RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 ENPEPQ07075 957 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 KCNJ12Q14500 433 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 EFTUD2Q15029 972 aaKnown RBP eCLIP8.1□□□□□ -1.112e-6■■■■■ 53.4
BRCC3-208ENST00000453705 SLC25A24Q6NUK1 477 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 PGBD2Q6P3X8 592 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 RBBP8NLQ8NC74 664 aaPredicted RBP8.1□□□□□ -1.11
BRCC3-208ENST00000453705 NEK11Q8NG66 645 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 DDI1Q8WTU0 396 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 SYN2Q92777 582 aaPredicted RBP8.1□□□□□ -1.11
BRCC3-208ENST00000453705 ITPAQ9BY32 194 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 TTYH3Q9C0H2 523 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 IGFLR1Q9H665 355 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 TAS2R3Q9NYW6 316 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 UBIAD1Q9Y5Z9 338 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 K7ESF4 209 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 EREGO14944 169 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 MSH4O15457 936 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 B3GALT2O43825 422 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 MFAP3LO75121 409 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 PEX11AO75192 247 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 DDNO94850 711 aaPredicted RBP8.09□□□□□ -1.11
BRCC3-208ENST00000453705 EGFRP00533 1210 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 TPBGLP0DKB5 382 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 SPATA31C1P0DKV0 1188 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 OSMP13725 252 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 RAG1P15918 1043 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 TNFRSF8P28908 595 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 TXKP42681 527 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 ALDH9A1P49189 494 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 METAP1P53582 386 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 CREB5Q02930 508 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 PTK2Q05397 1052 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 MPEG1Q2M385 716 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 FSCBQ5H9T9 825 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 E4F1Q66K89 784 aaPredicted RBP8.09□□□□□ -1.11
BRCC3-208ENST00000453705 KLHL6Q8WZ60 621 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 HSD17B14Q9BPX1 270 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 INTS2Q9H0H0 1204 aaKnown RBP8.09□□□□□ -1.11
BRCC3-208ENST00000453705 BLZF1Q9H2G9 400 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 ST6GALNAC4Q9H4F1 302 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 OLFML3Q9NRN5 406 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 HDAC6Q9UBN7 1215 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 LCMT1Q9UIC8 334 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 SALL4Q9UJQ4 1053 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 AGAP14A8MT82 685 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 A8MV72 311 aaPredicted RBP8.09□□□□□ -1.11
BRCC3-208ENST00000453705 EIF3DO15371 548 aaKnown RBP eCLIP8.09□□□□□ -1.11
BRCC3-208ENST00000453705 ZSCAN12O43309 604 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 HLA-DPA1P20036 260 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 CES1P23141 567 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 PPARGP37231 505 aaPredicted RBP8.09□□□□□ -1.11
BRCC3-208ENST00000453705 MLH1P40692 756 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 RGS2P41220 211 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 DSG1Q02413 1049 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 CAMK2DQ13557 499 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 EPHA7Q15375 998 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 KCTD21Q4G0X4 260 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 USP17L6PQ6QN14 398 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 LRRC55Q6ZSA7 311 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 REC114Q7Z4M0 266 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 LDHDQ86WU2 507 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 SLC9A9Q8IVB4 645 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 FAM216AQ8WUB2 273 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 WNK4Q96J92 1243 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 MRPL4Q9BYD3 311 aaKnown RBP8.09□□□□□ -1.11
BRCC3-208ENST00000453705 CARD8Q9Y2G2 431 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 GDAQ9Y2T3 454 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 PCDHB14Q9Y5E9 798 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 DOCK5Q9H7D0 1870 aa8.09□□□□□ -1.11
BRCC3-208ENST00000453705 LRRIQ4A6NIV6 560 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 PRR5-ARHGAP8B1AHC4 643 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 FAM86B1E9PN63 330 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 GIPC1O14908 333 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 RPS6KA5O75582 802 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 GLAP06280 429 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 FAM86B2P0C5J1 330 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 HSPA8P11142 646 aaKnown RBP8.08□□□□□ -1.12
BRCC3-208ENST00000453705 MYL4P12829 197 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 ADARP55265 1226 aaKnown RBP8.08□□□□□ -1.12
BRCC3-208ENST00000453705 ASIC1P78348 528 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 USP4Q13107 963 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 SNAPC2Q13487 334 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 DPYSQ14117 519 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 SV2CQ496J9 727 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 ANGEL2Q5VTE6 544 aaKnown RBP8.08□□□□□ -1.12
BRCC3-208ENST00000453705 WDR93Q6P2C0 686 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 SUSD1Q6UWL2 747 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 GLRX5Q86SX6 157 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 DPP9Q86TI2 863 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 PACS2Q86VP3 889 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 GATAD2AQ86YP4 633 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 TREML1Q86YW5 311 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 GRIN3AQ8TCU5 1115 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 ATP6V0BQ99437 205 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 L2HGDHQ9H9P8 463 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 DBR1Q9UK59 544 aaKnown RBP8.08□□□□□ -1.12
BRCC3-208ENST00000453705 MRFAP1Q9Y605 127 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 PFASO15067 1338 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 CCDC78A2IDD5 438 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 NVLO15381 856 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms