RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 MAMLD1Q13495 774 aa20.19■□□□□ 0.82
DDX55-207ENST00000540763 ADGRF1Q5T601 910 aa20.19■□□□□ 0.82
DDX55-207ENST00000540763 IER5LQ5T953 404 aa20.19■□□□□ 0.82
DDX55-207ENST00000540763 RHBDF2Q6PJF5 856 aa20.19■□□□□ 0.82
DDX55-207ENST00000540763 SND1Q7KZF4 910 aaKnown RBP eCLIP20.19■□□□□ 0.82
DDX55-207ENST00000540763 STRADAQ7RTN6 431 aa20.19■□□□□ 0.82
DDX55-207ENST00000540763 ATP6V0D2Q8N8Y2 350 aa20.19■□□□□ 0.82
DDX55-207ENST00000540763 JOSD2Q8TAC2 188 aa20.19■□□□□ 0.82
DDX55-207ENST00000540763 ZNF653Q96CK0 615 aa20.19■□□□□ 0.82
DDX55-207ENST00000540763 CFAP57Q96MR6 1250 aa20.19■□□□□ 0.82
DDX55-207ENST00000540763 NELL2Q99435 816 aa20.19■□□□□ 0.82
DDX55-207ENST00000540763 CHP1Q99653 195 aa20.19■□□□□ 0.82
DDX55-207ENST00000540763 DDX50Q9BQ39 737 aaKnown RBP20.19■□□□□ 0.82
DDX55-207ENST00000540763 GRPEL1Q9HAV7 217 aa20.19■□□□□ 0.82
DDX55-207ENST00000540763 MRPL47Q9HD33 250 aaKnown RBP20.19■□□□□ 0.82
DDX55-207ENST00000540763 CNOT8Q9UFF9 292 aaKnown RBP20.19■□□□□ 0.82
DDX55-207ENST00000540763 SLC12A6Q9UHW9 1150 aa20.19■□□□□ 0.82
DDX55-207ENST00000540763 KMT2EQ8IZD2 1858 aa20.19■□□□□ 0.82
DDX55-207ENST00000540763 KANSL1LA0AUZ9 987 aa20.18■□□□□ 0.82
DDX55-207ENST00000540763 SHISA7A6NL88 538 aa20.18■□□□□ 0.82
DDX55-207ENST00000540763 KCNU1A8MYU2 1149 aa20.18■□□□□ 0.82
DDX55-207ENST00000540763 GFRA2O00451 464 aa20.18■□□□□ 0.82
DDX55-207ENST00000540763 ACSL4O60488 711 aa20.18■□□□□ 0.82
DDX55-207ENST00000540763 DESP17661 470 aa20.18■□□□□ 0.82
DDX55-207ENST00000540763 GPD1P21695 349 aa20.18■□□□□ 0.82
DDX55-207ENST00000540763 RDXP35241 583 aaKnown RBP20.18■□□□□ 0.82
DDX55-207ENST00000540763 RFC1P35251 1148 aaPredicted RBP20.18■□□□□ 0.82
DDX55-207ENST00000540763 CXCR3P49682 368 aa20.18■□□□□ 0.82
DDX55-207ENST00000540763 DEUP1Q05D60 604 aa20.18■□□□□ 0.82
DDX55-207ENST00000540763 LY6G5CQ5SRR4 150 aa20.18■□□□□ 0.82
DDX55-207ENST00000540763 CCDC122Q5T0U0 273 aa20.18■□□□□ 0.82
DDX55-207ENST00000540763 ACBD5Q5T8D3 534 aaPredicted RBP20.18■□□□□ 0.82
DDX55-207ENST00000540763 DCUN1D2Q6PH85 259 aa20.18■□□□□ 0.82
DDX55-207ENST00000540763 SUGP1Q8IWZ8 645 aaKnown RBP20.18■□□□□ 0.82
DDX55-207ENST00000540763 EMC1Q8N766 993 aa20.18■□□□□ 0.82
DDX55-207ENST00000540763 FNIP1Q8TF40 1166 aa20.18■□□□□ 0.82
DDX55-207ENST00000540763 RXFP2Q8WXD0 754 aa20.18■□□□□ 0.82
DDX55-207ENST00000540763 FAM3CQ92520 227 aa20.18■□□□□ 0.82
DDX55-207ENST00000540763 MCEEQ96PE7 176 aa20.18■□□□□ 0.82
DDX55-207ENST00000540763 TBCBQ99426 244 aa20.18■□□□□ 0.82
DDX55-207ENST00000540763 ADAM33Q9BZ11 813 aa20.18■□□□□ 0.82
DDX55-207ENST00000540763 MFSD1Q9H3U5 465 aa20.18■□□□□ 0.82
DDX55-207ENST00000540763 TBC1D17Q9HA65 648 aa20.18■□□□□ 0.82
DDX55-207ENST00000540763 WDFY4Q6ZS81 3184 aa20.18■□□□□ 0.82
DDX55-207ENST00000540763 F5P12259 2224 aa20.17■□□□□ 0.82
DDX55-207ENST00000540763 TRDMT1O14717 391 aaKnown RBP20.17■□□□□ 0.82
DDX55-207ENST00000540763 ABCB4P21439 1286 aa20.17■□□□□ 0.82
DDX55-207ENST00000540763 ZNF143P52747 638 aaPredicted RBP20.17■□□□□ 0.82
DDX55-207ENST00000540763 GFPT1Q06210 699 aaPredicted RBP20.17■□□□□ 0.82
DDX55-207ENST00000540763 NME3Q13232 169 aa20.17■□□□□ 0.82
DDX55-207ENST00000540763 GAB4Q2WGN9 574 aa20.17■□□□□ 0.82
DDX55-207ENST00000540763 CCDC14Q49A88 953 aa20.17■□□□□ 0.82
DDX55-207ENST00000540763 ZC3H12AQ5D1E8 599 aaKnown RBP20.17■□□□□ 0.82
DDX55-207ENST00000540763 CCDC170Q8IYT3 715 aa20.17■□□□□ 0.82
DDX55-207ENST00000540763 CENPIQ92674 756 aaPredicted RBP20.17■□□□□ 0.82
DDX55-207ENST00000540763 PBXIP1Q96AQ6 731 aa20.17■□□□□ 0.82
DDX55-207ENST00000540763 CHFRQ96EP1 664 aa20.17■□□□□ 0.82
DDX55-207ENST00000540763 LTB4R2Q9NPC1 389 aa20.17■□□□□ 0.82
DDX55-207ENST00000540763 PIGVQ9NUD9 493 aa20.17■□□□□ 0.82
DDX55-207ENST00000540763 ARHGEF38Q9NXL2 777 aa20.17■□□□□ 0.82
DDX55-207ENST00000540763 CALCOCO1Q9P1Z2 691 aa20.17■□□□□ 0.82
DDX55-207ENST00000540763 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.16■□□□□ 0.82
DDX55-207ENST00000540763 CACNG3O60359 315 aa20.16■□□□□ 0.82
DDX55-207ENST00000540763 PENKP01210 267 aaPredicted RBP20.16■□□□□ 0.82
DDX55-207ENST00000540763 CYBBP04839 570 aa20.16■□□□□ 0.82
DDX55-207ENST00000540763 TFE3P19532 575 aaPredicted RBP20.16■□□□□ 0.82
DDX55-207ENST00000540763 SOX9P48436 509 aa20.16■□□□□ 0.82
DDX55-207ENST00000540763 CLCN5P51795 746 aa20.16■□□□□ 0.82
DDX55-207ENST00000540763 RPL7AP62424 266 aaKnown RBP20.16■□□□□ 0.82
DDX55-207ENST00000540763 PREPLQ4J6C6 727 aaPredicted RBP20.16■□□□□ 0.82
DDX55-207ENST00000540763 FAM133BQ5BKY9 247 aaKnown RBP20.16■□□□□ 0.82
DDX55-207ENST00000540763 C10orf76Q5T2E6 689 aa20.16■□□□□ 0.82
DDX55-207ENST00000540763 CWF19L1Q69YN2 538 aaKnown RBP20.16■□□□□ 0.82
DDX55-207ENST00000540763 PHLDB2Q86SQ0 1253 aa20.16■□□□□ 0.82
DDX55-207ENST00000540763 TMEM25Q86YD3 366 aa20.16■□□□□ 0.82
DDX55-207ENST00000540763 ETFBKMTQ8IXQ9 262 aa20.16■□□□□ 0.82
DDX55-207ENST00000540763 PJA1Q8NG27 643 aa20.16■□□□□ 0.82
DDX55-207ENST00000540763 CNPY3Q9BT09 278 aa20.16■□□□□ 0.82
DDX55-207ENST00000540763 WDCPQ9H6R7 721 aa20.16■□□□□ 0.82
DDX55-207ENST00000540763 TMEM191CA6NGB0 347 aa20.15■□□□□ 0.82
DDX55-207ENST00000540763 ATMINO43313 823 aaPredicted RBP20.15■□□□□ 0.82
DDX55-207ENST00000540763 GJB6O95452 261 aa20.15■□□□□ 0.82
DDX55-207ENST00000540763 CYP1A2P05177 515 aa20.15■□□□□ 0.82
DDX55-207ENST00000540763 OPRD1P41143 372 aa20.15■□□□□ 0.82
DDX55-207ENST00000540763 MAGEA9P43362 315 aa20.15■□□□□ 0.82
DDX55-207ENST00000540763 GALCP54803 685 aa20.15■□□□□ 0.82
DDX55-207ENST00000540763 GSDMDP57764 484 aa20.15■□□□□ 0.82
DDX55-207ENST00000540763 MPPE1Q53F39 396 aa20.15■□□□□ 0.82
DDX55-207ENST00000540763 TMEM196Q5HYL7 178 aa20.15■□□□□ 0.82
DDX55-207ENST00000540763 MPP7Q5T2T1 576 aa20.15■□□□□ 0.82
DDX55-207ENST00000540763 RNF43Q68DV7 783 aa20.15■□□□□ 0.82
DDX55-207ENST00000540763 NADSYN1Q6IA69 706 aa20.15■□□□□ 0.82
DDX55-207ENST00000540763 TXNDC11Q6PKC3 985 aa20.15■□□□□ 0.82
DDX55-207ENST00000540763 TMTC1Q8IUR5 882 aa20.15■□□□□ 0.82
DDX55-207ENST00000540763 ZNF687Q8N1G0 1237 aa20.15■□□□□ 0.82
DDX55-207ENST00000540763 FBXL6Q8N531 539 aa20.15■□□□□ 0.82
DDX55-207ENST00000540763 TTC8Q8TAM2 541 aa20.15■□□□□ 0.82
DDX55-207ENST00000540763 CD101Q93033 1021 aa20.15■□□□□ 0.82
DDX55-207ENST00000540763 RNF34Q969K3 372 aa20.15■□□□□ 0.82
DDX55-207ENST00000540763 XPO6Q96QU8 1125 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms