RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 PTCH2Q9Y6C5 1203 aa19.78■□□□□ 0.76
PRKCSH-209ENST00000589838 WDR91A4D1P6 747 aa19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 C2CD2LO14523 706 aa19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 TNPO2O14787 897 aaKnown RBP19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 CAPN9O14815 690 aa19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 UNC5CO95185 931 aa19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 SLC8A1P32418 973 aa19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 RPL9P32969 192 aaKnown RBP19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 ETV4P43268 484 aa19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 MAP3K7CLP57077 242 aa19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 PAFAH1B3Q15102 231 aaKnown RBP19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 PRKD1Q15139 912 aaPredicted RBP19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 DSTYKQ6XUX3 929 aa19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 RASAL3Q86YV0 1011 aa19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 COLGALT1Q8NBJ5 622 aa19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 LRRN4Q8WUT4 740 aa19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 NDRG1Q92597 394 aaKnown RBP19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 NTAN1Q96AB6 310 aa19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 MYLK2Q9H1R3 596 aa19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 CNGB3Q9NQW8 809 aa19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 KRT82Q9NSB4 513 aa19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 MKS1Q9NXB0 559 aa19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 CDH9Q9ULB4 789 aa19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 GIT1Q9Y2X7 761 aa19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 C9IYK1 514 aa19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 EEF2KO00418 725 aaKnown RBP19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 BEST1O76090 585 aa19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 C6orf222P0C671 652 aaPredicted RBP19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 GJA9P57773 515 aa19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 NBPF20Q3BBV1 942 aa19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 OTUD1Q5VV17 481 aaPredicted RBP19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 CST9Q5W186 159 aa19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 LRRC8BQ6P9F7 803 aa19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 DENND5BQ6ZUT9 1274 aa19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 ASRGL1Q7L266 308 aa19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 STAMBPL1Q96FJ0 436 aa19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 RAB3IPQ96QF0 476 aaPredicted RBP19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 NAT9Q9BTE0 207 aa19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 TSSK1BQ9BXA7 367 aa19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 TRIM55Q9BYV6 548 aa19.77■□□□□ 0.76
PRKCSH-209ENST00000589838 SDR42E2A6NKP2 422 aa19.76■□□□□ 0.75
PRKCSH-209ENST00000589838 CXorf49A8MYA2 514 aaPredicted RBP19.76■□□□□ 0.75
PRKCSH-209ENST00000589838 MFSD11O43934 449 aa19.76■□□□□ 0.75
PRKCSH-209ENST00000589838 AP1G2O75843 785 aa19.76■□□□□ 0.75
PRKCSH-209ENST00000589838 TGDSO95455 350 aa19.76■□□□□ 0.75
PRKCSH-209ENST00000589838 IL1BP01584 269 aa19.76■□□□□ 0.75
PRKCSH-209ENST00000589838 VAV1P15498 845 aa19.76■□□□□ 0.75
PRKCSH-209ENST00000589838 NDUFV1P49821 464 aa19.76■□□□□ 0.75
PRKCSH-209ENST00000589838 ZNF135P52742 658 aaPredicted RBP19.76■□□□□ 0.75
PRKCSH-209ENST00000589838 INHBEP58166 350 aa19.76■□□□□ 0.75
PRKCSH-209ENST00000589838 AP1B1Q10567 949 aa19.76■□□□□ 0.75
PRKCSH-209ENST00000589838 PARP6Q2NL67 630 aa19.76■□□□□ 0.75
PRKCSH-209ENST00000589838 GNASQ5JWF2 1037 aa19.76■□□□□ 0.75
PRKCSH-209ENST00000589838 SWT1Q5T5J6 900 aaKnown RBP19.76■□□□□ 0.75
PRKCSH-209ENST00000589838 ERP27Q96DN0 273 aa19.76■□□□□ 0.75
PRKCSH-209ENST00000589838 THOC1Q96FV9 657 aaKnown RBP19.76■□□□□ 0.75
PRKCSH-209ENST00000589838 FAM111AQ96PZ2 611 aa19.76■□□□□ 0.75
PRKCSH-209ENST00000589838 ZFYVE28Q9HCC9 887 aa19.76■□□□□ 0.75
PRKCSH-209ENST00000589838 CRTAC1Q9NQ79 661 aa19.76■□□□□ 0.75
PRKCSH-209ENST00000589838 CHKBQ9Y259 395 aa19.76■□□□□ 0.75
PRKCSH-209ENST00000589838 TRPM7Q96QT4 1865 aa19.76■□□□□ 0.75
PRKCSH-209ENST00000589838 SYNJ2BP-COX16A0A087WUM0 186 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 RNF103O00237 685 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 KLF11O14901 512 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 GPR182O15218 404 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 CREB3O43889 395 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 ATP6V1G2O95670 118 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 PCSK1P29120 753 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 ADRA1BP35368 520 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 MLH1P40692 756 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 CCNFP41002 786 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 HCAR3P49019 387 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 RASSF2P50749 326 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 DAOAP59103 153 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 NME3Q13232 169 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 SYPL2Q5VXT5 272 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 STEAP4Q687X5 459 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 FAM35AQ86V20 835 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 DEPDC1BQ8WUY9 529 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 P2RY11Q96G91 374 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 SRPK1Q96SB4 655 aaKnown RBP19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 GAD1Q99259 594 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 LGMNQ99538 433 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 ULBP1Q9BZM6 244 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 PLAC1Q9HBJ0 212 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 SPC25Q9HBM1 224 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 COX16Q9P0S2 106 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 TSC2P49815 1807 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 NCAM2O15394 837 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 F9P00740 461 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 KCNJ2P63252 427 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 SCAPQ12770 1279 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 NAB1Q13506 487 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 DPYSQ14117 519 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 ARL13BQ3SXY8 428 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 RFX8Q6ZV50 586 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 CCNYQ8ND76 341 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 SLC7A14Q8TBB6 771 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 CDKL2Q92772 493 aa19.75■□□□□ 0.75
PRKCSH-209ENST00000589838 TTC17Q96AE7 1141 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms