RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 Q4G0T1 1027 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 SEZ6Q53EL9 994 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 ZCCHC8Q6NZY4 707 aaKnown RBP6.98□□□□□ -1.29
HDAC3-206ENST00000471968 TPH2Q8IWU9 490 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 OR2T34Q8NGX1 318 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 ETNPPLQ8TBG4 499 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 GPBAR1Q8TDU6 330 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 NUDT8Q8WV74 236 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 BSNDQ8WZ55 320 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 WBP2Q969T9 261 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 SLC45A3Q96JT2 553 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 PPP1R13BQ96KQ4 1090 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 EPAS1Q99814 870 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 CCDC3Q9BQI4 270 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 CIPCQ9C0C6 399 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 CYP4F12Q9HCS2 524 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 PLK2Q9NYY3 685 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 WDR35Q9P2L0 1181 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 COPG2Q9UBF2 871 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 SERGEFQ9UGK8 458 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 VAV3Q9UKW4 847 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 TNFSF13BQ9Y275 285 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 RPH3AQ9Y2J0 694 aaPredicted RBP6.98□□□□□ -1.29
HDAC3-206ENST00000471968 KCNMB2Q9Y691 235 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 NBEAL2Q6ZNJ1 2754 aa6.97□□□□□ -1.29
HDAC3-206ENST00000471968 TLN2Q9Y4G6 2542 aa6.97□□□□□ -1.29
HDAC3-206ENST00000471968 MEGF8Q7Z7M0 2845 aa6.97□□□□□ -1.29
HDAC3-206ENST00000471968 LRRTM2O43300 516 aa6.97□□□□□ -1.29
HDAC3-206ENST00000471968 KRT86O43790 486 aa6.97□□□□□ -1.29
HDAC3-206ENST00000471968 ITGB7P26010 798 aa6.97□□□□□ -1.29
HDAC3-206ENST00000471968 CCR5P51681 352 aa6.97□□□□□ -1.29
HDAC3-206ENST00000471968 RP1P56715 2156 aa6.97□□□□□ -1.29
HDAC3-206ENST00000471968 TSPY1Q01534 308 aa6.97□□□□□ -1.29
HDAC3-206ENST00000471968 ARID5AQ03989 594 aa6.97□□□□□ -1.29
HDAC3-206ENST00000471968 PPP2R5CQ13362 524 aa6.97□□□□□ -1.29
HDAC3-206ENST00000471968 NR0B2Q15466 257 aa6.97□□□□□ -1.29
HDAC3-206ENST00000471968 NFE2Q16621 373 aaPredicted RBP6.97□□□□□ -1.29
HDAC3-206ENST00000471968 BMT2Q1RMZ1 405 aa6.97□□□□□ -1.29
HDAC3-206ENST00000471968 SLC10A6Q3KNW5 377 aa6.97□□□□□ -1.29
HDAC3-206ENST00000471968 POM121L1PQ3SYA9 428 aa6.97□□□□□ -1.29
HDAC3-206ENST00000471968 WSCD1Q658N2 575 aa6.97□□□□□ -1.29
HDAC3-206ENST00000471968 C16orf46Q6P387 395 aa6.97□□□□□ -1.29
HDAC3-206ENST00000471968 CWC27Q6UX04 472 aaKnown RBP6.97□□□□□ -1.29
HDAC3-206ENST00000471968 IQCHQ86VS3 1027 aa6.97□□□□□ -1.29
HDAC3-206ENST00000471968 FANCBQ8NB91 859 aa6.97□□□□□ -1.29
HDAC3-206ENST00000471968 NCOA7Q8NI08 942 aa6.97□□□□□ -1.29
HDAC3-206ENST00000471968 C19orf60Q96EN9 201 aa6.97□□□□□ -1.29
HDAC3-206ENST00000471968 SMR3AQ99954 134 aa6.97□□□□□ -1.29
HDAC3-206ENST00000471968 TCHPQ9BT92 498 aa6.97□□□□□ -1.29
HDAC3-206ENST00000471968 INTS2Q9H0H0 1204 aaKnown RBP6.97□□□□□ -1.29
HDAC3-206ENST00000471968 KLHL11Q9NVR0 708 aa6.97□□□□□ -1.29
HDAC3-206ENST00000471968 FBXL12Q9NXK8 326 aa6.97□□□□□ -1.29
HDAC3-206ENST00000471968 NCKIPSDQ9NZQ3 722 aa6.97□□□□□ -1.29
HDAC3-206ENST00000471968 DSEQ9UL01 958 aa6.97□□□□□ -1.29
HDAC3-206ENST00000471968 NEU2Q9Y3R4 380 aa6.97□□□□□ -1.29
HDAC3-206ENST00000471968 PRRC2AP48634 2157 aaKnown RBP6.96□□□□□ -1.29
HDAC3-206ENST00000471968 A0A087WWV3 80 aa6.96□□□□□ -1.3
HDAC3-206ENST00000471968 A0A1W2PP55 124 aa6.96□□□□□ -1.3
HDAC3-206ENST00000471968 NTN3O00634 580 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-206ENST00000471968 CYB561D2O14569 222 aa6.96□□□□□ -1.3
HDAC3-206ENST00000471968 CAPN5O15484 640 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-206ENST00000471968 GUCY2CP25092 1073 aa6.96□□□□□ -1.3
HDAC3-206ENST00000471968 MCM5P33992 734 aa6.96□□□□□ -1.3
HDAC3-206ENST00000471968 RARRES1P49788 294 aa6.96□□□□□ -1.3
HDAC3-206ENST00000471968 MFAP3P55082 362 aa6.96□□□□□ -1.3
HDAC3-206ENST00000471968 NLRP5P59047 1200 aa6.96□□□□□ -1.3
HDAC3-206ENST00000471968 KCNMA1Q12791 1236 aa6.96□□□□□ -1.3
HDAC3-206ENST00000471968 OVGP1Q12889 678 aa6.96□□□□□ -1.3
HDAC3-206ENST00000471968 FOXD4Q12950 439 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-206ENST00000471968 STAT4Q14765 748 aa6.96□□□□□ -1.3
HDAC3-206ENST00000471968 EPHA7Q15375 998 aa6.96□□□□□ -1.3
HDAC3-206ENST00000471968 ZNF542PQ5EBM4 170 aa6.96□□□□□ -1.3
HDAC3-206ENST00000471968 TMEM164Q5U3C3 297 aa6.96□□□□□ -1.3
HDAC3-206ENST00000471968 MICU3Q86XE3 530 aa6.96□□□□□ -1.3
HDAC3-206ENST00000471968 CACNA2D3Q8IZS8 1091 aa6.96□□□□□ -1.3
HDAC3-206ENST00000471968 AHI1Q8N157 1196 aa6.96□□□□□ -1.3
HDAC3-206ENST00000471968 CHDHQ8NE62 594 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-206ENST00000471968 CENPTQ96BT3 561 aa6.96□□□□□ -1.3
HDAC3-206ENST00000471968 SLITRK1Q96PX8 696 aa6.96□□□□□ -1.3
HDAC3-206ENST00000471968 PYM1Q9BRP8 204 aaKnown RBP6.96□□□□□ -1.3
HDAC3-206ENST00000471968 TARS2Q9BW92 718 aaKnown RBP6.96□□□□□ -1.3
HDAC3-206ENST00000471968 ZMYND12Q9H0C1 365 aa6.96□□□□□ -1.3
HDAC3-206ENST00000471968 CDH19Q9H159 772 aa6.96□□□□□ -1.3
HDAC3-206ENST00000471968 NEUROG2Q9H2A3 272 aa6.96□□□□□ -1.3
HDAC3-206ENST00000471968 ABCB6Q9NP58 842 aa6.96□□□□□ -1.3
HDAC3-206ENST00000471968 SLAMF7Q9NQ25 335 aa6.96□□□□□ -1.3
HDAC3-206ENST00000471968 DLL4Q9NR61 685 aa6.96□□□□□ -1.3
HDAC3-206ENST00000471968 ELOVL2Q9NXB9 296 aa6.96□□□□□ -1.3
HDAC3-206ENST00000471968 MARK1Q9P0L2 795 aa6.96□□□□□ -1.3
HDAC3-206ENST00000471968 DAXXQ9UER7 740 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-206ENST00000471968 TLK1Q9UKI8 766 aa6.96□□□□□ -1.3
HDAC3-206ENST00000471968 UBQLN1Q9UMX0 589 aaKnown RBP6.96□□□□□ -1.3
HDAC3-206ENST00000471968 CA5BQ9Y2D0 317 aa6.96□□□□□ -1.3
HDAC3-206ENST00000471968 KCTD3Q9Y597 815 aa6.96□□□□□ -1.3
HDAC3-206ENST00000471968 TAF6LQ9Y6J9 622 aa6.96□□□□□ -1.3
HDAC3-206ENST00000471968 RNF212BA8MTL3 300 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 D6RAR5 112 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 COCHO43405 550 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 KCNAB3O43448 404 aa6.95□□□□□ -1.3
HDAC3-206ENST00000471968 PPP6R2O75170 966 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms