RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.96■■□□□ 1.11
VSX1-206ENST00000444511 CTNND2Q9UQB3 1225 aa21.96■■□□□ 1.11
VSX1-206ENST00000444511 TNRC6BQ9UPQ9 1833 aaKnown RBP21.95■■□□□ 1.1
VSX1-206ENST00000444511 PPP1R3GB7ZBB8 358 aa21.95■■□□□ 1.1
VSX1-206ENST00000444511 MSI1O43347 362 aaKnown RBP21.95■■□□□ 1.1
VSX1-206ENST00000444511 TIMM44O43615 452 aa21.95■■□□□ 1.1
VSX1-206ENST00000444511 BRD2P25440 801 aaKnown RBP21.95■■□□□ 1.1
VSX1-206ENST00000444511 ENPP2Q13822 863 aa21.95■■□□□ 1.1
VSX1-206ENST00000444511 ZNF234Q14588 700 aa21.95■■□□□ 1.1
VSX1-206ENST00000444511 SYCP2LQ5T4T6 812 aa21.95■■□□□ 1.1
VSX1-206ENST00000444511 PMF1Q6P1K2 205 aa21.95■■□□□ 1.1
VSX1-206ENST00000444511 FOXR2Q6PJQ5 311 aa21.95■■□□□ 1.1
VSX1-206ENST00000444511 METTL3Q86U44 580 aaKnown RBP21.95■■□□□ 1.1
VSX1-206ENST00000444511 RBBP8NLQ8NC74 664 aaPredicted RBP21.95■■□□□ 1.1
VSX1-206ENST00000444511 DEFB124Q8NES8 71 aa21.95■■□□□ 1.1
VSX1-206ENST00000444511 SLC35F5Q8WV83 523 aa21.95■■□□□ 1.1
VSX1-206ENST00000444511 IRGQQ8WZA9 623 aa21.95■■□□□ 1.1
VSX1-206ENST00000444511 GOLGA1Q92805 767 aa21.95■■□□□ 1.1
VSX1-206ENST00000444511 FOXJ1Q92949 421 aa21.95■■□□□ 1.1
VSX1-206ENST00000444511 MKRN2Q9H000 416 aaKnown RBP21.95■■□□□ 1.1
VSX1-206ENST00000444511 FSCN3Q9NQT6 498 aa21.95■■□□□ 1.1
VSX1-206ENST00000444511 RNF225M0QZC1 329 aaPredicted RBP21.94■■□□□ 1.1
VSX1-206ENST00000444511 PIK3R2O00459 728 aa21.94■■□□□ 1.1
VSX1-206ENST00000444511 BIN1O00499 593 aa21.94■■□□□ 1.1
VSX1-206ENST00000444511 LATS1O95835 1130 aa21.94■■□□□ 1.1
VSX1-206ENST00000444511 BMP6P22004 513 aa21.94■■□□□ 1.1
VSX1-206ENST00000444511 HOXD9P28356 352 aaPredicted RBP21.94■■□□□ 1.1
VSX1-206ENST00000444511 CD6P30203 668 aa21.94■■□□□ 1.1
VSX1-206ENST00000444511 MORC3Q14149 939 aa21.94■■□□□ 1.1
VSX1-206ENST00000444511 ADGRF1Q5T601 910 aa21.94■■□□□ 1.1
VSX1-206ENST00000444511 SERPINA13PQ6UXR4 307 aa21.94■■□□□ 1.1
VSX1-206ENST00000444511 RRAGAQ7L523 313 aa21.94■■□□□ 1.1
VSX1-206ENST00000444511 HDDC3Q8N4P3 179 aa21.94■■□□□ 1.1
VSX1-206ENST00000444511 LMO3Q8TAP4 145 aa21.94■■□□□ 1.1
VSX1-206ENST00000444511 SORCS1Q8WY21 1168 aa21.94■■□□□ 1.1
VSX1-206ENST00000444511 TMA16Q96EY4 203 aaKnown RBP21.94■■□□□ 1.1
VSX1-206ENST00000444511 ZNF419Q96HQ0 510 aaPredicted RBP21.94■■□□□ 1.1
VSX1-206ENST00000444511 SLC32A1Q9H598 525 aa21.94■■□□□ 1.1
VSX1-206ENST00000444511 CAPN10Q9HC96 672 aa21.94■■□□□ 1.1
VSX1-206ENST00000444511 STOML2Q9UJZ1 356 aa21.94■■□□□ 1.1
VSX1-206ENST00000444511 EPG5Q9HCE0 2579 aa21.94■■□□□ 1.1
VSX1-206ENST00000444511 GNA14O95837 355 aa21.93■■□□□ 1.1
VSX1-206ENST00000444511 EPHX1P07099 455 aa21.93■■□□□ 1.1
VSX1-206ENST00000444511 STX17P56962 302 aa21.93■■□□□ 1.1
VSX1-206ENST00000444511 GCNT1Q02742 428 aa21.93■■□□□ 1.1
VSX1-206ENST00000444511 FOXC1Q12948 553 aa21.93■■□□□ 1.1
VSX1-206ENST00000444511 WDR45BQ5MNZ6 344 aa21.93■■□□□ 1.1
VSX1-206ENST00000444511 TMEM215Q68D42 235 aa21.93■■□□□ 1.1
VSX1-206ENST00000444511 MSANTD2Q6P1R3 559 aa21.93■■□□□ 1.1
VSX1-206ENST00000444511 TMPRSS6Q8IU80 811 aa21.93■■□□□ 1.1
VSX1-206ENST00000444511 ARHGEF19Q8IW93 802 aa21.93■■□□□ 1.1
VSX1-206ENST00000444511 EHBP1Q8NDI1 1231 aa21.93■■□□□ 1.1
VSX1-206ENST00000444511 PRCCQ92733 491 aaPredicted RBP21.93■■□□□ 1.1
VSX1-206ENST00000444511 SIPA1Q96FS4 1042 aa21.93■■□□□ 1.1
VSX1-206ENST00000444511 TOE1Q96GM8 510 aaKnown RBP21.93■■□□□ 1.1
VSX1-206ENST00000444511 ZSWIM1Q9BR11 485 aa21.93■■□□□ 1.1
VSX1-206ENST00000444511 ITM2CQ9NQX7 267 aa21.93■■□□□ 1.1
VSX1-206ENST00000444511 USP36Q9P275 1121 aaKnown RBP21.93■■□□□ 1.1
VSX1-206ENST00000444511 SUSD2Q9UGT4 822 aa21.93■■□□□ 1.1
VSX1-206ENST00000444511 GABBR2O75899 941 aa21.92■■□□□ 1.1
VSX1-206ENST00000444511 CALCAP01258 141 aa21.92■■□□□ 1.1
VSX1-206ENST00000444511 LTFP02788 710 aa21.92■■□□□ 1.1
VSX1-206ENST00000444511 SYPP08247 313 aa21.92■■□□□ 1.1
VSX1-206ENST00000444511 NCAM1P13591 858 aa21.92■■□□□ 1.1
VSX1-206ENST00000444511 PRKCHP24723 683 aa21.92■■□□□ 1.1
VSX1-206ENST00000444511 KCNH2Q12809 1159 aa21.92■■□□□ 1.1
VSX1-206ENST00000444511 PAK1Q13153 545 aa21.92■■□□□ 1.1
VSX1-206ENST00000444511 TRIM59Q8IWR1 403 aa21.92■■□□□ 1.1
VSX1-206ENST00000444511 WFIKKN2Q8TEU8 576 aa21.92■■□□□ 1.1
VSX1-206ENST00000444511 HSFY1Q96LI6 401 aa21.92■■□□□ 1.1
VSX1-206ENST00000444511 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.92■■□□□ 1.1
VSX1-206ENST00000444511 MEI4A8MW99 385 aa21.91■■□□□ 1.1
VSX1-206ENST00000444511 ARHGAP33O14559 1287 aa21.91■■□□□ 1.1
VSX1-206ENST00000444511 OPHN1O60890 802 aa21.91■■□□□ 1.1
VSX1-206ENST00000444511 KRT37O76014 449 aa21.91■■□□□ 1.1
VSX1-206ENST00000444511 FBXO21O94952 628 aa21.91■■□□□ 1.1
VSX1-206ENST00000444511 AFPP02771 609 aaKnown RBP21.91■■□□□ 1.1
VSX1-206ENST00000444511 ACADMP11310 421 aa21.91■■□□□ 1.1
VSX1-206ENST00000444511 GNSP15586 552 aa21.91■■□□□ 1.1
VSX1-206ENST00000444511 HLA-FP30511 346 aa21.91■■□□□ 1.1
VSX1-206ENST00000444511 SLC11A2P49281 568 aa21.91■■□□□ 1.1
VSX1-206ENST00000444511 PLEKHG6Q3KR16 790 aa21.91■■□□□ 1.1
VSX1-206ENST00000444511 NUGGCQ68CJ6 796 aa21.91■■□□□ 1.1
VSX1-206ENST00000444511 CACUL1Q86Y37 369 aa21.91■■□□□ 1.1
VSX1-206ENST00000444511 UNC45BQ8IWX7 931 aa21.91■■□□□ 1.1
VSX1-206ENST00000444511 MINDY1Q8N5J2 469 aa21.91■■□□□ 1.1
VSX1-206ENST00000444511 CLEC4CQ8WTT0 213 aa21.91■■□□□ 1.1
VSX1-206ENST00000444511 GPR174Q9BXC1 333 aa21.91■■□□□ 1.1
VSX1-206ENST00000444511 MIS12Q9H081 205 aa21.91■■□□□ 1.1
VSX1-206ENST00000444511 ABCB8Q9NUT2 735 aa21.91■■□□□ 1.1
VSX1-206ENST00000444511 WSB2Q9NYS7 404 aaPredicted RBP21.91■■□□□ 1.1
VSX1-206ENST00000444511 PLA2G4CQ9UP65 541 aa21.91■■□□□ 1.1
VSX1-206ENST00000444511 CHD8Q9HCK8 2581 aa21.9■■□□□ 1.1
VSX1-206ENST00000444511 GADD45BO75293 160 aaPredicted RBP21.9■■□□□ 1.1
VSX1-206ENST00000444511 OXTRP30559 389 aa21.9■■□□□ 1.1
VSX1-206ENST00000444511 TPMTP51580 245 aa21.9■■□□□ 1.1
VSX1-206ENST00000444511 COPAP53621 1224 aa21.9■■□□□ 1.1
VSX1-206ENST00000444511 TBX4P57082 545 aa21.9■■□□□ 1.1
VSX1-206ENST00000444511 SEMA3BQ13214 749 aa21.9■■□□□ 1.1
VSX1-206ENST00000444511 FNDC3BQ53EP0 1204 aaKnown RBP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms