RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 LIPMQ5VYY2 423 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 C9orf57Q5W0N0 161 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 PMS2CLQ68D20 193 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 CLEC9AQ6UXN8 241 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 LIN28BQ6ZN17 250 aaKnown RBP eCLIP1.02□□□□□ -2.256e-8■■□□□ 11.4
COPB1-212ENST00000534771 USP49Q70CQ1 688 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 CREB3L2Q70SY1 520 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 H1FNTQ75WM6 255 aaPredicted RBP1.02□□□□□ -2.25
COPB1-212ENST00000534771 DDX42Q86XP3 938 aaKnown RBP eCLIP1.02□□□□□ -2.252e-15■■■■■ 26.8
COPB1-212ENST00000534771 P3H2Q8IVL5 708 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 SPATA31A7Q8IWB4 1347 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 METTL25Q8N6Q8 603 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 CTCFLQ8NI51 663 aaPredicted RBP1.02□□□□□ -2.25
COPB1-212ENST00000534771 SMCR8Q8TEV9 937 aaPredicted RBP1.02□□□□□ -2.25
COPB1-212ENST00000534771 KBTBD7Q8WVZ9 684 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 SPSB4Q96A44 273 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 EME1Q96AY2 570 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 PRR11Q96HE9 360 aaPredicted RBP1.02□□□□□ -2.25
COPB1-212ENST00000534771 ZNF668Q96K58 619 aaPredicted RBP1.02□□□□□ -2.25
COPB1-212ENST00000534771 HIST1H2AAQ96QV6 131 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 EPYCQ99645 322 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 SENP7Q9BQF6 1050 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 FAM126AQ9BYI3 521 aaPredicted RBP1.02□□□□□ -2.25
COPB1-212ENST00000534771 SLC13A1Q9BZW2 595 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 SPRY4Q9C004 299 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 ZNF518BQ9C0D4 1074 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 DDX31Q9H8H2 851 aaKnown RBP1.02□□□□□ -2.25
COPB1-212ENST00000534771 SDF2L1Q9HCN8 221 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 A1CFQ9NQ94 594 aaKnown RBP1.02□□□□□ -2.25
COPB1-212ENST00000534771 IGSF9Q9P2J2 1179 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 PLEKHB1Q9UF11 243 aaPredicted RBP1.02□□□□□ -2.25
COPB1-212ENST00000534771 LAMP3Q9UQV4 416 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 DTX4Q9Y2E6 619 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 STXBP5LQ9Y2K9 1186 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 SMAD5-AS1Q9Y6J3 95 aa1.02□□□□□ -2.25
COPB1-212ENST00000534771 TNKSO95271 1327 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 IGKV3D-20A0A0C4DH25 116 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 A0A1W2PPL8 197 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 PLSCR5A0PG75 271 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 GAGE12JA6NER3 117 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 FAM227AF5H4B4 570 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 H7C4K7 107 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 AGPSO00116 658 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 PRYO14603 147 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 MDM4O15151 490 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 RGS14O43566 566 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 SPRY3O43610 288 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 BUB3O43684 328 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 RASSF9O75901 435 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 PIAS2O75928 621 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 SGPL1O95470 568 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 MAP4K4O95819 1239 aaPredicted RBP1.01□□□□□ -2.25
COPB1-212ENST00000534771 ALDH2P05091 517 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 SLC3A2P08195 630 aaKnown RBP1.01□□□□□ -2.25
COPB1-212ENST00000534771 SNRNP70P08621 437 aaKnown RBP1.01□□□□□ -2.25
COPB1-212ENST00000534771 ARSBP15848 533 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 AKAP5P24588 427 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 HOXC13P31276 330 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 RECQLP46063 649 aaPredicted RBP1.01□□□□□ -2.25
COPB1-212ENST00000534771 PTDSS1P48651 473 aaKnown RBP1.01□□□□□ -2.25
COPB1-212ENST00000534771 ZNF84P51523 738 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 GUCY2FP51841 1108 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 RAB1AP62820 205 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 ACSM2AQ08AH3 577 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 STK3Q13188 491 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 GPS2Q13227 327 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 GAB1Q13480 694 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 SLC39A14Q15043 492 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 GLE1Q53GS7 698 aaKnown RBP1.01□□□□□ -2.25
COPB1-212ENST00000534771 TDRD12Q587J7 1177 aaKnown RBP1.01□□□□□ -2.25
COPB1-212ENST00000534771 TTC39AQ5SRH9 613 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 FNBP1LQ5T0N5 605 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 LCE3EQ5T5B0 92 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 EGFLAMQ63HQ2 1017 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 ZNF772Q68DY9 489 aaPredicted RBP1.01□□□□□ -2.25
COPB1-212ENST00000534771 HMBOX1Q6NT76 420 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 SWSAP1Q6NVH7 229 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 MEX3BQ6ZN04 569 aaKnown RBP1.01□□□□□ -2.25
COPB1-212ENST00000534771 SLC16A12Q6ZSM3 486 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 CATIPQ7Z7H3 387 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 NOP9Q86U38 636 aaKnown RBP1.01□□□□□ -2.25
COPB1-212ENST00000534771 MYPOPQ86VE0 399 aaPredicted RBP1.01□□□□□ -2.25
COPB1-212ENST00000534771 RHPN2Q8IUC4 686 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 DDIASQ8IXT1 998 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 CADM3Q8N126 398 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 CLIP4Q8N3C7 705 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 FSTL5Q8N475 847 aaPredicted RBP1.01□□□□□ -2.25
COPB1-212ENST00000534771 RFLNBQ8N5W9 214 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 FAM47BQ8NA70 645 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 ZNF485Q8NCK3 441 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 PLBD2Q8NHP8 589 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 MAML1Q92585 1016 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 AKAP1Q92667 903 aaKnown RBP eCLIP1.01□□□□□ -2.25
COPB1-212ENST00000534771 GJA10Q969M2 543 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 MVB12AQ96EY5 273 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 IGSF21Q96ID5 467 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 CLMNQ96JQ2 1002 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 DUX3Q96PT4 197 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 CGRRF1Q99675 332 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 C1QTNF5Q9BXJ0 243 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms