RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 CHKBQ9Y259 395 aa11.96□□□□□ -0.5
USP35-207ENST00000530546 ACTL7BQ9Y614 415 aa11.96□□□□□ -0.5
USP35-207ENST00000530546 APOL1O14791 398 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 TAC1P20366 129 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 IL4RP24394 825 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 AFF1P51825 1210 aaKnown RBP11.95□□□□□ -0.5
USP35-207ENST00000530546 LILRA4P59901 499 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 IL9RQ01113 521 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 SLC34A1Q06495 639 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 AP1B1Q10567 949 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 LSAMPQ13449 338 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 BOLA3Q53S33 107 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 ARHGAP17Q68EM7 881 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 LRRC74BQ6ZQY2 392 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 C4orf50Q6ZRC1 276 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 RNF169Q8NCN4 708 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 FBXO36Q8NEA4 188 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 USP6NLQ92738 828 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 LPPQ93052 612 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 APBA2Q99767 749 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 KATNAL1Q9BW62 490 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 FRMD8P1Q9BZ68 369 aaPredicted RBP11.95□□□□□ -0.5
USP35-207ENST00000530546 TIMM13Q9Y5L4 95 aaPredicted RBP11.95□□□□□ -0.5
USP35-207ENST00000530546 CDY2AQ9Y6F7 541 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 TCEA3O75764 348 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 ENDOD1O94919 500 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 ABHD2P08910 425 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 CCDC166P0CW27 439 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 GCAP28676 217 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 RBL1P28749 1068 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 CTGFP29279 349 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 SCNN1BP51168 640 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 GPX6P59796 221 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 PKN2Q16513 984 aaKnown RBP11.95□□□□□ -0.5
USP35-207ENST00000530546 SV2CQ496J9 727 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 WSCD1Q658N2 575 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 SMYD5Q6GMV2 418 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 IFNL1Q8IU54 200 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 PALM2Q8IXS6 379 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 C4orf33Q8N1A6 199 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 PQLC3Q8N755 202 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 NETO2Q8NC67 525 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 TRPV1Q8NER1 839 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 OLFM3Q96PB7 478 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 MED10Q9BTT4 135 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 SAR1AQ9NR31 198 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 DDX43Q9NXZ2 648 aaKnown RBP11.95□□□□□ -0.5
USP35-207ENST00000530546 CHMP2BQ9UQN3 213 aa11.95□□□□□ -0.5
USP35-207ENST00000530546 DPYSL4O14531 572 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 CYB561D2O14569 222 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 PTGESO14684 152 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 HGSO14964 777 aaPredicted RBP11.94□□□□□ -0.5
USP35-207ENST00000530546 T-ENOLP0DO92 83 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 KCNE1P15382 129 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 SNX16P57768 344 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 CRHR2Q13324 411 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 PCBP1Q15365 356 aaKnown RBP eCLIP11.94□□□□□ -0.5
USP35-207ENST00000530546 CCNJLQ8IV13 435 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 CRYBG2Q8N1P7 616 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 SMC1BQ8NDV3 1235 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 FAF2Q96CS3 445 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 FAM124BQ9H5Z6 455 aaPredicted RBP11.94□□□□□ -0.5
USP35-207ENST00000530546 PREBQ9HCU5 417 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 RAB6BQ9NRW1 208 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 LGALS13Q9UHV8 139 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 CLUHO75153 1309 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 F5H423 210 aaPredicted RBP11.94□□□□□ -0.5
USP35-207ENST00000530546 M0QZ92 97 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 MAP3K7O43318 606 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 AVILO75366 819 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 ZBED1O96006 694 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 AKR1A1P14550 325 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 MLH1P40692 756 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 ADIGQ0VDE8 80 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 PDK2Q15119 407 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 C3orf62Q6ZUJ4 267 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 PIGZQ86VD9 579 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 FAM131BQ86XD5 332 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 CCDC185Q8N715 623 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 B3GALNT2Q8NCR0 500 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 MAML1Q92585 1016 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 WNT8BQ93098 351 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 GAD1Q99259 594 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 TBCBQ99426 244 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 ZNF184Q99676 751 aaPredicted RBP11.94□□□□□ -0.5
USP35-207ENST00000530546 ARHGAP39Q9C0H5 1083 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 OCEL1Q9H607 264 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 ZNF212Q9UDV6 495 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 ZNF510Q9Y2H8 683 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 NR2E3Q9Y5X4 410 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 BEST1O76090 585 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 CYP2F1P24903 491 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 PNPLA4P41247 253 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 RCN1Q15293 331 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 KHDC1Q4VXA5 237 aaKnown RBP11.94□□□□□ -0.5
USP35-207ENST00000530546 RGMBQ6NW40 437 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 RGS9BPQ6ZS82 235 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 MYLK4Q86YV6 388 aaPredicted RBP11.94□□□□□ -0.5
USP35-207ENST00000530546 PDIK1LQ8N165 341 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 PYROXD2Q8N2H3 581 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms