RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 BEST2Q8NFU1 509 aa15.69■□□□□ 0.1
DDX56-201ENST00000258772 PIWIL2Q8TC59 973 aaKnown RBP15.69■□□□□ 0.1
DDX56-201ENST00000258772 ARNTL2Q8WYA1 636 aa15.69■□□□□ 0.1
DDX56-201ENST00000258772 CDKL2Q92772 493 aa15.69■□□□□ 0.1
DDX56-201ENST00000258772 SNX27Q96L92 541 aa15.69■□□□□ 0.1
DDX56-201ENST00000258772 THTPAQ9BU02 230 aa15.69■□□□□ 0.1
DDX56-201ENST00000258772 XPNPEP3Q9NQH7 507 aa15.69■□□□□ 0.1
DDX56-201ENST00000258772 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.69■□□□□ 0.1
DDX56-201ENST00000258772 SORCS3Q9UPU3 1222 aa15.69■□□□□ 0.1
DDX56-201ENST00000258772 ZNF638Q14966 1978 aaKnown RBP15.69■□□□□ 0.1
DDX56-201ENST00000258772 ITM2AO43736 263 aa15.69■□□□□ 0.1
DDX56-201ENST00000258772 FGF3P11487 239 aaPredicted RBP15.69■□□□□ 0.1
DDX56-201ENST00000258772 SKIP12755 728 aa15.69■□□□□ 0.1
DDX56-201ENST00000258772 RPL10AP62906 217 aaKnown RBP15.69■□□□□ 0.1
DDX56-201ENST00000258772 PDE1CQ14123 709 aaPredicted RBP15.69■□□□□ 0.1
DDX56-201ENST00000258772 UBAP2LQ14157 1087 aaKnown RBP15.69■□□□□ 0.1
DDX56-201ENST00000258772 DNAL1Q4LDG9 190 aa15.69■□□□□ 0.1
DDX56-201ENST00000258772 TEDDM1Q5T9Z0 273 aa15.69■□□□□ 0.1
DDX56-201ENST00000258772 IRGCQ6NXR0 463 aa15.69■□□□□ 0.1
DDX56-201ENST00000258772 STRADAQ7RTN6 431 aa15.69■□□□□ 0.1
DDX56-201ENST00000258772 ULK2Q8IYT8 1036 aa15.69■□□□□ 0.1
DDX56-201ENST00000258772 CRYBG2Q8N1P7 616 aa15.69■□□□□ 0.1
DDX56-201ENST00000258772 PPFIBP2Q8ND30 876 aa15.69■□□□□ 0.1
DDX56-201ENST00000258772 CLPTM1LQ96KA5 538 aa15.69■□□□□ 0.1
DDX56-201ENST00000258772 ZNF778Q96MU6 729 aa15.69■□□□□ 0.1
DDX56-201ENST00000258772 SYT15Q9BQS2 421 aa15.69■□□□□ 0.1
DDX56-201ENST00000258772 SIKE1Q9BRV8 207 aa15.69■□□□□ 0.1
DDX56-201ENST00000258772 APOL6Q9BWW8 343 aa15.69■□□□□ 0.1
DDX56-201ENST00000258772 C1orf21Q9H246 121 aa15.69■□□□□ 0.1
DDX56-201ENST00000258772 RNF19AQ9NV58 838 aa15.69■□□□□ 0.1
DDX56-201ENST00000258772 HES2Q9Y543 173 aa15.69■□□□□ 0.1
DDX56-201ENST00000258772 WASF2Q9Y6W5 498 aa15.69■□□□□ 0.1
DDX56-201ENST00000258772 RALGAPA2Q2PPJ7 1873 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 TPP1O14773 563 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 PLIN3O60664 434 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 GLRA3O75311 464 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 LYPLA1O75608 230 aaPredicted RBP15.68■□□□□ 0.1
DDX56-201ENST00000258772 UPP2O95045 317 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 LMO2P25791 158 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 MGAT1P26572 445 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 SLC1A6P48664 564 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 SESN2P58004 480 aaPredicted RBP15.68■□□□□ 0.1
DDX56-201ENST00000258772 LBRQ14739 615 aaKnown RBP15.68■□□□□ 0.1
DDX56-201ENST00000258772 ZRSR2Q15696 482 aaKnown RBP15.68■□□□□ 0.1
DDX56-201ENST00000258772 GRIK4Q16099 956 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 KIZQ2M2Z5 673 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 TRMT5Q32P41 509 aaKnown RBP15.68■□□□□ 0.1
DDX56-201ENST00000258772 GLRA4Q5JXX5 417 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 C9orf57Q5W0N0 161 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 CCNJLQ8IV13 435 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 PANX3Q96QZ0 392 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 EIF2AQ9BY44 585 aaKnown RBP15.68■□□□□ 0.1
DDX56-201ENST00000258772 PIH1D1Q9NWS0 290 aaKnown RBP15.68■□□□□ 0.1
DDX56-201ENST00000258772 DCDC2Q9UHG0 476 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 FZD10Q9ULW2 581 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 DNAJC16Q9Y2G8 782 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 AOC1P19801 751 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 GNL1P36915 607 aaPredicted RBP15.68■□□□□ 0.1
DDX56-201ENST00000258772 MATKP42679 507 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 ACADSBP45954 432 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 ACTR3P61158 418 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 PPIL2Q13356 520 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 TUBB3Q13509 450 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 TMEM154Q6P9G4 183 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 SLC27A1Q6PCB7 646 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 RIPOR1Q6ZS17 1223 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 FAM131BQ86XD5 332 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 KBTBD7Q8WVZ9 684 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 ATP2A3Q93084 1043 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 EMID1Q96A84 441 aaPredicted RBP15.68■□□□□ 0.1
DDX56-201ENST00000258772 P2RY11Q96G91 374 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 EIF2B3Q9NR50 452 aaKnown RBP15.68■□□□□ 0.1
DDX56-201ENST00000258772 KRT82Q9NSB4 513 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 SLC7A8Q9UHI5 535 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 GINS2Q9Y248 185 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 PSAT1Q9Y617 370 aa15.68■□□□□ 0.1
DDX56-201ENST00000258772 MFSD11O43934 449 aa15.67■□□□□ 0.1
DDX56-201ENST00000258772 CIB2O75838 187 aa15.67■□□□□ 0.1
DDX56-201ENST00000258772 ITGA2BP08514 1039 aa15.67■□□□□ 0.1
DDX56-201ENST00000258772 PGAM1P18669 254 aa15.67■□□□□ 0.1
DDX56-201ENST00000258772 ADCYAP1R1P41586 468 aa15.67■□□□□ 0.1
DDX56-201ENST00000258772 TUBP50607 506 aa15.67■□□□□ 0.1
DDX56-201ENST00000258772 C6orf163Q5TEZ5 329 aa15.67■□□□□ 0.1
DDX56-201ENST00000258772 ALKAL1Q6UXT8 129 aa15.67■□□□□ 0.1
DDX56-201ENST00000258772 FASTKD5Q7L8L6 764 aaKnown RBP15.67■□□□□ 0.1
DDX56-201ENST00000258772 NETO2Q8NC67 525 aa15.67■□□□□ 0.1
DDX56-201ENST00000258772 SHCBP1Q8NEM2 672 aa15.67■□□□□ 0.1
DDX56-201ENST00000258772 UCMAQ8WVF2 138 aa15.67■□□□□ 0.1
DDX56-201ENST00000258772 HSFY1Q96LI6 401 aa15.67■□□□□ 0.1
DDX56-201ENST00000258772 RCOR3Q9P2K3 495 aaPredicted RBP15.67■□□□□ 0.1
DDX56-201ENST00000258772 GJD2Q9UKL4 321 aa15.67■□□□□ 0.1
DDX56-201ENST00000258772 RBM47A0AV96 593 aaKnown RBP15.67■□□□□ 0.1
DDX56-201ENST00000258772 RNF103O00237 685 aa15.67■□□□□ 0.1
DDX56-201ENST00000258772 MAP3K7O43318 606 aa15.67■□□□□ 0.1
DDX56-201ENST00000258772 OPHN1O60890 802 aa15.67■□□□□ 0.1
DDX56-201ENST00000258772 DDNO94850 711 aaPredicted RBP15.67■□□□□ 0.1
DDX56-201ENST00000258772 MXRA7P84157 204 aa15.67■□□□□ 0.1
DDX56-201ENST00000258772 PDE1BQ01064 536 aa15.67■□□□□ 0.1
DDX56-201ENST00000258772 TMEM62Q0P6H9 643 aa15.67■□□□□ 0.1
DDX56-201ENST00000258772 PCLAFQ15004 111 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms