RNA–Protein interactions for RNA: ENST00000602319.1

HCG18-242, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 3,342 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-242ENST00000602319 SPATA18Q8TC71 538 aa10.2□□□□□ -0.78
HCG18-242ENST00000602319 CNKSR2Q8WXI2 1034 aa10.2□□□□□ -0.78
HCG18-242ENST00000602319 FAF2Q96CS3 445 aa10.2□□□□□ -0.78
HCG18-242ENST00000602319 PEBP4Q96S96 227 aa10.2□□□□□ -0.78
HCG18-242ENST00000602319 MMP19Q99542 508 aa10.2□□□□□ -0.78
HCG18-242ENST00000602319 CCT7Q99832 543 aa10.2□□□□□ -0.78
HCG18-242ENST00000602319 MRPL1Q9BYD6 325 aaKnown RBP10.2□□□□□ -0.78
HCG18-242ENST00000602319 PLGRKTQ9HBL7 147 aa10.2□□□□□ -0.78
HCG18-242ENST00000602319 AGO2Q9UKV8 859 aaKnown RBP10.2□□□□□ -0.78
HCG18-242ENST00000602319 PCDHB12Q9Y5F1 795 aa10.2□□□□□ -0.78
HCG18-242ENST00000602319 PTPRFP10586 1907 aa10.19□□□□□ -0.78
HCG18-242ENST00000602319 TXNDC9O14530 226 aa10.19□□□□□ -0.78
HCG18-242ENST00000602319 MAGEA10P43363 369 aaPredicted RBP10.19□□□□□ -0.78
HCG18-242ENST00000602319 CACNB3P54284 484 aa10.19□□□□□ -0.78
HCG18-242ENST00000602319 ABCE1P61221 599 aaKnown RBP10.19□□□□□ -0.78
HCG18-242ENST00000602319 SMTNL2Q2TAL5 461 aa10.19□□□□□ -0.78
HCG18-242ENST00000602319 FSCBQ5H9T9 825 aa10.19□□□□□ -0.78
HCG18-242ENST00000602319 GPAT2Q6NUI2 795 aa10.19□□□□□ -0.78
HCG18-242ENST00000602319 DARS2Q6PI48 645 aaKnown RBP10.19□□□□□ -0.78
HCG18-242ENST00000602319 PACS1Q6VY07 963 aa10.19□□□□□ -0.78
HCG18-242ENST00000602319 SEPT12Q8IYM1 358 aa10.19□□□□□ -0.78
HCG18-242ENST00000602319 MCPH1Q8NEM0 835 aa10.19□□□□□ -0.78
HCG18-242ENST00000602319 TFAP2BQ92481 460 aa10.19□□□□□ -0.78
HCG18-242ENST00000602319 MASTLQ96GX5 879 aa10.19□□□□□ -0.78
HCG18-242ENST00000602319 UHRF1Q96T88 793 aaPredicted RBP10.19□□□□□ -0.78
HCG18-242ENST00000602319 SH2D3AQ9BRG2 576 aa10.19□□□□□ -0.78
HCG18-242ENST00000602319 INIPQ9NRY2 104 aa10.19□□□□□ -0.78
HCG18-242ENST00000602319 PNPOQ9NVS9 261 aa10.19□□□□□ -0.78
HCG18-242ENST00000602319 SERPINA10Q9UK55 444 aa10.19□□□□□ -0.78
HCG18-242ENST00000602319 CCNL1Q9UK58 526 aaPredicted RBP10.19□□□□□ -0.78
HCG18-242ENST00000602319 ZBTB12Q9Y330 459 aaPredicted RBP10.19□□□□□ -0.78
HCG18-242ENST00000602319 SPDYE16A6NNV3 312 aaPredicted RBP10.19□□□□□ -0.78
HCG18-242ENST00000602319 ACOT8O14734 319 aa10.19□□□□□ -0.78
HCG18-242ENST00000602319 BCAS2O75934 225 aaPredicted RBP10.19□□□□□ -0.78
HCG18-242ENST00000602319 TOP3BO95985 862 aaKnown RBP10.19□□□□□ -0.78
HCG18-242ENST00000602319 LDHAP00338 332 aaKnown RBP10.19□□□□□ -0.78
HCG18-242ENST00000602319 TNNI1P19237 187 aa10.19□□□□□ -0.78
HCG18-242ENST00000602319 TGM2P21980 687 aa10.19□□□□□ -0.78
HCG18-242ENST00000602319 YY1P25490 414 aa10.19□□□□□ -0.78
HCG18-242ENST00000602319 TCP10Q12799 353 aa10.19□□□□□ -0.78
HCG18-242ENST00000602319 PDE1CQ14123 709 aaPredicted RBP10.19□□□□□ -0.78
HCG18-242ENST00000602319 BTG3Q14201 252 aaPredicted RBP10.19□□□□□ -0.78
HCG18-242ENST00000602319 SCARA3Q6AZY7 606 aa10.19□□□□□ -0.78
HCG18-242ENST00000602319 C16orf46Q6P387 395 aa10.19□□□□□ -0.78
HCG18-242ENST00000602319 C16orf89Q6UX73 402 aa10.19□□□□□ -0.78
HCG18-242ENST00000602319 OR5B17Q8NGF7 314 aa10.19□□□□□ -0.78
HCG18-242ENST00000602319 MCRS1Q96EZ8 462 aa10.19□□□□□ -0.78
HCG18-242ENST00000602319 HAUS8Q9BT25 410 aa10.19□□□□□ -0.78
HCG18-242ENST00000602319 CDH19Q9H159 772 aa10.19□□□□□ -0.78
HCG18-242ENST00000602319 TUBA8Q9NY65 449 aaPredicted RBP10.19□□□□□ -0.78
HCG18-242ENST00000602319 DCDC2Q9UHG0 476 aa10.19□□□□□ -0.78
HCG18-242ENST00000602319 HERC5Q9UII4 1024 aaKnown RBP10.19□□□□□ -0.78
HCG18-242ENST00000602319 TMEM114B3SHH9 223 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 MAGEB3O15480 346 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 ADCY3O60266 1144 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 DGAT1O75907 488 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 ADSLP30566 484 aaPredicted RBP10.18□□□□□ -0.78
HCG18-242ENST00000602319 HK2P52789 917 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 TGFB2P61812 414 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 GSTM4Q03013 218 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 PPIDQ08752 370 aaKnown RBP10.18□□□□□ -0.78
HCG18-242ENST00000602319 MTM1Q13496 603 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 PGM5Q15124 567 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 KCNT1Q5JUK3 1230 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 ZFYVE27Q5T4F4 411 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 CYP4A22Q5TCH4 519 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 SLC9A4Q6AI14 798 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 TRMT10BQ6PF06 316 aaKnown RBP10.18□□□□□ -0.78
HCG18-242ENST00000602319 NPNTQ6UXI9 565 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 ACER1Q8TDN7 264 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 MTMR10Q9NXD2 777 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 RBAKQ9NYW8 714 aaPredicted RBP10.18□□□□□ -0.78
HCG18-242ENST00000602319 ZNF232Q9UNY5 417 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 H3BNH8 94 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 RIMBP2O15034 1052 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 THRAP10827 490 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 KRT3P12035 628 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 MIPP30301 263 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 CD151P48509 253 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 RPL10AP62906 217 aaKnown RBP10.18□□□□□ -0.78
HCG18-242ENST00000602319 TAF5Q15542 800 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 N4BP2L1Q5TBK1 243 aaPredicted RBP10.18□□□□□ -0.78
HCG18-242ENST00000602319 DENND1BQ6P3S1 775 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 MAMDC4Q6UXC1 1216 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 HM13Q8TCT9 377 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 SGF29Q96ES7 293 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 PRPF18Q99633 342 aaKnown RBP10.18□□□□□ -0.78
HCG18-242ENST00000602319 DOK1Q99704 481 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 GCOM2Q9BZD3 368 aaPredicted RBP10.18□□□□□ -0.78
HCG18-242ENST00000602319 OSBPL6Q9BZF3 934 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 IGSF9Q9P2J2 1179 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 ZSWIM8A7E2V4 1837 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 DKC1O60832 514 aaKnown RBP eCLIP10.18□□□□□ -0.78
HCG18-242ENST00000602319 CBFA2T3O75081 653 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 TOM1L1O75674 476 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 ASPAP45381 313 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 YWHAEP62258 255 aaKnown RBP10.18□□□□□ -0.78
HCG18-242ENST00000602319 DACT2Q5SW24 774 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 SYCP2LQ5T4T6 812 aa10.18□□□□□ -0.78
HCG18-242ENST00000602319 SLFN12LQ6IEE8 588 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms