RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 CMTM8Q8IZV2 173 aa6.77□□□□□ -1.33
RTTN-215ENST00000639487 FBXO15Q8NCQ5 510 aaPredicted RBP6.77□□□□□ -1.33
RTTN-215ENST00000639487 KREMEN2Q8NCW0 462 aa6.77□□□□□ -1.33
RTTN-215ENST00000639487 LSM14AQ8ND56 463 aaKnown RBP6.77□□□□□ -1.33
RTTN-215ENST00000639487 FUBP1Q96AE4 644 aaKnown RBP6.77□□□□□ -1.33
RTTN-215ENST00000639487 AGPAT1Q99943 283 aa6.77□□□□□ -1.33
RTTN-215ENST00000639487 HAUS2Q9NVX0 235 aa6.77□□□□□ -1.33
RTTN-215ENST00000639487 WDR70Q9NW82 654 aa6.77□□□□□ -1.33
RTTN-215ENST00000639487 KLF15Q9UIH9 416 aa6.77□□□□□ -1.33
RTTN-215ENST00000639487 CORO1CQ9ULV4 474 aaPredicted RBP6.77□□□□□ -1.33
RTTN-215ENST00000639487 DMTF1Q9Y222 760 aa6.77□□□□□ -1.33
RTTN-215ENST00000639487 COMMD10Q9Y6G5 202 aa6.77□□□□□ -1.33
RTTN-215ENST00000639487 KIF2AO00139 706 aaPredicted RBP6.77□□□□□ -1.33
RTTN-215ENST00000639487 LATO43561 262 aa6.77□□□□□ -1.33
RTTN-215ENST00000639487 SEC24AO95486 1093 aa6.77□□□□□ -1.33
RTTN-215ENST00000639487 GYPCP04921 128 aa6.77□□□□□ -1.33
RTTN-215ENST00000639487 TKTP29401 623 aaKnown RBP6.77□□□□□ -1.33
RTTN-215ENST00000639487 MRPL19P49406 292 aaKnown RBP6.77□□□□□ -1.33
RTTN-215ENST00000639487 CDK16Q00536 496 aa6.77□□□□□ -1.33
RTTN-215ENST00000639487 GALNT2Q10471 571 aa6.77□□□□□ -1.33
RTTN-215ENST00000639487 PDCLQ13371 301 aa6.77□□□□□ -1.33
RTTN-215ENST00000639487 ORC1Q13415 861 aa6.77□□□□□ -1.33
RTTN-215ENST00000639487 MSLNQ13421 630 aaPredicted RBP6.77□□□□□ -1.33
RTTN-215ENST00000639487 IFI16Q16666 785 aaKnown RBP6.77□□□□□ -1.33
RTTN-215ENST00000639487 WDR44Q5JSH3 913 aa6.77□□□□□ -1.33
RTTN-215ENST00000639487 AGAP9Q5VTM2 703 aa6.77□□□□□ -1.33
RTTN-215ENST00000639487 CPA6Q8N4T0 437 aa6.77□□□□□ -1.33
RTTN-215ENST00000639487 TC2NQ8N9U0 490 aa6.77□□□□□ -1.33
RTTN-215ENST00000639487 NKD2Q969F2 451 aaPredicted RBP6.77□□□□□ -1.33
RTTN-215ENST00000639487 ACDQ96AP0 544 aa6.77□□□□□ -1.33
RTTN-215ENST00000639487 TMEM169Q96HH4 297 aa6.77□□□□□ -1.33
RTTN-215ENST00000639487 LINC00615Q96LM1 132 aaPredicted RBP6.77□□□□□ -1.33
RTTN-215ENST00000639487 ZNF641Q96N77 438 aaPredicted RBP6.77□□□□□ -1.33
RTTN-215ENST00000639487 ABHD10Q9NUJ1 306 aa6.77□□□□□ -1.33
RTTN-215ENST00000639487 TNFRSF10AO00220 468 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 EIF3HO15372 352 aaKnown RBP eCLIP6.76□□□□□ -1.33
RTTN-215ENST00000639487 MLNP12872 115 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 GNL1P36915 607 aaPredicted RBP6.76□□□□□ -1.33
RTTN-215ENST00000639487 COG7P83436 770 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 MPPE1Q53F39 396 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 PAPD7Q5XG87 772 aaKnown RBP6.76□□□□□ -1.33
RTTN-215ENST00000639487 CKAP2LQ8IYA6 745 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 GOLGA6L1Q8N7Z2 621 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 DCAF4L2Q8NA75 395 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 TDRD5Q8NAT2 981 aaKnown RBP6.76□□□□□ -1.33
RTTN-215ENST00000639487 MYLPFQ96A32 169 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 THOC1Q96FV9 657 aaKnown RBP6.76□□□□□ -1.33
RTTN-215ENST00000639487 MRGPRX3Q96LB0 322 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 MYADMQ96S97 322 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 FTOQ9C0B1 505 aaKnown RBP eCLIP6.76□□□□□ -1.33
RTTN-215ENST00000639487 PARVAQ9NVD7 372 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 TRANK1O15050 2925 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 TRAV19A0A0A6YYK7 116 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 NPHP3-ACAD11A0A0J9YXS1 232 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 LCHNA4D1U4 455 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 TMEM8BA6NDV4 472 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 SFI1A8K8P3 1242 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 PCDH17O14917 1159 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 NFATC1O95644 943 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 KIR2DL1P43626 348 aaPredicted RBP6.76□□□□□ -1.33
RTTN-215ENST00000639487 TNNC1P63316 161 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 DBN1Q16643 649 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 ZC2HC1CQ53FD0 456 aaPredicted RBP6.76□□□□□ -1.33
RTTN-215ENST00000639487 TCEAL5Q5H9L2 206 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 TWF2Q6IBS0 349 aaKnown RBP6.76□□□□□ -1.33
RTTN-215ENST00000639487 WASH2PQ6VEQ5 465 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 SLC36A4Q6YBV0 504 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 THADAQ6YHU6 1953 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 ELMOD1Q8N336 334 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 AVL9Q8NBF6 648 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 TMEM35BQ8NCS4 154 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 RNF214Q8ND24 703 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 EXD1Q8NHP7 514 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 ACTRT1Q8TDG2 376 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 RPGRIP1Q96KN7 1286 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 ZIM3Q96PE6 472 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 IL12RB2Q99665 862 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 SLX1AQ9BQ83 275 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 CNPY3Q9BT09 278 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 RSPH9Q9H1X1 276 aaPredicted RBP6.76□□□□□ -1.33
RTTN-215ENST00000639487 WASH6PQ9NQA3 447 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 IP6K2Q9UHH9 426 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 DNMT3LQ9UJW3 386 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 GDAQ9Y2T3 454 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 JRKLQ9Y4A0 524 aa6.76□□□□□ -1.33
RTTN-215ENST00000639487 MN1Q10571 1320 aaPredicted RBP6.75□□□□□ -1.33
RTTN-215ENST00000639487 hCG_1642624A0A1W2PR95 340 aa6.75□□□□□ -1.33
RTTN-215ENST00000639487 PRPF6O94906 941 aaKnown RBP6.75□□□□□ -1.33
RTTN-215ENST00000639487 CA3P07451 260 aa6.75□□□□□ -1.33
RTTN-215ENST00000639487 SP100P23497 879 aaPredicted RBP6.75□□□□□ -1.33
RTTN-215ENST00000639487 FSHRP23945 695 aa6.75□□□□□ -1.33
RTTN-215ENST00000639487 RDXP35241 583 aaKnown RBP6.75□□□□□ -1.33
RTTN-215ENST00000639487 PEX19P40855 299 aa6.75□□□□□ -1.33
RTTN-215ENST00000639487 RXRGP48443 463 aa6.75□□□□□ -1.33
RTTN-215ENST00000639487 PCYT1AP49585 367 aa6.75□□□□□ -1.33
RTTN-215ENST00000639487 RENBPP51606 427 aa6.75□□□□□ -1.33
RTTN-215ENST00000639487 GOLGA8FQ08AF8 430 aa6.75□□□□□ -1.33
RTTN-215ENST00000639487 GOLGA8DPQ0D2H9 430 aa6.75□□□□□ -1.33
RTTN-215ENST00000639487 ZNF394Q53GI3 561 aa6.75□□□□□ -1.33
RTTN-215ENST00000639487 FAM47CQ5HY64 1035 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms