RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 SCARA5Q6ZMJ2 495 aa13.04□□□□□ -0.32
CAPN1-223ENST00000533079 CLEC20AQ6ZU45 233 aa13.04□□□□□ -0.32
CAPN1-223ENST00000533079 FAM124AQ86V42 546 aa13.04□□□□□ -0.32
CAPN1-223ENST00000533079 C12orf56Q8IXR9 622 aa13.04□□□□□ -0.32
CAPN1-223ENST00000533079 ZNF516Q92618 1163 aa13.04□□□□□ -0.32
CAPN1-223ENST00000533079 GOLGA1Q92805 767 aa13.04□□□□□ -0.32
CAPN1-223ENST00000533079 BIRC7Q96CA5 298 aa13.04□□□□□ -0.32
CAPN1-223ENST00000533079 GZF1Q9H116 711 aaPredicted RBP13.04□□□□□ -0.32
CAPN1-223ENST00000533079 CUEDC2Q9H467 287 aa13.04□□□□□ -0.32
CAPN1-223ENST00000533079 SLCO1B1Q9Y6L6 691 aa13.04□□□□□ -0.32
CAPN1-223ENST00000533079 HHLA1C9JL84 531 aa13.03□□□□□ -0.32
CAPN1-223ENST00000533079 VILLO15195 856 aa13.03□□□□□ -0.32
CAPN1-223ENST00000533079 DNTTP04053 509 aa13.03□□□□□ -0.32
CAPN1-223ENST00000533079 CORO1AP31146 461 aaKnown RBP13.03□□□□□ -0.32
CAPN1-223ENST00000533079 ZNF445P59923 1031 aa13.03□□□□□ -0.32
CAPN1-223ENST00000533079 CLDN10P78369 228 aa13.03□□□□□ -0.32
CAPN1-223ENST00000533079 AMPD3Q01432 767 aa13.03□□□□□ -0.32
CAPN1-223ENST00000533079 SEMG2Q02383 582 aa13.03□□□□□ -0.32
CAPN1-223ENST00000533079 CFHR1Q03591 330 aa13.03□□□□□ -0.32
CAPN1-223ENST00000533079 NCOA4Q13772 614 aa13.03□□□□□ -0.32
CAPN1-223ENST00000533079 FAM26FQ5R3K3 315 aa13.03□□□□□ -0.32
CAPN1-223ENST00000533079 CNNM4Q6P4Q7 775 aa13.03□□□□□ -0.32
CAPN1-223ENST00000533079 GPRIN1Q7Z2K8 1008 aa13.03□□□□□ -0.32
CAPN1-223ENST00000533079 FAM217AQ8IXS0 508 aa13.03□□□□□ -0.32
CAPN1-223ENST00000533079 CACTIN-AS1Q8N1I8 211 aa13.03□□□□□ -0.32
CAPN1-223ENST00000533079 WFIKKN2Q8TEU8 576 aa13.03□□□□□ -0.32
CAPN1-223ENST00000533079 TAF4BQ92750 862 aa13.03□□□□□ -0.32
CAPN1-223ENST00000533079 WBP1Q96G27 269 aa13.03□□□□□ -0.32
CAPN1-223ENST00000533079 P2RY11Q96G91 374 aa13.03□□□□□ -0.32
CAPN1-223ENST00000533079 ELF4Q99607 663 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-223ENST00000533079 HNRNPABQ99729 332 aaKnown RBP13.03□□□□□ -0.32
CAPN1-223ENST00000533079 DNAI2Q9GZS0 605 aa13.03□□□□□ -0.32
CAPN1-223ENST00000533079 SDCBP2Q9H190 292 aa13.03□□□□□ -0.32
CAPN1-223ENST00000533079 TMEM245Q9H330 911 aa13.03□□□□□ -0.32
CAPN1-223ENST00000533079 NMUR1Q9HB89 426 aa13.03□□□□□ -0.32
CAPN1-223ENST00000533079 NAGPAQ9UK23 515 aa13.03□□□□□ -0.32
CAPN1-223ENST00000533079 SCML1Q9UN30 329 aa13.03□□□□□ -0.32
CAPN1-223ENST00000533079 CLIC4Q9Y696 253 aa13.03□□□□□ -0.32
CAPN1-223ENST00000533079 AK5Q9Y6K8 562 aa13.03□□□□□ -0.32
CAPN1-223ENST00000533079 MYH10P35580 1976 aa13.02□□□□□ -0.32
CAPN1-223ENST00000533079 TP53BP1Q12888 1972 aaPredicted RBP13.02□□□□□ -0.32
CAPN1-223ENST00000533079 MDM4O15151 490 aa13.02□□□□□ -0.33
CAPN1-223ENST00000533079 FSBPO95073 299 aa13.02□□□□□ -0.33
CAPN1-223ENST00000533079 LDOC1O95751 146 aaPredicted RBP13.02□□□□□ -0.33
CAPN1-223ENST00000533079 KLKB1P03952 638 aa13.02□□□□□ -0.33
CAPN1-223ENST00000533079 ACTN2P35609 894 aa13.02□□□□□ -0.33
CAPN1-223ENST00000533079 ACADVLP49748 655 aa13.02□□□□□ -0.33
CAPN1-223ENST00000533079 NDST1P52848 882 aa13.02□□□□□ -0.33
CAPN1-223ENST00000533079 SFSWAPQ12872 951 aaKnown RBP13.02□□□□□ -0.33
CAPN1-223ENST00000533079 SGSM1Q2NKQ1 1148 aa13.02□□□□□ -0.33
CAPN1-223ENST00000533079 HES3Q5TGS1 186 aa13.02□□□□□ -0.33
CAPN1-223ENST00000533079 USP30Q70CQ3 517 aa13.02□□□□□ -0.33
CAPN1-223ENST00000533079 ARHGAP18Q8N392 663 aa13.02□□□□□ -0.33
CAPN1-223ENST00000533079 CNDP2Q96KP4 475 aaKnown RBP13.02□□□□□ -0.33
CAPN1-223ENST00000533079 CLIC6Q96NY7 704 aa13.02□□□□□ -0.33
CAPN1-223ENST00000533079 FAM49BQ9NUQ9 324 aa13.02□□□□□ -0.33
CAPN1-223ENST00000533079 KBTBD4Q9NVX7 518 aa13.02□□□□□ -0.33
CAPN1-223ENST00000533079 AGO1Q9UL18 857 aaKnown RBP13.02□□□□□ -0.33
CAPN1-223ENST00000533079 STRIP2Q9ULQ0 834 aa13.02□□□□□ -0.33
CAPN1-223ENST00000533079 TPX2Q9ULW0 747 aaKnown RBP13.02□□□□□ -0.33
CAPN1-223ENST00000533079 PLA2G4CQ9UP65 541 aa13.02□□□□□ -0.33
CAPN1-223ENST00000533079 MTMR6Q9Y217 621 aa13.02□□□□□ -0.33
CAPN1-223ENST00000533079 ATMQ13315 3056 aa13.02□□□□□ -0.33
CAPN1-223ENST00000533079 URB1O60287 2271 aaKnown RBP13.02□□□□□ -0.33
CAPN1-223ENST00000533079 MAST4O15021 2626 aa13.01□□□□□ -0.33
CAPN1-223ENST00000533079 A0A087X0B3 334 aa13.01□□□□□ -0.33
CAPN1-223ENST00000533079 RPN1P04843 607 aaKnown RBP13.01□□□□□ -0.33
CAPN1-223ENST00000533079 ITGAVP06756 1048 aa13.01□□□□□ -0.33
CAPN1-223ENST00000533079 ABCB4P21439 1286 aa13.01□□□□□ -0.33
CAPN1-223ENST00000533079 ADORA2BP29275 332 aa13.01□□□□□ -0.33
CAPN1-223ENST00000533079 KIF11P52732 1056 aa13.01□□□□□ -0.33
CAPN1-223ENST00000533079 UCNP55089 124 aa13.01□□□□□ -0.33
CAPN1-223ENST00000533079 IL9RQ01113 521 aa13.01□□□□□ -0.33
CAPN1-223ENST00000533079 TLE3Q04726 772 aa13.01□□□□□ -0.33
CAPN1-223ENST00000533079 INCA1Q0VD86 236 aa13.01□□□□□ -0.33
CAPN1-223ENST00000533079 TARDBPQ13148 414 aaKnown RBP eCLIP13.01□□□□□ -0.33
CAPN1-223ENST00000533079 FNDC3BQ53EP0 1204 aaKnown RBP13.01□□□□□ -0.33
CAPN1-223ENST00000533079 MPPE1Q53F39 396 aa13.01□□□□□ -0.33
CAPN1-223ENST00000533079 TMEM215Q68D42 235 aa13.01□□□□□ -0.33
CAPN1-223ENST00000533079 ZNF776Q68DI1 518 aaPredicted RBP13.01□□□□□ -0.33
CAPN1-223ENST00000533079 FBXL19Q6PCT2 694 aa13.01□□□□□ -0.33
CAPN1-223ENST00000533079 LAYNQ6UX15 382 aa13.01□□□□□ -0.33
CAPN1-223ENST00000533079 AHI1Q8N157 1196 aa13.01□□□□□ -0.33
CAPN1-223ENST00000533079 OXR1Q8N573 874 aa13.01□□□□□ -0.33
CAPN1-223ENST00000533079 C12orf29Q8N999 325 aa13.01□□□□□ -0.33
CAPN1-223ENST00000533079 GOLGA5Q8TBA6 731 aa13.01□□□□□ -0.33
CAPN1-223ENST00000533079 DDI1Q8WTU0 396 aa13.01□□□□□ -0.33
CAPN1-223ENST00000533079 FGF11Q92914 225 aa13.01□□□□□ -0.33
CAPN1-223ENST00000533079 PLD4Q96BZ4 506 aa13.01□□□□□ -0.33
CAPN1-223ENST00000533079 TMEM176AQ96HP8 235 aa13.01□□□□□ -0.33
CAPN1-223ENST00000533079 ORAI3Q9BRQ5 295 aa13.01□□□□□ -0.33
CAPN1-223ENST00000533079 TFIP11Q9UBB9 837 aaKnown RBP13.01□□□□□ -0.33
CAPN1-223ENST00000533079 HMGXB4Q9UGU5 601 aa13.01□□□□□ -0.33
CAPN1-223ENST00000533079 RASAL2Q9UJF2 1139 aa13.01□□□□□ -0.33
CAPN1-223ENST00000533079 USP3Q9Y6I4 520 aa13.01□□□□□ -0.33
CAPN1-223ENST00000533079 SHROOM3Q8TF72 1996 aa13□□□□□ -0.33
CAPN1-223ENST00000533079 A0A1W2PPC4 97 aa13□□□□□ -0.33
CAPN1-223ENST00000533079 LRRIQ3A6PVS8 624 aaPredicted RBP13□□□□□ -0.33
CAPN1-223ENST00000533079 CLIC2O15247 247 aa13□□□□□ -0.33
CAPN1-223ENST00000533079 EXOC3O60645 756 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms