RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 CALCOCO1Q9P1Z2 691 aa16.13■□□□□ 0.17
RABGGTA-219ENST00000560871 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.13■□□□□ 0.17
RABGGTA-219ENST00000560871 GOLGA8SH3BPF8 625 aa16.12■□□□□ 0.17
RABGGTA-219ENST00000560871 DDX3XO00571 662 aaKnown RBP eCLIP16.12■□□□□ 0.17
RABGGTA-219ENST00000560871 SKILP12757 684 aa16.12■□□□□ 0.17
RABGGTA-219ENST00000560871 CHKAP35790 457 aa16.12■□□□□ 0.17
RABGGTA-219ENST00000560871 FLT3P36888 993 aa16.12■□□□□ 0.17
RABGGTA-219ENST00000560871 MATKP42679 507 aa16.12■□□□□ 0.17
RABGGTA-219ENST00000560871 CXCL12P48061 93 aa16.12■□□□□ 0.17
RABGGTA-219ENST00000560871 GALK1P51570 392 aa16.12■□□□□ 0.17
RABGGTA-219ENST00000560871 C1QBPQ07021 282 aaKnown RBP16.12■□□□□ 0.17
RABGGTA-219ENST00000560871 KLHL30Q0D2K2 578 aa16.12■□□□□ 0.17
RABGGTA-219ENST00000560871 MESP2Q0VG99 397 aa16.12■□□□□ 0.17
RABGGTA-219ENST00000560871 TRIM14Q14142 442 aa16.12■□□□□ 0.17
RABGGTA-219ENST00000560871 FYB2Q5VWT5 728 aa16.12■□□□□ 0.17
RABGGTA-219ENST00000560871 ARCQ7LC44 396 aa16.12■□□□□ 0.17
RABGGTA-219ENST00000560871 BNIPLQ7Z465 357 aa16.12■□□□□ 0.17
RABGGTA-219ENST00000560871 UNC45BQ8IWX7 931 aa16.12■□□□□ 0.17
RABGGTA-219ENST00000560871 SUMF1Q8NBK3 374 aa16.12■□□□□ 0.17
RABGGTA-219ENST00000560871 CPLX3Q8WVH0 158 aa16.12■□□□□ 0.17
RABGGTA-219ENST00000560871 NT5C3BQ969T7 300 aa16.12■□□□□ 0.17
RABGGTA-219ENST00000560871 AZIN2Q96A70 460 aa16.12■□□□□ 0.17
RABGGTA-219ENST00000560871 METTL5Q9NRN9 209 aaKnown RBP16.12■□□□□ 0.17
RABGGTA-219ENST00000560871 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.12■□□□□ 0.17
RABGGTA-219ENST00000560871 ADAM22Q9P0K1 906 aa16.12■□□□□ 0.17
RABGGTA-219ENST00000560871 LUC7L2Q9Y383 392 aaKnown RBP16.12■□□□□ 0.17
RABGGTA-219ENST00000560871 TCRBV5S1A1TA0A578 114 aa16.11■□□□□ 0.17
RABGGTA-219ENST00000560871 CACNG3O60359 315 aa16.11■□□□□ 0.17
RABGGTA-219ENST00000560871 PAPSS2O95340 614 aaPredicted RBP16.11■□□□□ 0.17
RABGGTA-219ENST00000560871 EGFP01133 1207 aa16.11■□□□□ 0.17
RABGGTA-219ENST00000560871 PENKP01210 267 aaPredicted RBP16.11■□□□□ 0.17
RABGGTA-219ENST00000560871 CALB1P05937 261 aa16.11■□□□□ 0.17
RABGGTA-219ENST00000560871 TYRP14679 529 aa16.11■□□□□ 0.17
RABGGTA-219ENST00000560871 TFE3P19532 575 aaPredicted RBP16.11■□□□□ 0.17
RABGGTA-219ENST00000560871 TNFAIP3P21580 790 aa16.11■□□□□ 0.17
RABGGTA-219ENST00000560871 DRD1P21728 446 aa16.11■□□□□ 0.17
RABGGTA-219ENST00000560871 HNRNPH3P31942 346 aaKnown RBP16.11■□□□□ 0.17
RABGGTA-219ENST00000560871 CDK17Q00537 523 aa16.11■□□□□ 0.17
RABGGTA-219ENST00000560871 SATB1Q01826 763 aa16.11■□□□□ 0.17
RABGGTA-219ENST00000560871 ANO4Q32M45 955 aa16.11■□□□□ 0.17
RABGGTA-219ENST00000560871 FAM133BQ5BKY9 247 aaKnown RBP16.11■□□□□ 0.17
RABGGTA-219ENST00000560871 ACAD10Q6JQN1 1059 aa16.11■□□□□ 0.17
RABGGTA-219ENST00000560871 Q6ZS52 159 aa16.11■□□□□ 0.17
RABGGTA-219ENST00000560871 TPGS1Q6ZTW0 290 aa16.11■□□□□ 0.17
RABGGTA-219ENST00000560871 C3orf20Q8ND61 904 aa16.11■□□□□ 0.17
RABGGTA-219ENST00000560871 ATRIPQ8WXE1 791 aa16.11■□□□□ 0.17
RABGGTA-219ENST00000560871 PGAP3Q96FM1 320 aaPredicted RBP16.11■□□□□ 0.17
RABGGTA-219ENST00000560871 BBS2Q9BXC9 721 aa16.11■□□□□ 0.17
RABGGTA-219ENST00000560871 FAM204AQ9H8W3 233 aa16.11■□□□□ 0.17
RABGGTA-219ENST00000560871 RRN3Q9NYV6 651 aa16.11■□□□□ 0.17
RABGGTA-219ENST00000560871 WDR35Q9P2L0 1181 aa16.11■□□□□ 0.17
RABGGTA-219ENST00000560871 NEDD8-MDP1E9PL57 170 aa16.1■□□□□ 0.17
RABGGTA-219ENST00000560871 ACSL4O60488 711 aa16.1■□□□□ 0.17
RABGGTA-219ENST00000560871 TULP3O75386 442 aa16.1■□□□□ 0.17
RABGGTA-219ENST00000560871 SERPING1P05155 500 aa16.1■□□□□ 0.17
RABGGTA-219ENST00000560871 PLEKP08567 350 aaPredicted RBP16.1■□□□□ 0.17
RABGGTA-219ENST00000560871 CHRM1P11229 460 aaPredicted RBP16.1■□□□□ 0.17
RABGGTA-219ENST00000560871 SLC6A11P48066 632 aa16.1■□□□□ 0.17
RABGGTA-219ENST00000560871 SULT1E1P49888 294 aa16.1■□□□□ 0.17
RABGGTA-219ENST00000560871 NRLP54845 237 aa16.1■□□□□ 0.17
RABGGTA-219ENST00000560871 GRSF1Q12849 480 aaKnown RBP eCLIP16.1■□□□□ 0.17
RABGGTA-219ENST00000560871 PPP2R5DQ14738 602 aa16.1■□□□□ 0.17
RABGGTA-219ENST00000560871 TDRD12Q587J7 1177 aaKnown RBP16.1■□□□□ 0.17
RABGGTA-219ENST00000560871 NADSYN1Q6IA69 706 aa16.1■□□□□ 0.17
RABGGTA-219ENST00000560871 PPP1R2P3Q6NXS1 205 aa16.1■□□□□ 0.17
RABGGTA-219ENST00000560871 MCOLN2Q8IZK6 566 aa16.1■□□□□ 0.17
RABGGTA-219ENST00000560871 EMC1Q8N766 993 aa16.1■□□□□ 0.17
RABGGTA-219ENST00000560871 JOSD2Q8TAC2 188 aa16.1■□□□□ 0.17
RABGGTA-219ENST00000560871 EXOC4Q96A65 974 aa16.1■□□□□ 0.17
RABGGTA-219ENST00000560871 PRICKLE1Q96MT3 831 aaPredicted RBP16.1■□□□□ 0.17
RABGGTA-219ENST00000560871 TBCBQ99426 244 aa16.1■□□□□ 0.17
RABGGTA-219ENST00000560871 DNAJC7Q99615 494 aa16.1■□□□□ 0.17
RABGGTA-219ENST00000560871 DDIT4Q9NX09 232 aa16.1■□□□□ 0.17
RABGGTA-219ENST00000560871 ARHGAP20Q9P2F6 1191 aa16.1■□□□□ 0.17
RABGGTA-219ENST00000560871 XPO7Q9UIA9 1087 aaKnown RBP16.1■□□□□ 0.17
RABGGTA-219ENST00000560871 STAP1Q9ULZ2 295 aa16.1■□□□□ 0.17
RABGGTA-219ENST00000560871 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.09■□□□□ 0.17
RABGGTA-219ENST00000560871 M0QYT0 321 aa16.09■□□□□ 0.17
RABGGTA-219ENST00000560871 MFAP3LO75121 409 aa16.09■□□□□ 0.17
RABGGTA-219ENST00000560871 GJB6O95452 261 aa16.09■□□□□ 0.17
RABGGTA-219ENST00000560871 APOEP02649 317 aa16.09■□□□□ 0.17
RABGGTA-219ENST00000560871 GZMAP12544 262 aa16.09■□□□□ 0.17
RABGGTA-219ENST00000560871 SLC6A4P31645 630 aa16.09■□□□□ 0.17
RABGGTA-219ENST00000560871 SLC11A2P49281 568 aa16.09■□□□□ 0.17
RABGGTA-219ENST00000560871 SGSHP51688 502 aa16.09■□□□□ 0.17
RABGGTA-219ENST00000560871 RNASE9P60153 205 aaKnown RBP16.09■□□□□ 0.17
RABGGTA-219ENST00000560871 TBX2Q13207 712 aaPredicted RBP16.09■□□□□ 0.17
RABGGTA-219ENST00000560871 SLC25A52Q3SY17 297 aa16.09■□□□□ 0.17
RABGGTA-219ENST00000560871 ZC3H12AQ5D1E8 599 aaKnown RBP16.09■□□□□ 0.17
RABGGTA-219ENST00000560871 PPP1R15BQ5SWA1 713 aa16.09■□□□□ 0.17
RABGGTA-219ENST00000560871 ADGRF1Q5T601 910 aa16.09■□□□□ 0.17
RABGGTA-219ENST00000560871 RNF43Q68DV7 783 aa16.09■□□□□ 0.17
RABGGTA-219ENST00000560871 WDR59Q6PJI9 974 aa16.09■□□□□ 0.17
RABGGTA-219ENST00000560871 PHLDB2Q86SQ0 1253 aa16.09■□□□□ 0.17
RABGGTA-219ENST00000560871 SFTPA1Q8IWL2 248 aa16.09■□□□□ 0.17
RABGGTA-219ENST00000560871 NAT16Q8N8M0 369 aa16.09■□□□□ 0.17
RABGGTA-219ENST00000560871 PNKPQ96T60 521 aa16.09■□□□□ 0.17
RABGGTA-219ENST00000560871 TRIM5Q9C035 493 aa16.09■□□□□ 0.17
RABGGTA-219ENST00000560871 PIGVQ9NUD9 493 aa16.09■□□□□ 0.17
RABGGTA-219ENST00000560871 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms