RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 TAF1DQ9H5J8 278 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 ELAC1Q9H777 363 aaKnown RBP4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 SNX15Q9NRS6 342 aa4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 DUSP22Q9NRW4 184 aa4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 DLL3Q9NYJ7 618 aa4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 PGAP2Q9UHJ9 254 aa4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 C19orf53Q9UNZ5 99 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 CNTN6Q9UQ52 1028 aa4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 CCDC141Q6ZP82 1450 aa4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 POLR2AP24928 1970 aaKnown RBP4.98□□□□□ -1.61
HMGB1P16-201ENST00000447155 KDM5AP29375 1690 aaKnown RBP4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 B8ZZF3 427 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 H0Y3Z8 333 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 AP4M1O00189 453 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 CES2O00748 559 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 PPP6R2O75170 966 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 LARGE1O95461 756 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 MYCLP12524 364 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 JUPP14923 745 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 MMP8P22894 467 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 CYP2C18P33260 490 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 MCM7P33993 719 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 SEMA3BQ13214 749 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 BFSP2Q13515 415 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 ANKRD45Q5TZF3 282 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 IGFL4Q6B9Z1 124 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 GRHL2Q6ISB3 625 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 CRIP3Q6Q6R5 217 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 ULK2Q8IYT8 1036 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 PNPLA1Q8N8W4 532 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 ABHD11Q8NFV4 315 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 SLC22A17Q8WUG5 538 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 CPT1BQ92523 772 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 C3orf49Q96BT1 292 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 UBXN10Q96LJ8 280 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 FSD1LQ9BXM9 530 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 KRTAP4-7Q9BYR0 210 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 BRD8Q9H0E9 1235 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 VPS16Q9H269 839 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 KCNK9Q9NPC2 374 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 FBXO28Q9NVF7 368 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 RRN3Q9NYV6 651 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 NDUFAF4Q9P032 175 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 MGAT4CQ9UBM8 478 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 ADAMTS5Q9UNA0 930 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 UBE2J1Q9Y385 318 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 LRRFIP2Q9Y608 721 aaKnown RBP4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 ARHGAP31Q2M1Z3 1444 aa4.97□□□□□ -1.61
HMGB1P16-201ENST00000447155 DENND4BO75064 1496 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 CFTRP13569 1480 aa4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 ANKRD30BQ9BXX2 1392 aa4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 PLEKHH1Q9ULM0 1364 aa4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 LINC00473A8K010 186 aa4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 KIF28PB7ZC32 967 aa4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 H0YIZ8 118 aa4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 GCOM1H8Y6P7 765 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 EIF3FO00303 357 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 QSOX1O00391 747 aa4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 MATN3O15232 486 aa4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 NPSP0C0P6 89 aa4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 EBLN1P0CF75 366 aa4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 ZNF37AP17032 561 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 ENGP17813 658 aa4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 AARSP49588 968 aaKnown RBP eCLIP4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 PRKAA2P54646 552 aa4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 ACTR2P61160 394 aa4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 TXNL4AP83876 142 aaKnown RBP4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 DEUP1Q05D60 604 aa4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 GABPB1Q06547 395 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 ABHD18Q0P651 414 aa4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 SF3A3Q12874 501 aaKnown RBP eCLIP4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 FOXI1Q12951 378 aa4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 DNASE1L3Q13609 305 aa4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 TAF12Q16514 161 aa4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 AARS2Q5JTZ9 985 aaKnown RBP4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 HECTD2Q5U5R9 776 aa4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 RRAGAQ7L523 313 aa4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 KRT27Q7Z3Y8 459 aa4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 SFTPA1Q8IWL2 248 aa4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 NGEFQ8N5V2 710 aa4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 BEND2Q8NDZ0 799 aa4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 HMGB4Q8WW32 186 aa4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 PDLIM2Q96JY6 352 aa4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 TBATAQ96M53 351 aa4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 LENG8Q96PV6 779 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 NAP1L4Q99733 375 aaKnown RBP4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 THAP7Q9BT49 309 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 TWSG1Q9GZX9 223 aa4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 C9orf78Q9NZ63 289 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 FOXJ2Q9P0K8 574 aa4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 FEM1BQ9UK73 627 aa4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 NOL7Q9UMY1 257 aaKnown RBP4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 ZBTB1Q9Y2K1 713 aa4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 PRDM15P57071 1507 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P16-201ENST00000447155 SCAF11Q99590 1463 aaKnown RBP4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 CARMIL1Q5VZK9 1371 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 ADCY10Q96PN6 1610 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 LOC105369274A0A096LPK9 316 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 LOC102723532A0A0G2JNH3 316 aa4.95□□□□□ -1.62
HMGB1P16-201ENST00000447155 TMEM191CA6NGB0 347 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms