84■□□□□ 0.61
SHISA3-201ENST00000319234 ZBED1O96006 694 aa18.84■□□□□ 0.61
SHISA3-201ENST00000319234 USP17L7P0C7H9 530 aa18.84■□□□□ 0.61
SHISA3-201ENST00000319234 TROVE2P10155 538 aaKnown RBP eCLIP18.84■□□□□ 0.61
SHISA3-201ENST00000319234 COL6A1P12109 1028 aa18.84■□□□□ 0.61
SHISA3-201ENST00000319234 BDNFP23560 247 aa18.84■□□□□ 0.61
SHISA3-201ENST00000319234 ELF1P32519 619 aa18.84■□□□□ 0.61
SHISA3-201ENST00000319234 ARL4AP40617 200 aa18.84■□□□□ 0.61
SHISA3-201ENST00000319234 NR2C2P49116 596 aa18.84■□□□□ 0.61
SHISA3-201ENST00000319234 TSPY1Q01534 308 aa18.84■□□□□ 0.61
SHISA3-201ENST00000319234 EFTUD2Q15029 972 aaKnown RBP eCLIP18.84■□□□□ 0.61
SHISA3-201ENST00000319234 BBS9Q3SYG4 887 aa18.84■□□□□ 0.61
SHISA3-201ENST00000319234 TLDC1Q6P9B6 456 aa18.84■□□□□ 0.61
SHISA3-201ENST00000319234 OTOAQ7RTW8 1153 aa18.84■□□□□ 0.61
SHISA3-201ENST00000319234 MRRFQ96E11 262 aaKnown RBP18.84■□□□□ 0.61
SHISA3-201ENST00000319234 RHOBTB2Q9BYZ6 727 aa18.84■□□□□ 0.61
SHISA3-201ENST00000319234 TMLHEQ9NVH6 421 aa18.84■□□□□ 0.61
SHISA3-201ENST00000319234 RRN3Q9NYV6 651 aa18.84■□□□□ 0.61
SHISA3-201ENST00000319234 TSC2P49815 1807 aa18.84■□□□□ 0.61
SHISA3-201ENST00000319234 FRMPD3Q5JV73 1810 aa18.84■□□□□ 0.61
SHISA3-201ENST00000319234 TCRBV7S3A2A0A539 114 aa18.84■□□□□ 0.61
SHISA3-201ENST00000319234 CHADO15335 359 aa18.84■□□□□ 0.61
SHISA3-201ENST00000319234 BASP1P80723 227 aaKnown RBP18.84■□□□□ 0.61
SHISA3-201ENST00000319234 LRRTM3Q86VH5 581 aa18.84■□□□□ 0.61
SHISA3-201ENST00000319234 CDKL3Q8IVW4 592 aaPredicted RBP18.84■□□□□ 0.61
SHISA3-201ENST00000319234 COLGALT2Q8IYK4 626 aa18.84■□□□□ 0.61
SHISA3-201ENST00000319234 IRGQQ8WZA9 623 aa18.84■□□□□ 0.61
SHISA3-201ENST00000319234 SLC9A7Q96T83 725 aa18.84■□□□□ 0.61
SHISA3-201ENST00000319234 DMAP1Q9NPF5 467 aaPredicted RBP18.84■□□□□ 0.61
SHISA3-201ENST00000319234 STK38LQ9Y2H1 464 aa18.84■□□□□ 0.61
SHISA3-201ENST00000319234 USP3Q9Y6I4 520 aa18.84■□□□□ 0.61
SHISA3-201ENST00000319234 SYNJ2BP-COX16A0A087WUM0 186 aa18.83■□□□□ 0.61
SHISA3-201ENST00000319234 F8W810 466 aa18.83■□□□□ 0.61
SHISA3-201ENST00000319234 TMEM189-UBE2V1I3L0A0 370 aa18.83■□□□□ 0.61
SHISA3-201ENST00000319234 TRAFD1O14545 582 aaPredicted RBP18.83■□□□□ 0.61
SHISA3-201ENST00000319234 KCNN4O15554 427 aa18.83■□□□□ 0.61
SHISA3-201ENST00000319234 B4GALT3O60512 393 aa18.83■□□□□ 0.61
SHISA3-201ENST00000319234 LTFP02788 710 aa18.83■□□□□ 0.61
SHISA3-201ENST00000319234 RBL1P28749 1068 aa18.83■□□□□ 0.61
SHISA3-201ENST00000319234 NME3Q13232 169 aa18.83■□□□□ 0.61
SHISA3-201ENST00000319234 BFSP2Q13515 415 aa18.83■□□□□ 0.61
SHISA3-201ENST00000319234 KCNJ11Q14654 390 aa18.83■□□□□ 0.61
SHISA3-201ENST00000319234 SCML4Q8N228 414 aa18.83■□□□□ 0.61
SHISA3-201ENST00000319234 PYROXD2Q8N2H3 581 aa18.83■□□□□ 0.61
SHISA3-201ENST00000319234 SLC7A14Q8TBB6 771 aa18.83■□□□□ 0.61
SHISA3-201ENST00000319234 STAMBPL1Q96FJ0 436 aa18.83■□□□□ 0.61
SHISA3-201ENST00000319234 TMEM209Q96SK2 561 aa18.83■□□□□ 0.61
SHISA3-201ENST00000319234 PNPLA8Q9NP80 782 aa18.83■□□□□ 0.61
SHISA3-201ENST00000319234 SAR1AQ9NR31 198 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms