RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 ARMC3Q5W041 872 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 PDPK2PQ6A1A2 396 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 ARCQ7LC44 396 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 ST13P4Q8IZP2 240 aaPredicted RBP12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 MTMR14Q8NCE2 650 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 TFB1MQ8WVM0 346 aaKnown RBP12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 NCSTNQ92542 709 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 CENPKQ9BS16 269 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 KLHL4Q9C0H6 718 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 RNPEPQ9H4A4 650 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 MINDY3Q9H8M7 445 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 APOBEC2Q9Y235 224 aaKnown RBP12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 POMPQ9Y244 141 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 BCLAF3A2AJT9 711 aaKnown RBP12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 FARP2O94887 1054 aaPredicted RBP12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 TCF7P36402 384 aaPredicted RBP12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 CDK18Q07002 472 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 CXCL9Q07325 125 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 STXBP2Q15833 593 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 CASC4Q6P4E1 433 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 PGM2L1Q6PCE3 622 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 AAGABQ6PD74 315 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 RAB3IL1Q8TBN0 382 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 MOCOSQ96EN8 888 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 PPP1R16BQ96T49 567 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 ACSS2Q9NR19 701 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 ZDHHC7Q9NXF8 308 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 INO80B-WBP1J3KQ70 363 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 PLIN3O60664 434 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 PFKMP08237 780 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 VCLP18206 1134 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 MAGEA6P43360 314 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 USP4Q13107 963 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 ACAP1Q15027 740 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 ATF7IP2Q5U623 682 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 SLC9A4Q6AI14 798 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 JADE1Q6IE81 842 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 MPZL3Q6UWV2 235 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 ADGRG6Q86SQ4 1221 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 B4GALNT2Q8NHY0 566 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 AGR3Q8TD06 166 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 EZH1Q92800 747 aaPredicted RBP12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 GCNAQ96QF7 691 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 CEP41Q9BYV8 373 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 INO80BQ9C086 356 aaPredicted RBP12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 XPNPEP3Q9NQH7 507 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 TSPAN16Q9UKR8 245 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 H3BNX3 289 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 ZNF195O14628 629 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 B4GALT4O60513 344 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 IQCF3P0C7M6 154 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 TGM2P21980 687 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 BSPRYQ5W0U4 402 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 CES3Q6UWW8 571 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 ARHGAP22Q7Z5H3 698 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 SESTD1Q86VW0 696 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 NMD3Q96D46 503 aaKnown RBP12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 CLMNQ96JQ2 1002 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 CDT1Q9H211 546 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 PTPRHQ9HD43 1115 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 CLIC5Q9NZA1 410 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 MOCS1Q9NZB8 636 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 TMEM216Q9P0N5 145 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 CAPN8A6NHC0 703 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 LACTBL1A8MY62 500 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 DCXO43602 365 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 ZBTB14O43829 449 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 PROZP22891 400 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 CYP2F1P24903 491 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 EFNA5P52803 228 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 TBL3Q12788 808 aaKnown RBP12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 PDK3Q15120 406 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 GRAMD1BQ3KR37 738 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 MMEL1Q495T6 779 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 PACS1Q6VY07 963 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 MCUQ8NE86 351 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 NAT14Q8WUY8 206 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 ATXN7L3BQ96GX2 97 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 TEX13BQ9BXU2 312 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 B3GNT5Q9BYG0 378 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 NRBP2Q9NSY0 501 aa12.09□□□□□ -0.47
PDZRN3-203ENST00000462146 SCN1AP35498 2009 aa12.08□□□□□ -0.47
PDZRN3-203ENST00000462146 MYOCOSA0A1B0GUC4 107 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 ZBTB42B2RXF5 422 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 E9PBE3 544 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 GPR25O00155 361 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 KLHL41O60662 606 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 NDST1P52848 882 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 SESN2P58004 480 aaPredicted RBP12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 BTKQ06187 659 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 DYNC1I2Q13409 638 aaKnown RBP12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 OLIG2Q13516 323 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 ITGA9Q13797 1035 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 LY6KQ17RY6 165 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 CMC1Q7Z7K0 106 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 ZBTB8OSQ8IWT0 167 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 SCUBE3Q8IX30 993 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 CXorf38Q8TB03 319 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 ACTRT2Q8TDY3 377 aa12.08□□□□□ -0.48
PDZRN3-203ENST00000462146 HAPLN3Q96S86 360 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms