RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 PI4K2BG5E9Z4 385 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 NRG2O14511 850 aaPredicted RBP6.62□□□□□ -1.35
SF3B1-206ENST00000462613 ATMINO43313 823 aaPredicted RBP6.62□□□□□ -1.35
SF3B1-206ENST00000462613 NARSO43776 548 aaKnown RBP6.62□□□□□ -1.35
SF3B1-206ENST00000462613 PRPSAP2O60256 369 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 ACSL4O60488 711 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 IGLV3-27P01718 113 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 FYNP06241 537 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 TMEM253P0C7T8 217 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 ADH5P11766 374 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 CTHP32929 405 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 RFC1P35251 1148 aaPredicted RBP6.62□□□□□ -1.35
SF3B1-206ENST00000462613 FLT3P36888 993 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 EIF2DP41214 584 aaKnown RBP6.62□□□□□ -1.35
SF3B1-206ENST00000462613 SSR1P43307 286 aaKnown RBP6.62□□□□□ -1.35
SF3B1-206ENST00000462613 MAGEA1P43355 309 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 ZNF143P52747 638 aaPredicted RBP6.62□□□□□ -1.35
SF3B1-206ENST00000462613 GALCP54803 685 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 NAP1L1P55209 391 aaKnown RBP6.62□□□□□ -1.35
SF3B1-206ENST00000462613 GRSF1Q12849 480 aaKnown RBP eCLIP6.62□□□□□ -1.35
SF3B1-206ENST00000462613 PTP4A2Q12974 167 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 MAMLD1Q13495 774 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 LRRC32Q14392 662 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 DHCR24Q15392 516 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 TAF5Q15542 800 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 IFI16Q16666 785 aaKnown RBP6.62□□□□□ -1.35
SF3B1-206ENST00000462613 ODF2Q5BJF6 829 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 ZC3H12AQ5D1E8 599 aaKnown RBP6.62□□□□□ -1.35
SF3B1-206ENST00000462613 LY6G5CQ5SRR4 150 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 ZFYVE27Q5T4F4 411 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 TRIM68Q6AZZ1 485 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 PLEKHA7Q6IQ23 1121 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 SCYL2Q6P3W7 929 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 TRIM67Q6ZTA4 783 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 TPGS1Q6ZTW0 290 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 PHLDB2Q86SQ0 1253 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 SIX5Q8N196 739 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 HJURPQ8NCD3 748 aaPredicted RBP6.62□□□□□ -1.35
SF3B1-206ENST00000462613 ZNF564Q8TBZ8 553 aaPredicted RBP6.62□□□□□ -1.35
SF3B1-206ENST00000462613 FAM172AQ8WUF8 416 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 FAM3CQ92520 227 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 RSPRY1Q96DX4 576 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 TMA16Q96EY4 203 aaKnown RBP6.62□□□□□ -1.35
SF3B1-206ENST00000462613 CFAP57Q96MR6 1250 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 TBCBQ99426 244 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 CHP1Q99653 195 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 NUP85Q9BW27 656 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 TKTL2Q9H0I9 626 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 THAP2Q9H0W7 228 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 SPTLC3Q9NUV7 552 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 TAS2R14Q9NYV8 317 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 GTSE1Q9NYZ3 720 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 DEC1Q9P2X7 70 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 ANAPC7Q9UJX3 599 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 AGO1Q9UL18 857 aaKnown RBP6.62□□□□□ -1.35
SF3B1-206ENST00000462613 EPN1Q9Y6I3 576 aaPredicted RBP6.62□□□□□ -1.35
SF3B1-206ENST00000462613 NUP205Q92621 2012 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 SHROOM3Q8TF72 1996 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 TECTAO75443 2155 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 KANSL1LA0AUZ9 987 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 TMEM221A6NGB7 291 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 EIF3CLB5ME19 914 aaKnown RBP6.61□□□□□ -1.35
SF3B1-206ENST00000462613 NEDD8-MDP1E9PL57 170 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 M0R296 226 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 DLL1O00548 723 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 SCAMP3O14828 347 aaKnown RBP6.61□□□□□ -1.35
SF3B1-206ENST00000462613 ARHGAP6O43182 974 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 NDUFA10O95299 355 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 MOCS3O95396 460 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 IGLV3-25P01717 112 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 APODP05090 189 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 CYP17A1P05093 508 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 CYP1A2P05177 515 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 TYRP14679 529 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 ARSAP15289 507 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 DRD1P21728 446 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 GJA4P35212 333 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 MAGEA9P43362 315 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 NOP2P46087 812 aaKnown RBP6.61□□□□□ -1.35
SF3B1-206ENST00000462613 DGKGP49619 791 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 CXCR3P49682 368 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 OXCT1P55809 520 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 STARD6P59095 220 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 RPL7AP62424 266 aaKnown RBP6.61□□□□□ -1.35
SF3B1-206ENST00000462613 ZXDBP98169 803 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 TNK2Q07912 1038 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 CDH18Q13634 790 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 UBXN2BQ14CS0 331 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 HADHQ16836 314 aaKnown RBP6.61□□□□□ -1.35
SF3B1-206ENST00000462613 FBXO43Q4G163 708 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 EFHC2Q5JST6 749 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 DGKKQ5KSL6 1271 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 MPP7Q5T2T1 576 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 GRAMD4Q6IC98 578 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 POTEHQ6S545 545 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 Q6ZNB5 142 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 SLFN11Q7Z7L1 901 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 FAM131BQ86XD5 332 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 ADGRG2Q8IZP9 1017 aa6.61□□□□□ -1.35
SF3B1-206ENST00000462613 LGI2Q8N0V4 545 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms