RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 ABCB4P21439 1286 aa17.96■□□□□ 0.47
SHKBP1-212ENST00000596163 CCR1P32246 355 aa17.96■□□□□ 0.47
SHKBP1-212ENST00000596163 PBX1P40424 430 aa17.96■□□□□ 0.47
SHKBP1-212ENST00000596163 DGKGP49619 791 aa17.96■□□□□ 0.47
SHKBP1-212ENST00000596163 NHLH1Q02575 133 aa17.96■□□□□ 0.47
SHKBP1-212ENST00000596163 CENPCQ03188 943 aa17.96■□□□□ 0.47
SHKBP1-212ENST00000596163 KDSRQ06136 332 aa17.96■□□□□ 0.47
SHKBP1-212ENST00000596163 GAS6Q14393 721 aa17.96■□□□□ 0.47
SHKBP1-212ENST00000596163 E2F5Q15329 346 aa17.96■□□□□ 0.47
SHKBP1-212ENST00000596163 HSF5Q4G112 596 aaPredicted RBP17.96■□□□□ 0.47
SHKBP1-212ENST00000596163 FYB2Q5VWT5 728 aa17.96■□□□□ 0.47
SHKBP1-212ENST00000596163 ZC3H14Q6PJT7 736 aaKnown RBP17.96■□□□□ 0.47
SHKBP1-212ENST00000596163 MMS22LQ6ZRQ5 1243 aa17.96■□□□□ 0.47
SHKBP1-212ENST00000596163 SND1Q7KZF4 910 aaKnown RBP eCLIP17.96■□□□□ 0.47
SHKBP1-212ENST00000596163 PHF13Q86YI8 300 aaPredicted RBP17.96■□□□□ 0.47
SHKBP1-212ENST00000596163 ZNF557Q8N988 423 aaPredicted RBP17.96■□□□□ 0.47
SHKBP1-212ENST00000596163 RNF214Q8ND24 703 aa17.96■□□□□ 0.47
SHKBP1-212ENST00000596163 FAM122AQ96E09 287 aa17.96■□□□□ 0.47
SHKBP1-212ENST00000596163 PCDHB18PQ96TA0 734 aa17.96■□□□□ 0.47
SHKBP1-212ENST00000596163 TTYH3Q9C0H2 523 aa17.96■□□□□ 0.47
SHKBP1-212ENST00000596163 ADAM22Q9P0K1 906 aa17.96■□□□□ 0.47
SHKBP1-212ENST00000596163 SLC8A2Q9UPR5 921 aa17.96■□□□□ 0.47
SHKBP1-212ENST00000596163 PRKCIP41743 596 aa17.95■□□□□ 0.46
SHKBP1-212ENST00000596163 KLHL30Q0D2K2 578 aa17.95■□□□□ 0.46
SHKBP1-212ENST00000596163 ZC3H12AQ5D1E8 599 aaKnown RBP17.95■□□□□ 0.46
SHKBP1-212ENST00000596163 MPP7Q5T2T1 576 aa17.95■□□□□ 0.46
SHKBP1-212ENST00000596163 TRMT11Q7Z4G4 463 aaKnown RBP17.95■□□□□ 0.46
SHKBP1-212ENST00000596163 CCDC117Q8IWD4 279 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-212ENST00000596163 MAML2Q8IZL2 1156 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-212ENST00000596163 TERB1Q8NA31 727 aa17.95■□□□□ 0.46
SHKBP1-212ENST00000596163 RPLP0P6Q8NHW5 317 aa17.95■□□□□ 0.46
SHKBP1-212ENST00000596163 SLC30A5Q8TAD4 765 aa17.95■□□□□ 0.46
SHKBP1-212ENST00000596163 SYN2Q92777 582 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-212ENST00000596163 BHMTQ93088 406 aa17.95■□□□□ 0.46
SHKBP1-212ENST00000596163 BTN2A3PQ96KV6 586 aa17.95■□□□□ 0.46
SHKBP1-212ENST00000596163 C11orf70Q9BRQ4 267 aa17.95■□□□□ 0.46
SHKBP1-212ENST00000596163 XPO4Q9C0E2 1151 aaKnown RBP17.95■□□□□ 0.46
SHKBP1-212ENST00000596163 PLK2Q9NYY3 685 aa17.95■□□□□ 0.46
SHKBP1-212ENST00000596163 FBXO10Q9UK96 956 aa17.95■□□□□ 0.46
SHKBP1-212ENST00000596163 CAPN11Q9UMQ6 739 aa17.95■□□□□ 0.46
SHKBP1-212ENST00000596163 LUC7L2Q9Y383 392 aaKnown RBP17.95■□□□□ 0.46
SHKBP1-212ENST00000596163 BZW2Q9Y6E2 419 aaKnown RBP17.95■□□□□ 0.46
SHKBP1-212ENST00000596163 MIA3Q5JRA6 1907 aa17.94■□□□□ 0.46
SHKBP1-212ENST00000596163 M0QYT0 321 aa17.94■□□□□ 0.46
SHKBP1-212ENST00000596163 TSPAN3O60637 253 aa17.94■□□□□ 0.46
SHKBP1-212ENST00000596163 MOCS2O96007 188 aaPredicted RBP17.94■□□□□ 0.46
SHKBP1-212ENST00000596163 SEC13P55735 322 aa17.94■□□□□ 0.46
SHKBP1-212ENST00000596163 ZBED6P86452 979 aa17.94■□□□□ 0.46
SHKBP1-212ENST00000596163 SATB1Q01826 763 aa17.94■□□□□ 0.46
SHKBP1-212ENST00000596163 C1QBPQ07021 282 aaKnown RBP17.94■□□□□ 0.46
SHKBP1-212ENST00000596163 NME3Q13232 169 aa17.94■□□□□ 0.46
SHKBP1-212ENST00000596163 EIF4EBP2Q13542 120 aaPredicted RBP17.94■□□□□ 0.46
SHKBP1-212ENST00000596163 SLC25A52Q3SY17 297 aa17.94■□□□□ 0.46
SHKBP1-212ENST00000596163 C10orf76Q5T2E6 689 aa17.94■□□□□ 0.46
SHKBP1-212ENST00000596163 ACAD10Q6JQN1 1059 aa17.94■□□□□ 0.46
SHKBP1-212ENST00000596163 PHTF2Q8N3S3 785 aa17.94■□□□□ 0.46
SHKBP1-212ENST00000596163 USP33Q8TEY7 942 aa17.94■□□□□ 0.46
SHKBP1-212ENST00000596163 EZH1Q92800 747 aaPredicted RBP17.94■□□□□ 0.46
SHKBP1-212ENST00000596163 SLC27A6Q9Y2P4 619 aa17.94■□□□□ 0.46
SHKBP1-212ENST00000596163 ITIH6Q6UXX5 1313 aa17.94■□□□□ 0.46
SHKBP1-212ENST00000596163 SYNJ2BP-COX16A0A087WUM0 186 aa17.93■□□□□ 0.46
SHKBP1-212ENST00000596163 KCNU1A8MYU2 1149 aa17.93■□□□□ 0.46
SHKBP1-212ENST00000596163 CISD3P0C7P0 127 aa17.93■□□□□ 0.46
SHKBP1-212ENST00000596163 HOXA6P31267 233 aa17.93■□□□□ 0.46
SHKBP1-212ENST00000596163 SULT1E1P49888 294 aa17.93■□□□□ 0.46
SHKBP1-212ENST00000596163 GSCP56915 257 aaPredicted RBP17.93■□□□□ 0.46
SHKBP1-212ENST00000596163 TRIM14Q14142 442 aa17.93■□□□□ 0.46
SHKBP1-212ENST00000596163 C2CD6Q53TS8 623 aa17.93■□□□□ 0.46
SHKBP1-212ENST00000596163 C2orf27AQ580R0 203 aa17.93■□□□□ 0.46
SHKBP1-212ENST00000596163 ACBD5Q5T8D3 534 aaPredicted RBP17.93■□□□□ 0.46
SHKBP1-212ENST00000596163 PIK3R6Q5UE93 754 aa17.93■□□□□ 0.46
SHKBP1-212ENST00000596163 SYT13Q7L8C5 426 aa17.93■□□□□ 0.46
SHKBP1-212ENST00000596163 VPS36Q86VN1 386 aa17.93■□□□□ 0.46
SHKBP1-212ENST00000596163 CAMKK1Q8N5S9 505 aa17.93■□□□□ 0.46
SHKBP1-212ENST00000596163 HJURPQ8NCD3 748 aaPredicted RBP17.93■□□□□ 0.46
SHKBP1-212ENST00000596163 ATRIPQ8WXE1 791 aa17.93■□□□□ 0.46
SHKBP1-212ENST00000596163 PGAP3Q96FM1 320 aaPredicted RBP17.93■□□□□ 0.46
SHKBP1-212ENST00000596163 VCPIP1Q96JH7 1222 aa17.93■□□□□ 0.46
SHKBP1-212ENST00000596163 NPY6RQ99463 290 aa17.93■□□□□ 0.46
SHKBP1-212ENST00000596163 SELENOOQ9BVL4 669 aa17.93■□□□□ 0.46
SHKBP1-212ENST00000596163 SEMA4AQ9H3S1 761 aa17.93■□□□□ 0.46
SHKBP1-212ENST00000596163 HAUS4Q9H6D7 363 aa17.93■□□□□ 0.46
SHKBP1-212ENST00000596163 ZSCAN32Q9NX65 697 aa17.93■□□□□ 0.46
SHKBP1-212ENST00000596163 COX16Q9P0S2 106 aa17.93■□□□□ 0.46
SHKBP1-212ENST00000596163 TMEM59LQ9UK28 342 aa17.93■□□□□ 0.46
SHKBP1-212ENST00000596163 STARD13Q9Y3M8 1113 aa17.93■□□□□ 0.46
SHKBP1-212ENST00000596163 PCDHGA2Q9Y5H1 932 aa17.93■□□□□ 0.46
SHKBP1-212ENST00000596163 GOLGA6L7A0A1B0GV03 622 aa17.92■□□□□ 0.46
SHKBP1-212ENST00000596163 ANKRD62A6NC57 917 aa17.92■□□□□ 0.46
SHKBP1-212ENST00000596163 GFRA2O00451 464 aa17.92■□□□□ 0.46
SHKBP1-212ENST00000596163 TPM1P09493 284 aa17.92■□□□□ 0.46
SHKBP1-212ENST00000596163 KRT3P12035 628 aa17.92■□□□□ 0.46
SHKBP1-212ENST00000596163 NBL1P41271 181 aa17.92■□□□□ 0.46
SHKBP1-212ENST00000596163 PITX1P78337 314 aaPredicted RBP17.92■□□□□ 0.46
SHKBP1-212ENST00000596163 DEUP1Q05D60 604 aa17.92■□□□□ 0.46
SHKBP1-212ENST00000596163 FAM133BQ5BKY9 247 aaKnown RBP17.92■□□□□ 0.46
SHKBP1-212ENST00000596163 EOGTQ5NDL2 527 aa17.92■□□□□ 0.46
SHKBP1-212ENST00000596163 BRMS1LQ5PSV4 323 aa17.92■□□□□ 0.46
SHKBP1-212ENST00000596163 SPECC1LQ69YQ0 1117 aa17.92■□□□□ 0.46
SHKBP1-212ENST00000596163 SDE2Q6IQ49 451 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms