RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 ACSL4O60488 711 aa20.43■□□□□ 0.86
SHKBP1-214ENST00000597396 GJB6O95452 261 aa20.43■□□□□ 0.86
SHKBP1-214ENST00000597396 FTLP02792 175 aaPredicted RBP20.43■□□□□ 0.86
SHKBP1-214ENST00000597396 CYBBP04839 570 aa20.43■□□□□ 0.86
SHKBP1-214ENST00000597396 SLC2A3P11169 496 aa20.43■□□□□ 0.86
SHKBP1-214ENST00000597396 GALK1P51570 392 aa20.43■□□□□ 0.86
SHKBP1-214ENST00000597396 GRSF1Q12849 480 aaKnown RBP eCLIP20.43■□□□□ 0.86
SHKBP1-214ENST00000597396 TBX2Q13207 712 aaPredicted RBP20.43■□□□□ 0.86
SHKBP1-214ENST00000597396 LRRC32Q14392 662 aa20.43■□□□□ 0.86
SHKBP1-214ENST00000597396 GAB4Q2WGN9 574 aa20.43■□□□□ 0.86
SHKBP1-214ENST00000597396 SLC25A52Q3SY17 297 aa20.43■□□□□ 0.86
SHKBP1-214ENST00000597396 ADGRF1Q5T601 910 aa20.43■□□□□ 0.86
SHKBP1-214ENST00000597396 SND1Q7KZF4 910 aaKnown RBP eCLIP20.43■□□□□ 0.86
SHKBP1-214ENST00000597396 TMEM105Q8N8V8 129 aa20.43■□□□□ 0.86
SHKBP1-214ENST00000597396 ATP6V0D2Q8N8Y2 350 aa20.43■□□□□ 0.86
SHKBP1-214ENST00000597396 BHMTQ93088 406 aa20.43■□□□□ 0.86
SHKBP1-214ENST00000597396 AZIN2Q96A70 460 aa20.43■□□□□ 0.86
SHKBP1-214ENST00000597396 XPO6Q96QU8 1125 aaKnown RBP20.43■□□□□ 0.86
SHKBP1-214ENST00000597396 TBCBQ99426 244 aa20.43■□□□□ 0.86
SHKBP1-214ENST00000597396 DDX50Q9BQ39 737 aaKnown RBP20.43■□□□□ 0.86
SHKBP1-214ENST00000597396 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.43■□□□□ 0.86
SHKBP1-214ENST00000597396 MARK1Q9P0L2 795 aa20.43■□□□□ 0.86
SHKBP1-214ENST00000597396 SLC12A6Q9UHW9 1150 aa20.43■□□□□ 0.86
SHKBP1-214ENST00000597396 ANKRD62A6NC57 917 aa20.42■□□□□ 0.86
SHKBP1-214ENST00000597396 TYRP14679 529 aa20.42■□□□□ 0.86
SHKBP1-214ENST00000597396 RRM1P23921 792 aa20.42■□□□□ 0.86
SHKBP1-214ENST00000597396 CCR1P32246 355 aa20.42■□□□□ 0.86
SHKBP1-214ENST00000597396 EIF4A3P38919 411 aaKnown RBP20.42■□□□□ 0.86
SHKBP1-214ENST00000597396 OPRD1P41143 372 aa20.42■□□□□ 0.86
SHKBP1-214ENST00000597396 DEUP1Q05D60 604 aa20.42■□□□□ 0.86
SHKBP1-214ENST00000597396 ARID5BQ14865 1188 aa20.42■□□□□ 0.86
SHKBP1-214ENST00000597396 TMEM196Q5HYL7 178 aa20.42■□□□□ 0.86
SHKBP1-214ENST00000597396 NAIF1Q69YI7 327 aaPredicted RBP20.42■□□□□ 0.86
SHKBP1-214ENST00000597396 FAM217AQ8IXS0 508 aa20.42■□□□□ 0.86
SHKBP1-214ENST00000597396 NAT16Q8N8M0 369 aa20.42■□□□□ 0.86
SHKBP1-214ENST00000597396 JOSD2Q8TAC2 188 aa20.42■□□□□ 0.86
SHKBP1-214ENST00000597396 RXFP2Q8WXD0 754 aa20.42■□□□□ 0.86
SHKBP1-214ENST00000597396 TRIM11Q96F44 468 aa20.42■□□□□ 0.86
SHKBP1-214ENST00000597396 CFAP57Q96MR6 1250 aa20.42■□□□□ 0.86
SHKBP1-214ENST00000597396 DEF6Q9H4E7 631 aa20.42■□□□□ 0.86
SHKBP1-214ENST00000597396 LMAN1LQ9HAT1 526 aa20.42■□□□□ 0.86
SHKBP1-214ENST00000597396 MYO18AQ92614 2054 aaKnown RBP20.41■□□□□ 0.86
SHKBP1-214ENST00000597396 SIGLEC16A6NMB1 481 aa20.41■□□□□ 0.86
SHKBP1-214ENST00000597396 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.41■□□□□ 0.86
SHKBP1-214ENST00000597396 TSPAN3O60637 253 aa20.41■□□□□ 0.86
SHKBP1-214ENST00000597396 F9P00740 461 aa20.41■□□□□ 0.86
SHKBP1-214ENST00000597396 PDGFRAP16234 1089 aa20.41■□□□□ 0.86
SHKBP1-214ENST00000597396 TFE3P19532 575 aaPredicted RBP20.41■□□□□ 0.86
SHKBP1-214ENST00000597396 ABCB4P21439 1286 aa20.41■□□□□ 0.86
SHKBP1-214ENST00000597396 DRD1P21728 446 aa20.41■□□□□ 0.86
SHKBP1-214ENST00000597396 SDC4P31431 198 aa20.41■□□□□ 0.86
SHKBP1-214ENST00000597396 EIF2DP41214 584 aaKnown RBP20.41■□□□□ 0.86
SHKBP1-214ENST00000597396 EIF4EBP2Q13542 120 aaPredicted RBP20.41■□□□□ 0.86
SHKBP1-214ENST00000597396 DGKKQ5KSL6 1271 aa20.41■□□□□ 0.86
SHKBP1-214ENST00000597396 OTUD1Q5VV17 481 aaPredicted RBP20.41■□□□□ 0.86
SHKBP1-214ENST00000597396 FSTL4Q6MZW2 842 aa20.41■□□□□ 0.86
SHKBP1-214ENST00000597396 TRNP1Q6NT89 227 aa20.41■□□□□ 0.86
SHKBP1-214ENST00000597396 DCUN1D2Q6PH85 259 aa20.41■□□□□ 0.86
SHKBP1-214ENST00000597396 WDR59Q6PJI9 974 aa20.41■□□□□ 0.86
SHKBP1-214ENST00000597396 C12orf40Q86WS4 652 aa20.41■□□□□ 0.86
SHKBP1-214ENST00000597396 DNAAF5Q86Y56 855 aa20.41■□□□□ 0.86
SHKBP1-214ENST00000597396 DDI1Q8WTU0 396 aa20.41■□□□□ 0.86
SHKBP1-214ENST00000597396 NT5C3BQ969T7 300 aa20.41■□□□□ 0.86
SHKBP1-214ENST00000597396 ZNF653Q96CK0 615 aa20.41■□□□□ 0.86
SHKBP1-214ENST00000597396 BTN2A3PQ96KV6 586 aa20.41■□□□□ 0.86
SHKBP1-214ENST00000597396 PNKPQ96T60 521 aa20.41■□□□□ 0.86
SHKBP1-214ENST00000597396 PLK2Q9NYY3 685 aa20.41■□□□□ 0.86
SHKBP1-214ENST00000597396 STOML2Q9UJZ1 356 aa20.41■□□□□ 0.86
SHKBP1-214ENST00000597396 PAXBP1Q9Y5B6 917 aa20.41■□□□□ 0.86
SHKBP1-214ENST00000597396 A0A087X0T9 212 aa20.4■□□□□ 0.86
SHKBP1-214ENST00000597396 C2CD4BA6NLJ0 364 aa20.4■□□□□ 0.86
SHKBP1-214ENST00000597396 ATMINO43313 823 aaPredicted RBP20.4■□□□□ 0.86
SHKBP1-214ENST00000597396 APODP05090 189 aa20.4■□□□□ 0.86
SHKBP1-214ENST00000597396 FAM228BP0C875 321 aa20.4■□□□□ 0.86
SHKBP1-214ENST00000597396 CHRNB1P11230 501 aa20.4■□□□□ 0.86
SHKBP1-214ENST00000597396 GPD1P21695 349 aa20.4■□□□□ 0.86
SHKBP1-214ENST00000597396 MAGEA9P43362 315 aa20.4■□□□□ 0.86
SHKBP1-214ENST00000597396 SLC6A11P48066 632 aa20.4■□□□□ 0.86
SHKBP1-214ENST00000597396 ATP11AP98196 1134 aa20.4■□□□□ 0.86
SHKBP1-214ENST00000597396 KDSRQ06136 332 aa20.4■□□□□ 0.86
SHKBP1-214ENST00000597396 PPP2R5DQ14738 602 aa20.4■□□□□ 0.86
SHKBP1-214ENST00000597396 CDO1Q16878 200 aa20.4■□□□□ 0.86
SHKBP1-214ENST00000597396 MPPE1Q53F39 396 aa20.4■□□□□ 0.86
SHKBP1-214ENST00000597396 CCDC122Q5T0U0 273 aa20.4■□□□□ 0.86
SHKBP1-214ENST00000597396 CHSY1Q86X52 802 aa20.4■□□□□ 0.86
SHKBP1-214ENST00000597396 ZNF687Q8N1G0 1237 aa20.4■□□□□ 0.86
SHKBP1-214ENST00000597396 PGAP3Q96FM1 320 aaPredicted RBP20.4■□□□□ 0.86
SHKBP1-214ENST00000597396 MCEEQ96PE7 176 aa20.4■□□□□ 0.86
SHKBP1-214ENST00000597396 ISCUQ9H1K1 167 aa20.4■□□□□ 0.86
SHKBP1-214ENST00000597396 FBRSL1Q9HCM7 1045 aaKnown RBP20.4■□□□□ 0.86
SHKBP1-214ENST00000597396 ARHGEF4Q9NR80 690 aa20.4■□□□□ 0.86
SHKBP1-214ENST00000597396 RBM12Q9NTZ6 932 aaKnown RBP20.4■□□□□ 0.86
SHKBP1-214ENST00000597396 PIGVQ9NUD9 493 aa20.4■□□□□ 0.86
SHKBP1-214ENST00000597396 PARVAQ9NVD7 372 aa20.4■□□□□ 0.86
SHKBP1-214ENST00000597396 FAM86C1Q9NVL1 165 aa20.4■□□□□ 0.86
SHKBP1-214ENST00000597396 DNAJC17Q9NVM6 304 aaKnown RBP20.4■□□□□ 0.86
SHKBP1-214ENST00000597396 TMEM51Q9NW97 253 aa20.4■□□□□ 0.86
SHKBP1-214ENST00000597396 DEC1Q9P2X7 70 aa20.4■□□□□ 0.86
SHKBP1-214ENST00000597396 CNOT8Q9UFF9 292 aaKnown RBP20.4■□□□□ 0.86
SHKBP1-214ENST00000597396 GOLGA6L7A0A1B0GV03 622 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms