RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 CAV1Q03135 178 aa20.24■□□□□ 0.83
RBFOX1-215ENST00000553186 TMEM240Q5SV17 173 aa20.24■□□□□ 0.83
RBFOX1-215ENST00000553186 IZUMO3Q5VZ72 239 aa20.24■□□□□ 0.83
RBFOX1-215ENST00000553186 HIBCHQ6NVY1 386 aaPredicted RBP20.24■□□□□ 0.83
RBFOX1-215ENST00000553186 VPS52Q8N1B4 723 aa20.24■□□□□ 0.83
RBFOX1-215ENST00000553186 BBOF1Q8ND07 529 aa20.24■□□□□ 0.83
RBFOX1-215ENST00000553186 GIPC2Q8TF65 315 aa20.24■□□□□ 0.83
RBFOX1-215ENST00000553186 ACBD3Q9H3P7 528 aa20.24■□□□□ 0.83
RBFOX1-215ENST00000553186 CLIC5Q9NZA1 410 aa20.24■□□□□ 0.83
RBFOX1-215ENST00000553186 ANAPC5Q9UJX4 755 aa20.24■□□□□ 0.83
RBFOX1-215ENST00000553186 H3BQF6 201 aa20.24■□□□□ 0.83
RBFOX1-215ENST00000553186 H7C0C1 242 aa20.24■□□□□ 0.83
RBFOX1-215ENST00000553186 DNALI1O14645 258 aaPredicted RBP20.24■□□□□ 0.83
RBFOX1-215ENST00000553186 SEC24AO95486 1093 aa20.24■□□□□ 0.83
RBFOX1-215ENST00000553186 ATP5OP48047 213 aa20.24■□□□□ 0.83
RBFOX1-215ENST00000553186 TUFMP49411 452 aaKnown RBP20.24■□□□□ 0.83
RBFOX1-215ENST00000553186 NRLP54845 237 aa20.24■□□□□ 0.83
RBFOX1-215ENST00000553186 BRMS1LQ5PSV4 323 aa20.24■□□□□ 0.83
RBFOX1-215ENST00000553186 RASIP1Q5U651 963 aa20.24■□□□□ 0.83
RBFOX1-215ENST00000553186 CEP295NLQ96MC4 621 aa20.24■□□□□ 0.83
RBFOX1-215ENST00000553186 OLFM3Q96PB7 478 aa20.24■□□□□ 0.83
RBFOX1-215ENST00000553186 ZIM3Q96PE6 472 aa20.24■□□□□ 0.83
RBFOX1-215ENST00000553186 TTLL2Q9BWV7 592 aa20.24■□□□□ 0.83
RBFOX1-215ENST00000553186 HSFX1Q9UBD0 423 aa20.24■□□□□ 0.83
RBFOX1-215ENST00000553186 OR12D3Q9UGF7 316 aa20.24■□□□□ 0.83
RBFOX1-215ENST00000553186 ATP8A1Q9Y2Q0 1164 aa20.24■□□□□ 0.83
RBFOX1-215ENST00000553186 BCLAF3A2AJT9 711 aaKnown RBP20.23■□□□□ 0.83
RBFOX1-215ENST00000553186 SLC38A8A6NNN8 435 aa20.23■□□□□ 0.83
RBFOX1-215ENST00000553186 DCLK1O15075 740 aa20.23■□□□□ 0.83
RBFOX1-215ENST00000553186 ZDHHC11BP0C7U3 371 aa20.23■□□□□ 0.83
RBFOX1-215ENST00000553186 RPL22P35268 128 aaKnown RBP20.23■□□□□ 0.83
RBFOX1-215ENST00000553186 PPM1AP35813 382 aa20.23■□□□□ 0.83
RBFOX1-215ENST00000553186 GGCXP38435 758 aa20.23■□□□□ 0.83
RBFOX1-215ENST00000553186 XRCC4Q13426 336 aa20.23■□□□□ 0.83
RBFOX1-215ENST00000553186 TPGS2Q68CL5 300 aa20.23■□□□□ 0.83
RBFOX1-215ENST00000553186 RNF34Q969K3 372 aa20.23■□□□□ 0.83
RBFOX1-215ENST00000553186 RTP4Q96DX8 246 aa20.23■□□□□ 0.83
RBFOX1-215ENST00000553186 OSBPL2Q9H1P3 480 aa20.23■□□□□ 0.83
RBFOX1-215ENST00000553186 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.23■□□□□ 0.83
RBFOX1-215ENST00000553186 SNX10Q9Y5X0 201 aa20.23■□□□□ 0.83
RBFOX1-215ENST00000553186 ALPK3Q96L96 1907 aa20.22■□□□□ 0.83
RBFOX1-215ENST00000553186 URODP06132 367 aa20.22■□□□□ 0.83
RBFOX1-215ENST00000553186 CCR1P32246 355 aa20.22■□□□□ 0.83
RBFOX1-215ENST00000553186 PSEN1P49768 467 aa20.22■□□□□ 0.83
RBFOX1-215ENST00000553186 PPP2R5DQ14738 602 aa20.22■□□□□ 0.83
RBFOX1-215ENST00000553186 CFAP58Q5T655 872 aa20.22■□□□□ 0.83
RBFOX1-215ENST00000553186 SERPINB11Q96P15 392 aa20.22■□□□□ 0.83
RBFOX1-215ENST00000553186 EPB41L4BQ9H329 900 aa20.22■□□□□ 0.83
RBFOX1-215ENST00000553186 TLR8Q9NR97 1041 aaKnown RBP20.22■□□□□ 0.83
RBFOX1-215ENST00000553186 SYF2O95926 243 aaKnown RBP20.22■□□□□ 0.83
RBFOX1-215ENST00000553186 RBL1P28749 1068 aa20.22■□□□□ 0.83
RBFOX1-215ENST00000553186 CHKAP35790 457 aa20.22■□□□□ 0.83
RBFOX1-215ENST00000553186 ZNF135P52742 658 aaPredicted RBP20.22■□□□□ 0.83
RBFOX1-215ENST00000553186 RAB33AQ14088 237 aa20.22■□□□□ 0.83
RBFOX1-215ENST00000553186 PAFAH1B3Q15102 231 aaKnown RBP20.22■□□□□ 0.83
RBFOX1-215ENST00000553186 SPDYCQ5MJ68 293 aa20.22■□□□□ 0.83
RBFOX1-215ENST00000553186 LRRN4Q8WUT4 740 aa20.22■□□□□ 0.83
RBFOX1-215ENST00000553186 AUTS2Q8WXX7 1259 aa20.22■□□□□ 0.83
RBFOX1-215ENST00000553186 CLP1Q92989 425 aaKnown RBP20.22■□□□□ 0.83
RBFOX1-215ENST00000553186 SLC39A13Q96H72 371 aa20.22■□□□□ 0.83
RBFOX1-215ENST00000553186 HAPLN3Q96S86 360 aa20.22■□□□□ 0.83
RBFOX1-215ENST00000553186 TPX2Q9ULW0 747 aaKnown RBP20.22■□□□□ 0.83
RBFOX1-215ENST00000553186 PCDHB12Q9Y5F1 795 aa20.22■□□□□ 0.83
RBFOX1-215ENST00000553186 MYO16Q9Y6X6 1858 aa20.22■□□□□ 0.83
RBFOX1-215ENST00000553186 KCNU1A8MYU2 1149 aa20.21■□□□□ 0.83
RBFOX1-215ENST00000553186 MFSD11O43934 449 aa20.21■□□□□ 0.83
RBFOX1-215ENST00000553186 LILRB3O75022 631 aa20.21■□□□□ 0.83
RBFOX1-215ENST00000553186 FGF18O76093 207 aa20.21■□□□□ 0.83
RBFOX1-215ENST00000553186 LRIG2O94898 1065 aa20.21■□□□□ 0.83
RBFOX1-215ENST00000553186 RARGP13631 454 aa20.21■□□□□ 0.83
RBFOX1-215ENST00000553186 ERCC2P18074 760 aa20.21■□□□□ 0.83
RBFOX1-215ENST00000553186 PMS2P54278 862 aa20.21■□□□□ 0.83
RBFOX1-215ENST00000553186 TPI1P60174 286 aa20.21■□□□□ 0.83
RBFOX1-215ENST00000553186 ARTNQ5T4W7 220 aa20.21■□□□□ 0.83
RBFOX1-215ENST00000553186 RNASEH2BQ5TBB1 312 aaKnown RBP20.21■□□□□ 0.83
RBFOX1-215ENST00000553186 C7orf61Q8IZ16 206 aa20.21■□□□□ 0.83
RBFOX1-215ENST00000553186 TLR6Q9Y2C9 796 aa20.21■□□□□ 0.83
RBFOX1-215ENST00000553186 INSL6Q9Y581 213 aa20.21■□□□□ 0.83
RBFOX1-215ENST00000553186 CFAP69A5D8W1 941 aa20.21■□□□□ 0.83
RBFOX1-215ENST00000553186 H0YGN5 161 aa20.21■□□□□ 0.83
RBFOX1-215ENST00000553186 GPS2Q13227 327 aa20.21■□□□□ 0.83
RBFOX1-215ENST00000553186 SLMAPQ14BN4 828 aa20.21■□□□□ 0.83
RBFOX1-215ENST00000553186 SLC45A4Q5BKX6 768 aa20.21■□□□□ 0.83
RBFOX1-215ENST00000553186 GPR65Q8IYL9 337 aa20.21■□□□□ 0.83
RBFOX1-215ENST00000553186 FIBCD1Q8N539 461 aa20.21■□□□□ 0.83
RBFOX1-215ENST00000553186 CCDC33Q8N5R6 958 aa20.21■□□□□ 0.83
RBFOX1-215ENST00000553186 UBLCP1Q8WVY7 318 aaPredicted RBP20.21■□□□□ 0.83
RBFOX1-215ENST00000553186 PWWP2AQ96N64 755 aa20.21■□□□□ 0.83
RBFOX1-215ENST00000553186 EPAS1Q99814 870 aa20.21■□□□□ 0.83
RBFOX1-215ENST00000553186 NEU3Q9UQ49 428 aa20.21■□□□□ 0.83
RBFOX1-215ENST00000553186 FARP1Q9Y4F1 1045 aaPredicted RBP20.21■□□□□ 0.83
RBFOX1-215ENST00000553186 NFS1Q9Y697 457 aa20.21■□□□□ 0.83
RBFOX1-215ENST00000553186 KCNN4O15554 427 aa20.2■□□□□ 0.82
RBFOX1-215ENST00000553186 PAGE1O75459 146 aa20.2■□□□□ 0.82
RBFOX1-215ENST00000553186 TBX18O95935 607 aa20.2■□□□□ 0.82
RBFOX1-215ENST00000553186 DNAJB2P25686 324 aa20.2■□□□□ 0.82
RBFOX1-215ENST00000553186 FAM193AP78312 1265 aa20.2■□□□□ 0.82
RBFOX1-215ENST00000553186 PSRC1Q6PGN9 363 aaPredicted RBP20.2■□□□□ 0.82
RBFOX1-215ENST00000553186 QKIQ96PU8 341 aaKnown RBP eCLIP20.2■□□□□ 0.82
RBFOX1-215ENST00000553186 UBE2OQ9C0C9 1292 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms