RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 CCDC106Q9BWC9 280 aa12.17□□□□□ -0.46
C11orf54-215ENST00000617482 STX18Q9P2W9 335 aaKnown RBP12.17□□□□□ -0.46
C11orf54-215ENST00000617482 TAGLN3Q9UI15 199 aa12.17□□□□□ -0.46
C11orf54-215ENST00000617482 PAPPA2Q9BXP8 1791 aa12.17□□□□□ -0.46
C11orf54-215ENST00000617482 E2F8A0AVK6 867 aa12.17□□□□□ -0.46
C11orf54-215ENST00000617482 SPECC1L-ADORA2AF8WAN1 911 aa12.17□□□□□ -0.46
C11orf54-215ENST00000617482 NPTXRO95502 500 aa12.17□□□□□ -0.46
C11orf54-215ENST00000617482 GSTA2P09210 222 aa12.17□□□□□ -0.46
C11orf54-215ENST00000617482 VAV1P15498 845 aa12.17□□□□□ -0.46
C11orf54-215ENST00000617482 TPSB2P20231 275 aa12.17□□□□□ -0.46
C11orf54-215ENST00000617482 GMPRP36959 345 aa12.17□□□□□ -0.46
C11orf54-215ENST00000617482 TPSAB1Q15661 275 aa12.17□□□□□ -0.46
C11orf54-215ENST00000617482 FAM91A1Q658Y4 838 aa12.17□□□□□ -0.46
C11orf54-215ENST00000617482 SCUBE1Q8IWY4 988 aa12.17□□□□□ -0.46
C11orf54-215ENST00000617482 TTC39CQ8N584 583 aa12.17□□□□□ -0.46
C11orf54-215ENST00000617482 HTR3CQ8WXA8 447 aa12.17□□□□□ -0.46
C11orf54-215ENST00000617482 APBB2Q92870 758 aa12.17□□□□□ -0.46
C11orf54-215ENST00000617482 XAB2Q9HCS7 855 aaKnown RBP12.17□□□□□ -0.46
C11orf54-215ENST00000617482 THAP1Q9NVV9 213 aa12.17□□□□□ -0.46
C11orf54-215ENST00000617482 MKS1Q9NXB0 559 aa12.17□□□□□ -0.46
C11orf54-215ENST00000617482 SYNJ2BP-COX16A0A087WUM0 186 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 SPDYE5A6NIY4 337 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 TPP1O14773 563 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 BIRC5O15392 142 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 GSRP00390 522 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 ALDOAP04075 364 aaKnown RBP12.16□□□□□ -0.46
C11orf54-215ENST00000617482 LMO2P25791 158 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 SERPINB9P50453 376 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 RAP1GDS1P52306 607 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 MRPS35P82673 323 aaKnown RBP12.16□□□□□ -0.46
C11orf54-215ENST00000617482 SEMA5AQ13591 1074 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 KIZQ2M2Z5 673 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 CMPK2Q5EBM0 449 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 N4BP2L1Q5TBK1 243 aaPredicted RBP12.16□□□□□ -0.46
C11orf54-215ENST00000617482 NCBP2-AS2Q69YL0 99 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 MTHFD1LQ6UB35 978 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 CES3Q6UWW8 571 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 C4orf22Q6V702 233 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 ARMCX2Q7L311 632 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 FAM131BQ86XD5 332 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 SLC25A41Q8N5S1 370 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 LINC01465Q8N7H1 131 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 CFAP61Q8NHU2 1237 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 PPP1R13LQ8WUF5 828 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 TFB1MQ8WVM0 346 aaKnown RBP12.16□□□□□ -0.46
C11orf54-215ENST00000617482 FAM136AQ96C01 138 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 PGLYRP2Q96PD5 576 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 QKIQ96PU8 341 aaKnown RBP eCLIP12.16□□□□□ -0.466e-11■■■■■ 40.2
C11orf54-215ENST00000617482 PANX3Q96QZ0 392 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 TMPRSS4Q9NRS4 437 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 COX16Q9P0S2 106 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 SEPT10Q9P0V9 454 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 DLGAP2Q9P1A6 1054 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 PSAT1Q9Y617 370 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 MCM3APO60318 1980 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 LTBP3Q9NS15 1303 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 MEI4A8MW99 385 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 MAGEC1O60732 1142 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 STAU1O95793 577 aaKnown RBP12.16□□□□□ -0.46
C11orf54-215ENST00000617482 ZFXP17010 805 aaPredicted RBP12.16□□□□□ -0.46
C11orf54-215ENST00000617482 MGAT1P26572 445 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 NR2C2P49116 596 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 SARNPP82979 210 aaKnown RBP12.16□□□□□ -0.46
C11orf54-215ENST00000617482 AP1B1Q10567 949 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 PDE1CQ14123 709 aaPredicted RBP12.16□□□□□ -0.46
C11orf54-215ENST00000617482 KYAT1Q16773 422 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 RIPOR1Q6ZS17 1223 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 ULK2Q8IYT8 1036 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 COLGALT1Q8NBJ5 622 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 PPFIBP2Q8ND30 876 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 SHKBP1Q8TBC3 707 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 ZNF778Q96MU6 729 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 EMCNQ9ULC0 261 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 PLA2G4CQ9UP65 541 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 DNAJC16Q9Y2G8 782 aa12.16□□□□□ -0.46
C11orf54-215ENST00000617482 SDR42E2A6NKP2 422 aa12.15□□□□□ -0.46
C11orf54-215ENST00000617482 ENO4A6NNW6 628 aa12.15□□□□□ -0.46
C11orf54-215ENST00000617482 TM7SF2O76062 418 aa12.15□□□□□ -0.46
C11orf54-215ENST00000617482 BAG2O95816 211 aa12.15□□□□□ -0.46
C11orf54-215ENST00000617482 SERPINA6P08185 405 aa12.15□□□□□ -0.46
C11orf54-215ENST00000617482 C6orf222P0C671 652 aaPredicted RBP12.15□□□□□ -0.46
C11orf54-215ENST00000617482 SKIP12755 728 aa12.15□□□□□ -0.46
C11orf54-215ENST00000617482 PTPN9P43378 593 aa12.15□□□□□ -0.46
C11orf54-215ENST00000617482 LAMC2Q13753 1193 aa12.15□□□□□ -0.46
C11orf54-215ENST00000617482 PPM1JQ5JR12 505 aa12.15□□□□□ -0.46
C11orf54-215ENST00000617482 TIFABQ6ZNK6 161 aa12.15□□□□□ -0.46
C11orf54-215ENST00000617482 KBTBD2Q8IY47 623 aa12.15□□□□□ -0.46
C11orf54-215ENST00000617482 CENPIQ92674 756 aaPredicted RBP12.15□□□□□ -0.46
C11orf54-215ENST00000617482 TTC1Q99614 292 aa12.15□□□□□ -0.46
C11orf54-215ENST00000617482 C11orf84Q9BUA3 381 aaPredicted RBP12.15□□□□□ -0.46
C11orf54-215ENST00000617482 EIF2AQ9BY44 585 aaKnown RBP12.15□□□□□ -0.46
C11orf54-215ENST00000617482 XPNPEP3Q9NQH7 507 aa12.15□□□□□ -0.46
C11orf54-215ENST00000617482 KRT82Q9NSB4 513 aa12.15□□□□□ -0.46
C11orf54-215ENST00000617482 SLC7A8Q9UHI5 535 aa12.15□□□□□ -0.46
C11orf54-215ENST00000617482 LRCH1Q9Y2L9 728 aa12.15□□□□□ -0.46
C11orf54-215ENST00000617482 PTPRFP10586 1907 aa12.15□□□□□ -0.46
C11orf54-215ENST00000617482 MAP3K7O43318 606 aa12.15□□□□□ -0.47
C11orf54-215ENST00000617482 CIB2O75838 187 aa12.15□□□□□ -0.47
C11orf54-215ENST00000617482 DDNO94850 711 aaPredicted RBP12.15□□□□□ -0.47
C11orf54-215ENST00000617482 SETSIPP0DME0 302 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 208.8 ms