RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 PSMC1P62191 440 aaKnown RBP5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 VAMP2P63027 116 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 NSUN2Q08J23 767 aaKnown RBP eCLIP5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 FOXD4Q12950 439 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 UBXN2BQ14CS0 331 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 MGAT5BQ3V5L5 792 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 DCAF12L1Q5VU92 463 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 FAM83AQ86UY5 434 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 TTC30AQ86WT1 665 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 GAS2L3Q86XJ1 694 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 ZDHHC14Q8IZN3 488 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 DCLK2Q8N568 766 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 GLIS1Q8NBF1 620 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 DNERQ8NFT8 737 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 FBXO18Q8NFZ0 1043 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 OR56A3Q8NH54 315 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 SPATA18Q8TC71 538 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 OTUD7AQ8TE49 926 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 RPL10LQ96L21 214 aaKnown RBP5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 PRPF18Q99633 342 aaKnown RBP5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 SLC26A6Q9BXS9 759 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 NELFAQ9H3P2 528 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 JMJD4Q9H9V9 463 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 ITM2CQ9NQX7 267 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 TMOD2Q9NZR1 351 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 MID2Q9UJV3 735 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 MTUS1Q9ULD2 1270 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 SHOC2Q9UQ13 582 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 CRYL1Q9Y2S2 319 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 OAS3Q9Y6K5 1087 aaKnown RBP5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 SPEF2Q9C093 1822 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 NBEAQ8NFP9 2946 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 UTYO14607 1347 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 A0A0G2JLL6 359 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 ZNF503-AS2A6NEH8 195 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 PRR5-ARHGAP8B1AHC4 643 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 M0QYG6 137 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 TRIM38O00635 465 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 HOXA3O43365 443 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 MBD4O95243 580 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 NDST3O95803 873 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 PDGFBP01127 241 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 PYGLP06737 847 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 PROS1P07225 676 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 SBK3P0C264 359 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 ATXN1LP0C7T5 689 aaKnown RBP5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 NPPBP16860 134 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 CST5P28325 142 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 LRPAP1P30533 357 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 SLC5A2P31639 672 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 PHKA1P46020 1223 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 EPHB3P54753 998 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 DLG4P78352 724 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 IQCB1Q15051 598 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 SF3B3Q15393 1217 aaKnown RBP5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 BMT2Q1RMZ1 405 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 SLC5A9Q2M3M2 681 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 HSP90AB3PQ58FF7 597 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 METTL24Q5JXM2 366 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 ATXN7L2Q5T6C5 722 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 UTP14CQ5TAP6 766 aaKnown RBP5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 FAXCQ5TGI0 409 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 MZT2BQ6NZ67 158 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 C4orf50Q6ZRC1 276 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 PRRT2Q7Z6L0 340 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 PLEKHH3Q7Z736 793 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 LRRTM4Q86VH4 590 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 NRSN1Q8IZ57 195 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 OR14K1Q8NGZ2 314 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 THAP4Q8WY91 577 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 HDAC2Q92769 488 aaKnown RBP5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 KCNN1Q92952 543 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 CEP95Q96GE4 821 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 LIN37Q96GY3 246 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 EIF2AK1Q9BQI3 630 aaKnown RBP5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 KRTAP4-8Q9BYQ9 185 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 AGTPBP1Q9UPW5 1226 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 ZDHHC9Q9Y397 364 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 NEU2Q9Y3R4 380 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 ZHX2Q9Y6X8 837 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 PTPRFP10586 1907 aa5.28□□□□□ -1.56
HMGB1P23-201ENST00000518743 C2CD3Q4AC94 2353 aa5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 A0A1W2PRX2 142 aa5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 PRSS29PA6NIE9 313 aa5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 KIF28PB7ZC32 967 aa5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 IPO5O00410 1097 aaKnown RBP5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 PIP5K1BO14986 540 aa5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 CCNT2O60583 730 aaKnown RBP5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 LPXNO60711 386 aa5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 FAM155BO75949 473 aa5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 ZNF888P0CJ79 500 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 GNAT2P19087 354 aa5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 KCNJ4P48050 445 aa5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 ALDH18A1P54886 795 aaKnown RBP5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 NAP1L1P55209 391 aaKnown RBP5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 RAC3P60763 192 aa5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 TAP1Q03518 808 aa5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 TRPC3Q13507 836 aa5.27□□□□□ -1.57
HMGB1P23-201ENST00000518743 RRAGBQ5VZM2 374 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms