RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 MFAP3LO75121 409 aa11.51□□□□□ -0.57
CPSF7-212ENST00000489728 RTN2O75298 545 aa11.51□□□□□ -0.57
CPSF7-212ENST00000489728 GRAP2O75791 330 aa11.51□□□□□ -0.57
CPSF7-212ENST00000489728 CHRNB1P11230 501 aa11.51□□□□□ -0.57
CPSF7-212ENST00000489728 KRT3P12035 628 aa11.51□□□□□ -0.57
CPSF7-212ENST00000489728 DESP17661 470 aa11.51□□□□□ -0.57
CPSF7-212ENST00000489728 ABCB4P21439 1286 aa11.51□□□□□ -0.57
CPSF7-212ENST00000489728 CD72P21854 359 aa11.51□□□□□ -0.57
CPSF7-212ENST00000489728 OPRD1P41143 372 aa11.51□□□□□ -0.57
CPSF7-212ENST00000489728 PTPN9P43378 593 aa11.51□□□□□ -0.57
CPSF7-212ENST00000489728 VCPP55072 806 aaKnown RBP11.51□□□□□ -0.57
CPSF7-212ENST00000489728 TBX2Q13207 712 aaPredicted RBP11.51□□□□□ -0.57
CPSF7-212ENST00000489728 FZD5Q13467 585 aa11.51□□□□□ -0.57
CPSF7-212ENST00000489728 PON2Q15165 354 aa11.51□□□□□ -0.57
CPSF7-212ENST00000489728 E2F5Q15329 346 aa11.51□□□□□ -0.57
CPSF7-212ENST00000489728 ANO4Q32M45 955 aa11.51□□□□□ -0.57
CPSF7-212ENST00000489728 MPPE1Q53F39 396 aa11.51□□□□□ -0.57
CPSF7-212ENST00000489728 RNF43Q68DV7 783 aa11.51□□□□□ -0.57
CPSF7-212ENST00000489728 DNAJC24Q6P3W2 148 aa11.51□□□□□ -0.57
CPSF7-212ENST00000489728 SND1Q7KZF4 910 aaKnown RBP eCLIP11.51□□□□□ -0.57
CPSF7-212ENST00000489728 TTC8Q8TAM2 541 aa11.51□□□□□ -0.57
CPSF7-212ENST00000489728 KCNV2Q8TDN2 545 aa11.51□□□□□ -0.57
CPSF7-212ENST00000489728 CPLX3Q8WVH0 158 aa11.51□□□□□ -0.57
CPSF7-212ENST00000489728 PNKPQ96T60 521 aa11.51□□□□□ -0.57
CPSF7-212ENST00000489728 SELENOOQ9BVL4 669 aa11.51□□□□□ -0.57
CPSF7-212ENST00000489728 ISCUQ9H1K1 167 aa11.51□□□□□ -0.57
CPSF7-212ENST00000489728 METTL5Q9NRN9 209 aaKnown RBP11.51□□□□□ -0.57
CPSF7-212ENST00000489728 ABHD10Q9NUJ1 306 aa11.51□□□□□ -0.57
CPSF7-212ENST00000489728 PARVAQ9NVD7 372 aa11.51□□□□□ -0.57
CPSF7-212ENST00000489728 DEC1Q9P2X7 70 aa11.51□□□□□ -0.57
CPSF7-212ENST00000489728 NDRG2Q9UN36 371 aaKnown RBP11.51□□□□□ -0.57
CPSF7-212ENST00000489728 HCN4Q9Y3Q4 1203 aa11.51□□□□□ -0.57
CPSF7-212ENST00000489728 TYW5A2RUC4 315 aaKnown RBP11.5□□□□□ -0.57
CPSF7-212ENST00000489728 C2CD4BA6NLJ0 364 aa11.5□□□□□ -0.57
CPSF7-212ENST00000489728 KCNU1A8MYU2 1149 aa11.5□□□□□ -0.57
CPSF7-212ENST00000489728 AKR1B15C9JRZ8 316 aaPredicted RBP11.5□□□□□ -0.57
CPSF7-212ENST00000489728 NEDD8-MDP1E9PL57 170 aa11.5□□□□□ -0.57
CPSF7-212ENST00000489728 M0QYT0 321 aa11.5□□□□□ -0.57
CPSF7-212ENST00000489728 SCAMP3O14828 347 aaKnown RBP11.5□□□□□ -0.57
CPSF7-212ENST00000489728 AP5Z1O43299 807 aa11.5□□□□□ -0.57
CPSF7-212ENST00000489728 GALR2O43603 387 aaPredicted RBP11.5□□□□□ -0.57
CPSF7-212ENST00000489728 PI15O43692 258 aa11.5□□□□□ -0.57
CPSF7-212ENST00000489728 ATG13O75143 517 aa11.5□□□□□ -0.57
CPSF7-212ENST00000489728 ENDOD1O94919 500 aa11.5□□□□□ -0.57
CPSF7-212ENST00000489728 APODP05090 189 aa11.5□□□□□ -0.57
CPSF7-212ENST00000489728 TYRP14679 529 aa11.5□□□□□ -0.57
CPSF7-212ENST00000489728 SDC4P31431 198 aa11.5□□□□□ -0.57
CPSF7-212ENST00000489728 RDXP35241 583 aaKnown RBP11.5□□□□□ -0.57
CPSF7-212ENST00000489728 FLT3P36888 993 aa11.5□□□□□ -0.57
CPSF7-212ENST00000489728 GRIA2P42262 883 aa11.5□□□□□ -0.57
CPSF7-212ENST00000489728 TNFRSF4P43489 277 aa11.5□□□□□ -0.57
CPSF7-212ENST00000489728 CXCR3P49682 368 aa11.5□□□□□ -0.57
CPSF7-212ENST00000489728 SULT1E1P49888 294 aa11.5□□□□□ -0.57
CPSF7-212ENST00000489728 GALK1P51570 392 aa11.5□□□□□ -0.57
CPSF7-212ENST00000489728 ZNF75DP51815 510 aa11.5□□□□□ -0.57
CPSF7-212ENST00000489728 MAPK8IP2Q13387 824 aaPredicted RBP11.5□□□□□ -0.57
CPSF7-212ENST00000489728 HSF5Q4G112 596 aaPredicted RBP11.5□□□□□ -0.57
CPSF7-212ENST00000489728 FAM133BQ5BKY9 247 aaKnown RBP11.5□□□□□ -0.57
CPSF7-212ENST00000489728 PPP1R15BQ5SWA1 713 aa11.5□□□□□ -0.57
CPSF7-212ENST00000489728 TTC39BQ5VTQ0 682 aaPredicted RBP11.5□□□□□ -0.57
CPSF7-212ENST00000489728 OTUD1Q5VV17 481 aaPredicted RBP11.5□□□□□ -0.57
CPSF7-212ENST00000489728 FYB2Q5VWT5 728 aa11.5□□□□□ -0.57
CPSF7-212ENST00000489728 FSTL4Q6MZW2 842 aa11.5□□□□□ -0.57
CPSF7-212ENST00000489728 STRADAQ7RTN6 431 aa11.5□□□□□ -0.57
CPSF7-212ENST00000489728 PHTF2Q8N3S3 785 aa11.5□□□□□ -0.57
CPSF7-212ENST00000489728 DTWD2Q8NBA8 298 aa11.5□□□□□ -0.57
CPSF7-212ENST00000489728 ADAM32Q8TC27 787 aa11.5□□□□□ -0.57
CPSF7-212ENST00000489728 IRF2BPLQ9H1B7 796 aa11.5□□□□□ -0.57
CPSF7-212ENST00000489728 ARHGAP20Q9P2F6 1191 aa11.5□□□□□ -0.57
CPSF7-212ENST00000489728 FBXO10Q9UK96 956 aa11.5□□□□□ -0.57
CPSF7-212ENST00000489728 SLC27A6Q9Y2P4 619 aa11.5□□□□□ -0.57
CPSF7-212ENST00000489728 MTF2Q9Y483 593 aaPredicted RBP11.5□□□□□ -0.57
CPSF7-212ENST00000489728 SCINQ9Y6U3 715 aa11.5□□□□□ -0.57
CPSF7-212ENST00000489728 CHURC1-FNTBB4DL54 471 aa11.49□□□□□ -0.57
CPSF7-212ENST00000489728 TULP3O75386 442 aa11.49□□□□□ -0.57
CPSF7-212ENST00000489728 KAT7O95251 611 aa11.49□□□□□ -0.57
CPSF7-212ENST00000489728 PAPSS2O95340 614 aaPredicted RBP11.49□□□□□ -0.57
CPSF7-212ENST00000489728 FTLP02792 175 aaPredicted RBP11.49□□□□□ -0.57
CPSF7-212ENST00000489728 DCNP07585 359 aaKnown RBP11.49□□□□□ -0.57
CPSF7-212ENST00000489728 SKILP12757 684 aa11.49□□□□□ -0.57
CPSF7-212ENST00000489728 PDGFRAP16234 1089 aa11.49□□□□□ -0.57
CPSF7-212ENST00000489728 CDC25BP30305 580 aa11.49□□□□□ -0.57
CPSF7-212ENST00000489728 ZNF143P52747 638 aaPredicted RBP11.49□□□□□ -0.57
CPSF7-212ENST00000489728 RNASE9P60153 205 aaKnown RBP11.49□□□□□ -0.57
CPSF7-212ENST00000489728 PITX1P78337 314 aaPredicted RBP11.49□□□□□ -0.57
CPSF7-212ENST00000489728 DEUP1Q05D60 604 aa11.49□□□□□ -0.57
CPSF7-212ENST00000489728 NME3Q13232 169 aa11.49□□□□□ -0.57
CPSF7-212ENST00000489728 C2CD6Q53TS8 623 aa11.49□□□□□ -0.57
CPSF7-212ENST00000489728 ZC3H12AQ5D1E8 599 aaKnown RBP11.49□□□□□ -0.57
CPSF7-212ENST00000489728 PIK3R6Q5UE93 754 aa11.49□□□□□ -0.57
CPSF7-212ENST00000489728 GRAMD4Q6IC98 578 aa11.49□□□□□ -0.57
CPSF7-212ENST00000489728 PLEKHA7Q6IQ23 1121 aa11.49□□□□□ -0.57
CPSF7-212ENST00000489728 TPGS1Q6ZTW0 290 aa11.49□□□□□ -0.57
CPSF7-212ENST00000489728 TMC6Q7Z403 805 aa11.49□□□□□ -0.57
CPSF7-212ENST00000489728 SPEM1Q8N4L4 309 aa11.49□□□□□ -0.57
CPSF7-212ENST00000489728 TERB1Q8NA31 727 aa11.49□□□□□ -0.57
CPSF7-212ENST00000489728 HJURPQ8NCD3 748 aaPredicted RBP11.49□□□□□ -0.57
CPSF7-212ENST00000489728 FNIP1Q8TF40 1166 aa11.49□□□□□ -0.57
CPSF7-212ENST00000489728 CENPIQ92674 756 aaPredicted RBP11.49□□□□□ -0.57
CPSF7-212ENST00000489728 RNF34Q969K3 372 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms