RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 FKBP1BP68106 108 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 SLC39A12Q504Y0 691 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 B3GALNT2Q8NCR0 500 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 RNF208Q9H0X6 261 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 HMX1Q9NP08 348 aaPredicted RBP11.63□□□□□ -0.55
SMPD4-218ENST00000482171 SLCO1B3Q9NPD5 702 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 CACNG4Q9UBN1 327 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 DDX3YO15523 660 aaKnown RBP11.63□□□□□ -0.55
SMPD4-218ENST00000482171 TSPAN1O60635 241 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 MSCO60682 206 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 F9P00740 461 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 CHKAP35790 457 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 PEX5P50542 639 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 DRG2P55039 364 aaKnown RBP11.63□□□□□ -0.55
SMPD4-218ENST00000482171 CYLC2Q14093 348 aaPredicted RBP11.63□□□□□ -0.55
SMPD4-218ENST00000482171 SLC10A6Q3KNW5 377 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 CKAP2Q8WWK9 683 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 RMDN2Q96LZ7 410 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 DDX50Q9BQ39 737 aaKnown RBP11.63□□□□□ -0.55
SMPD4-218ENST00000482171 UNKQ9C0B0 810 aaKnown RBP11.63□□□□□ -0.55
SMPD4-218ENST00000482171 TASP1Q9H6P5 420 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 SMPD4Q9NXE4 827 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 ARMCX1Q9P291 453 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 PAIP2BQ9ULR5 123 aaKnown RBP11.63□□□□□ -0.55
SMPD4-218ENST00000482171 CORO1CQ9ULV4 474 aaPredicted RBP11.63□□□□□ -0.55
SMPD4-218ENST00000482171 IPPQ9Y573 584 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 RNF103-CHMP3A0A140T963 221 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 AIM2O14862 343 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 VNN1O95497 513 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 ERBB2P04626 1255 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 EEF1DP29692 281 aaKnown RBP11.63□□□□□ -0.55
SMPD4-218ENST00000482171 ALDH1A3P47895 512 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 INHBEP58166 350 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 SLC34A1Q06495 639 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 CHI3L2Q15782 390 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 WASHC2DQ5SRD0 308 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 LRRC74BQ6ZQY2 392 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 MFN1Q8IWA4 741 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 SCUBE1Q8IWY4 988 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 E2F7Q96AV8 911 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 DRC3Q9H069 523 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 ZCWPW1Q9H0M4 648 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 UPF3AQ9H1J1 476 aaKnown RBP11.63□□□□□ -0.55
SMPD4-218ENST00000482171 SIPA1L3O60292 1781 aaPredicted RBP11.62□□□□□ -0.55
SMPD4-218ENST00000482171 LTBP4Q8N2S1 1624 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 TMEM191CA6NGB0 347 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 E5RI56 91 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 APOC4-APOC2K7ER74 178 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 SEC24DO94855 1032 aaPredicted RBP11.62□□□□□ -0.55
SMPD4-218ENST00000482171 C22orf31O95567 290 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 APOC2P02655 101 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 LTFP02788 710 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 TAC1P20366 129 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 CCL23P55773 120 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 PKN2Q16513 984 aaKnown RBP11.62□□□□□ -0.55
SMPD4-218ENST00000482171 APLFQ8IW19 511 aaPredicted RBP11.62□□□□□ -0.55
SMPD4-218ENST00000482171 RASGEF1CQ8N431 466 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 ANKRD27Q96NW4 1050 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 FAM105AQ9NUU6 356 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 MYH11P35749 1972 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 TTLL13PA6NNM8 815 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 NT5C1B-RDH14C9J2C7 533 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 GOLGA8TH3BQL2 631 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 XPO1O14980 1071 aaKnown RBP11.62□□□□□ -0.55
SMPD4-218ENST00000482171 ENO3P13929 434 aaPredicted RBP11.62□□□□□ -0.55
SMPD4-218ENST00000482171 TCN1P20061 433 aaPredicted RBP11.62□□□□□ -0.55
SMPD4-218ENST00000482171 MMP13P45452 471 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 CRADDP78560 199 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 BFSP2Q13515 415 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 ANO4Q32M45 955 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 TMEM63BQ5T3F8 832 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 SEPT8Q92599 483 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 THAP11Q96EK4 314 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 LPIN3Q9BQK8 851 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 WARS2Q9UGM6 360 aaKnown RBP11.62□□□□□ -0.55
SMPD4-218ENST00000482171 AFF4Q9UHB7 1163 aaKnown RBP11.62□□□□□ -0.55
SMPD4-218ENST00000482171 LTBP3Q9NS15 1303 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 HARS2P49590 506 aaKnown RBP11.62□□□□□ -0.55
SMPD4-218ENST00000482171 ZNF143P52747 638 aaPredicted RBP11.62□□□□□ -0.55
SMPD4-218ENST00000482171 RABGGTBP53611 331 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 CRYBB1P53674 252 aaPredicted RBP11.62□□□□□ -0.55
SMPD4-218ENST00000482171 ARHGAP1Q07960 439 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 RASA2Q15283 850 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 DUPD1Q68J44 220 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 IRGCQ6NXR0 463 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 BLOC1S5Q8TDH9 187 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 SMARCD1Q96GM5 515 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 ELMO2Q96JJ3 720 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 TMEM120AQ9BXJ8 343 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 SHOC2Q9UQ13 582 aa11.62□□□□□ -0.55
SMPD4-218ENST00000482171 EDIL3O43854 480 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 FBXO21O94952 628 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 YBX3P16989 372 aaKnown RBP eCLIP11.61□□□□□ -0.556e-7■□□□□ 9.3
SMPD4-218ENST00000482171 NPR3P17342 541 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 AVPR1AP37288 418 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 ABCG1P45844 678 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 IL1RL1Q01638 556 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 MTFR1Q15390 333 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 TAF5Q15542 800 aa11.61□□□□□ -0.55
SMPD4-218ENST00000482171 NFE2Q16621 373 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms