RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 STARD7Q9NQZ5 370 aa3.86□□□□□ -1.79
NF1-213ENST00000489712 FAM50BQ9Y247 325 aa3.86□□□□□ -1.79
NF1-213ENST00000489712 ZNF335Q9H4Z2 1342 aaPredicted RBP3.86□□□□□ -1.79
NF1-213ENST00000489712 CCDC187A0A096LP49 1063 aa3.85□□□□□ -1.79
NF1-213ENST00000489712 OR2W5A6NFC9 320 aa3.85□□□□□ -1.79
NF1-213ENST00000489712 TLX3O43711 291 aaPredicted RBP3.85□□□□□ -1.79
NF1-213ENST00000489712 CBSLP0DN79 551 aa3.85□□□□□ -1.79
NF1-213ENST00000489712 EGR1P18146 543 aa3.85□□□□□ -1.79
NF1-213ENST00000489712 CBSP35520 551 aa3.85□□□□□ -1.79
NF1-213ENST00000489712 ALDH7A1P49419 539 aaKnown RBP3.85□□□□□ -1.79
NF1-213ENST00000489712 PRIM2P49643 509 aa3.85□□□□□ -1.79
NF1-213ENST00000489712 HTR6P50406 440 aa3.85□□□□□ -1.79
NF1-213ENST00000489712 SEMA3BQ13214 749 aa3.85□□□□□ -1.79
NF1-213ENST00000489712 GAB1Q13480 694 aa3.85□□□□□ -1.79
NF1-213ENST00000489712 CBFBQ13951 182 aa3.85□□□□□ -1.79
NF1-213ENST00000489712 ELF2Q15723 593 aa3.85□□□□□ -1.79
NF1-213ENST00000489712 P3H1Q32P28 736 aa3.85□□□□□ -1.79
NF1-213ENST00000489712 KIAA0408Q6ZU52 694 aa3.85□□□□□ -1.79
NF1-213ENST00000489712 RFX6Q8HWS3 928 aa3.85□□□□□ -1.79
NF1-213ENST00000489712 ADGRF4Q8IZF3 695 aa3.85□□□□□ -1.79
NF1-213ENST00000489712 SLC44A5Q8NCS7 719 aa3.85□□□□□ -1.79
NF1-213ENST00000489712 CELF1Q92879 486 aaKnown RBP3.85□□□□□ -1.79
NF1-213ENST00000489712 ZNF845Q96IR2 970 aaPredicted RBP3.85□□□□□ -1.79
NF1-213ENST00000489712 NUDT22Q9BRQ3 303 aa3.85□□□□□ -1.79
NF1-213ENST00000489712 CDCP1Q9H5V8 836 aa3.85□□□□□ -1.79
NF1-213ENST00000489712 MOV10Q9HCE1 1003 aaKnown RBP3.85□□□□□ -1.79
NF1-213ENST00000489712 TMEM8AQ9HCN3 771 aa3.85□□□□□ -1.79
NF1-213ENST00000489712 DECR2Q9NUI1 292 aa3.85□□□□□ -1.79
NF1-213ENST00000489712 ZNF580Q9UK33 172 aa3.85□□□□□ -1.79
NF1-213ENST00000489712 ZMYND8Q9ULU4 1186 aaPredicted RBP3.85□□□□□ -1.79
NF1-213ENST00000489712 SPATA31A5Q5VU36 1347 aa3.85□□□□□ -1.79
NF1-213ENST00000489712 EMSYQ7Z589 1322 aa3.85□□□□□ -1.79
NF1-213ENST00000489712 SPATA31A7Q8IWB4 1347 aa3.85□□□□□ -1.79
NF1-213ENST00000489712 CTIFO43310 598 aaKnown RBP3.84□□□□□ -1.79
NF1-213ENST00000489712 NDST3O95803 873 aa3.84□□□□□ -1.79
NF1-213ENST00000489712 ALADP13716 330 aa3.84□□□□□ -1.79
NF1-213ENST00000489712 SLC5A1P13866 664 aa3.84□□□□□ -1.79
NF1-213ENST00000489712 PECAM1P16284 738 aaPredicted RBP3.84□□□□□ -1.79
NF1-213ENST00000489712 TNFRSF1BP20333 461 aa3.84□□□□□ -1.79
NF1-213ENST00000489712 GABRB3P28472 473 aa3.84□□□□□ -1.79
NF1-213ENST00000489712 CCKARP32238 428 aa3.84□□□□□ -1.79
NF1-213ENST00000489712 CCKBRP32239 447 aa3.84□□□□□ -1.79
NF1-213ENST00000489712 SOX2P48431 317 aa3.84□□□□□ -1.79
NF1-213ENST00000489712 THBS3P49746 956 aa3.84□□□□□ -1.79
NF1-213ENST00000489712 NSUN2Q08J23 767 aaKnown RBP eCLIP3.84□□□□□ -1.79
NF1-213ENST00000489712 PRTGQ2VWP7 1150 aa3.84□□□□□ -1.79
NF1-213ENST00000489712 MIDNQ504T8 468 aa3.84□□□□□ -1.79
NF1-213ENST00000489712 MANEAQ5SRI9 462 aa3.84□□□□□ -1.79
NF1-213ENST00000489712 RUSC1-AS1Q66K80 236 aa3.84□□□□□ -1.79
NF1-213ENST00000489712 RAP1GAP2Q684P5 730 aa3.84□□□□□ -1.79
NF1-213ENST00000489712 ACSM6Q6P461 480 aa3.84□□□□□ -1.79
NF1-213ENST00000489712 KYAT3Q6YP21 454 aaKnown RBP3.84□□□□□ -1.79
NF1-213ENST00000489712 KRT27Q7Z3Y8 459 aa3.84□□□□□ -1.79
NF1-213ENST00000489712 ZFPM2Q8WW38 1151 aa3.84□□□□□ -1.79
NF1-213ENST00000489712 GLMPQ8WWB7 406 aa3.84□□□□□ -1.79
NF1-213ENST00000489712 ASB12Q8WXK4 309 aa3.84□□□□□ -1.79
NF1-213ENST00000489712 GJA10Q969M2 543 aa3.84□□□□□ -1.79
NF1-213ENST00000489712 LYZL4Q96KX0 146 aa3.84□□□□□ -1.79
NF1-213ENST00000489712 HTATIP2Q9BUP3 242 aa3.84□□□□□ -1.79
NF1-213ENST00000489712 SARGQ9BW04 601 aa3.84□□□□□ -1.79
NF1-213ENST00000489712 GATA5Q9BWX5 397 aaPredicted RBP3.84□□□□□ -1.79
NF1-213ENST00000489712 FBXO28Q9NVF7 368 aa3.84□□□□□ -1.79
NF1-213ENST00000489712 MSRB1Q9NZV6 116 aa3.84□□□□□ -1.79
NF1-213ENST00000489712 IPO11Q9UI26 975 aaKnown RBP3.84□□□□□ -1.79
NF1-213ENST00000489712 AGO2Q9UKV8 859 aaKnown RBP3.84□□□□□ -1.79
NF1-213ENST00000489712 UBE2J1Q9Y385 318 aaPredicted RBP3.84□□□□□ -1.79
NF1-213ENST00000489712 CACNA1IQ9P0X4 2223 aa3.84□□□□□ -1.79
NF1-213ENST00000489712 UGDHO60701 494 aa3.83□□□□□ -1.8
NF1-213ENST00000489712 ZC3H11AO75152 810 aaKnown RBP eCLIP3.83□□□□□ -1.8
NF1-213ENST00000489712 ALPLP05186 524 aa3.83□□□□□ -1.8
NF1-213ENST00000489712 ENO1P06733 434 aaKnown RBP3.83□□□□□ -1.8
NF1-213ENST00000489712 AKR1A1P14550 325 aa3.83□□□□□ -1.8
NF1-213ENST00000489712 STAT6P42226 847 aa3.83□□□□□ -1.8
NF1-213ENST00000489712 ZNF84P51523 738 aa3.83□□□□□ -1.8
NF1-213ENST00000489712 DMWDQ09019 674 aa3.83□□□□□ -1.8
NF1-213ENST00000489712 PMS2P11Q13670 270 aa3.83□□□□□ -1.8
NF1-213ENST00000489712 SEMA3AQ14563 771 aa3.83□□□□□ -1.8
NF1-213ENST00000489712 DLGAP5Q15398 846 aa3.83□□□□□ -1.8
NF1-213ENST00000489712 SAFBQ15424 915 aaKnown RBP eCLIP3.83□□□□□ -1.8
NF1-213ENST00000489712 INPP5JQ15735 1006 aaPredicted RBP3.83□□□□□ -1.8
NF1-213ENST00000489712 ANXA2RQ3ZCQ2 193 aa3.83□□□□□ -1.8
NF1-213ENST00000489712 ARHGAP15Q53QZ3 475 aa3.83□□□□□ -1.8
NF1-213ENST00000489712 COBLL1Q53SF7 1204 aa3.83□□□□□ -1.8
NF1-213ENST00000489712 KIAA1161Q6NSJ0 714 aa3.83□□□□□ -1.8
NF1-213ENST00000489712 ZNF549Q6P9A3 640 aa3.83□□□□□ -1.8
NF1-213ENST00000489712 DHRS13Q6UX07 377 aa3.83□□□□□ -1.8
NF1-213ENST00000489712 PIK3AP1Q6ZUJ8 805 aa3.83□□□□□ -1.8
NF1-213ENST00000489712 RFX8Q6ZV50 586 aa3.83□□□□□ -1.8
NF1-213ENST00000489712 TRAPPC11Q7Z392 1133 aa3.83□□□□□ -1.8
NF1-213ENST00000489712 TTC30AQ86WT1 665 aa3.83□□□□□ -1.8
NF1-213ENST00000489712 LAS2Q8IYD9 372 aa3.83□□□□□ -1.8
NF1-213ENST00000489712 TXLNBQ8N3L3 684 aa3.83□□□□□ -1.8
NF1-213ENST00000489712 SLC25A28Q96A46 364 aa3.83□□□□□ -1.8
NF1-213ENST00000489712 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.83□□□□□ -1.85e-7■■■■■ 27.6
NF1-213ENST00000489712 GJB4Q9NTQ9 266 aa3.83□□□□□ -1.8
NF1-213ENST00000489712 RGL1Q9NZL6 768 aa3.83□□□□□ -1.8
NF1-213ENST00000489712 COG5Q9UP83 839 aa3.83□□□□□ -1.8
NF1-213ENST00000489712 MAN2B2Q9Y2E5 1009 aa3.83□□□□□ -1.8
NF1-213ENST00000489712 TRBV5-3A0A0A0MS03 114 aa3.82□□□□□ -1.8
NF1-213ENST00000489712 FAM234BA2RU67 622 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms