RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 RIMS2Q9UQ26 1411 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 GRID2IPA4D2P6 1211 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 C9orf118A6NHY6 69 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 CCDC169A6NNP5 214 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 B8ZZF3 427 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 H0YGN5 161 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 MAGEB3O15480 346 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 XPOTO43592 962 aaKnown RBP6.35□□□□□ -1.39
SMAD4-203ENST00000585448 NMT2O60551 498 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 TMCC2O75069 709 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 F2P00734 622 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 S100BP04271 92 aaPredicted RBP6.35□□□□□ -1.39
SMAD4-203ENST00000585448 OCM2P0CE71 109 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 OCMP0CE72 109 aaPredicted RBP6.35□□□□□ -1.39
SMAD4-203ENST00000585448 CALM1P0DP23 149 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 CALM2P0DP24 149 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 CALM3P0DP25 149 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 COL6A1P12109 1028 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 VCLP18206 1134 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 POLR2CP19387 275 aaPredicted RBP6.35□□□□□ -1.39
SMAD4-203ENST00000585448 CFL1P23528 166 aaKnown RBP6.35□□□□□ -1.39
SMAD4-203ENST00000585448 CMA1P23946 247 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 KRT2P35908 639 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 PBX1P40424 430 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 TMPOP42166 694 aaKnown RBP6.35□□□□□ -1.39
SMAD4-203ENST00000585448 PRCPP42785 496 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 CCR3P51677 355 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 AP2B1P63010 937 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 COG7P83436 770 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 MRPL28Q13084 256 aaKnown RBP6.35□□□□□ -1.39
SMAD4-203ENST00000585448 HNRNPDQ14103 355 aaKnown RBP6.35□□□□□ -1.39
SMAD4-203ENST00000585448 RTP5Q14D33 572 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 PSMD6Q15008 389 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 TGFBIQ15582 683 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 EZH2Q15910 746 aaKnown RBP6.35□□□□□ -1.39
SMAD4-203ENST00000585448 EFCAB2Q5VUJ9 269 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 FAM122CQ6P4D5 195 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 RFPL4BQ6ZWI9 263 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 FASTKD5Q7L8L6 764 aaKnown RBP6.35□□□□□ -1.39
SMAD4-203ENST00000585448 HEATR4Q86WZ0 1026 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 SNX32Q86XE0 403 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 ERI1Q8IV48 349 aaKnown RBP6.35□□□□□ -1.39
SMAD4-203ENST00000585448 LRRC34Q8IZ02 419 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 TSPYL6Q8N831 410 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 ATP6V0D2Q8N8Y2 350 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 BRSK1Q8TDC3 778 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 HCAR2Q8TDS4 363 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 AFG1LQ8WV93 481 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 BORCS5Q969J3 196 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 RILPL2Q969X0 211 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 NMD3Q96D46 503 aaKnown RBP6.35□□□□□ -1.39
SMAD4-203ENST00000585448 HSPBAP1Q96EW2 488 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 CAPZA3Q96KX2 299 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 C1orf74Q96LT6 269 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 CFAP57Q96MR6 1250 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 SAMD11Q96NU1 681 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 SYT3Q9BQG1 590 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 NEURL2Q9BR09 285 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 UBAC1Q9BSL1 405 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 TARS2Q9BW92 718 aaKnown RBP6.35□□□□□ -1.39
SMAD4-203ENST00000585448 MTFR1LQ9H019 292 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 GLT8D2Q9H1C3 349 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 SNX25Q9H3E2 840 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 EHD1Q9H4M9 534 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 TLE6Q9H808 572 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 DNAJC18Q9H819 358 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 CD209Q9NNX6 404 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 NLRC4Q9NPP4 1024 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 C12orf4Q9NQ89 552 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 C8orf4Q9NR00 106 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 ZDHHC7Q9NXF8 308 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 KLHL42Q9P2K6 505 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 HMGXB4Q9UGU5 601 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 GUCA1BQ9UMX6 200 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 TDRKHQ9Y2W6 561 aaKnown RBP6.35□□□□□ -1.39
SMAD4-203ENST00000585448 PRKAB1Q9Y478 270 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 HYOU1Q9Y4L1 999 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 NFS1Q9Y697 457 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 SETD1AO15047 1707 aaKnown RBP6.35□□□□□ -1.39
SMAD4-203ENST00000585448 KDM5AP29375 1690 aaKnown RBP6.35□□□□□ -1.39
SMAD4-203ENST00000585448 NESP48681 1621 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 MAST1Q9Y2H9 1570 aa6.35□□□□□ -1.39
SMAD4-203ENST00000585448 TUBGCP6Q96RT7 1819 aa6.34□□□□□ -1.39
SMAD4-203ENST00000585448 CEP152O94986 1710 aa6.34□□□□□ -1.39
SMAD4-203ENST00000585448 MAP3K15Q6ZN16 1313 aa6.34□□□□□ -1.39
SMAD4-203ENST00000585448 ZC3H13Q5T200 1668 aaKnown RBP6.34□□□□□ -1.39
SMAD4-203ENST00000585448 FAM237AA0A1B0GTK4 181 aa6.34□□□□□ -1.39
SMAD4-203ENST00000585448 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.34□□□□□ -1.39
SMAD4-203ENST00000585448 CLRN2A0PK11 232 aa6.34□□□□□ -1.39
SMAD4-203ENST00000585448 A8MXQ7 604 aa6.34□□□□□ -1.39
SMAD4-203ENST00000585448 DKC1O60832 514 aaKnown RBP eCLIP6.34□□□□□ -1.39
SMAD4-203ENST00000585448 TRIM13O60858 407 aa6.34□□□□□ -1.39
SMAD4-203ENST00000585448 OPHN1O60890 802 aa6.34□□□□□ -1.39
SMAD4-203ENST00000585448 GMNNO75496 209 aa6.34□□□□□ -1.39
SMAD4-203ENST00000585448 TRMUO75648 421 aaKnown RBP6.34□□□□□ -1.39
SMAD4-203ENST00000585448 UFL1O94874 794 aa6.34□□□□□ -1.39
SMAD4-203ENST00000585448 NDUFA10O95299 355 aa6.34□□□□□ -1.39
SMAD4-203ENST00000585448 AFPP02771 609 aaKnown RBP6.34□□□□□ -1.39
SMAD4-203ENST00000585448 FYNP06241 537 aa6.34□□□□□ -1.39
SMAD4-203ENST00000585448 UBTFL6P0CB48 400 aaPredicted RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms