RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 SLU7O95391 586 aaKnown RBP4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 EYA4O95677 639 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 UBTFL6P0CB48 400 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 SRGAP2BP0DMP2 458 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 PLS3P13797 630 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 PTPN2P17706 415 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 M6PRP20645 277 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 NFKBIAP25963 317 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 GDI1P31150 447 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 STAT5AP42229 794 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 LIFRP42702 1097 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 GSDMDP57764 484 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 EXOSC9Q06265 439 aaKnown RBP4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 KRTAP1-1Q07627 177 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 IFRD2Q12894 506 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 SLC14A1Q13336 389 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 ADAM9Q13443 819 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 COTL1Q14019 142 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 HNRNPDQ14103 355 aaKnown RBP4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 CASP8Q14790 479 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 CR1LQ2VPA4 569 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 LEXMQ3ZCV2 418 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 HSP90AA5PQ58FG0 334 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 VWA5B1Q5TIE3 1220 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 IL23RQ5VWK5 629 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 SLC30A6Q6NXT4 461 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 CAVIN1Q6NZI2 390 aaKnown RBP4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 METTL2BQ6P1Q9 378 aaKnown RBP4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 SARM1Q6SZW1 724 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 CLEC2AQ6UVW9 174 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 ZYG11AQ6WRX3 759 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 DCP2Q8IU60 420 aaKnown RBP4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 CCDC50Q8IVM0 306 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 SLC22A9Q8IVM8 553 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 ANKRD35Q8N283 1001 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 UBR7Q8N806 425 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 C2orf69Q8N8R5 385 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 FAM71DQ8N9W8 422 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 NSUN7Q8NE18 718 aaKnown RBP4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 DNERQ8NFT8 737 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 NEK11Q8NG66 645 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 MOSPD2Q8NHP6 518 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 SLC30A5Q8TAD4 765 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 PHOSPHO2Q8TCD6 241 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 WASF1Q92558 559 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 SLC9A6Q92581 669 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 COPS5Q92905 334 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 NINJ1Q92982 152 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 KISS1RQ969F8 398 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 EFHD2Q96C19 240 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 LTV1Q96GA3 475 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 LCORQ96JN0 433 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 PGBD1Q96JS3 809 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 CNOT6LQ96LI5 555 aaKnown RBP4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 UBXN10Q96LJ8 280 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 WWC2-AS2Q96NR7 200 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 MMP19Q99542 508 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 LLPHQ9BRT6 129 aaKnown RBP4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 TTLL2Q9BWV7 592 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 NAA15Q9BXJ9 866 aaKnown RBP4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 STN1Q9H668 368 aaKnown RBP4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 AZI2Q9H6S1 392 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 IFT22Q9H7X7 185 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 PHAXQ9H814 394 aaKnown RBP4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 LY9Q9HBG7 655 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 MRM3Q9HC36 420 aaKnown RBP4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 MAN1C1Q9NR34 630 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 RXFP3Q9NSD7 469 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 TBCCD1Q9NVR7 557 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 PAQR5Q9NXK6 330 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 NDUFA13Q9P0J0 144 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 MARCH2Q9P0N8 246 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 DPP7Q9UHL4 492 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 ZBTB1Q9Y2K1 713 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 PCDHGB5Q9Y5G0 923 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 DMRT1Q9Y5R6 373 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 TRPV2Q9Y5S1 764 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 TROQ12816 1431 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 NPATQ14207 1427 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 FLT1P17948 1338 aa4.95□□□□□ -1.62
HMGB3P9-201ENST00000441799 SETD1AO15047 1707 aaKnown RBP4.94□□□□□ -1.62
HMGB3P9-201ENST00000441799 POLR1AO95602 1720 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P9-201ENST00000441799 KIF14Q15058 1648 aa4.94□□□□□ -1.62
HMGB3P9-201ENST00000441799 TRBV23OR9-2A0A075B6M9 112 aa4.94□□□□□ -1.62
HMGB3P9-201ENST00000441799 WDR91A4D1P6 747 aa4.94□□□□□ -1.62
HMGB3P9-201ENST00000441799 C9orf118A6NHY6 69 aa4.94□□□□□ -1.62
HMGB3P9-201ENST00000441799 ERVV-2B6SEH9 535 aa4.94□□□□□ -1.62
HMGB3P9-201ENST00000441799 DDX39AO00148 427 aaKnown RBP4.94□□□□□ -1.62
HMGB3P9-201ENST00000441799 ARNTLO00327 626 aa4.94□□□□□ -1.62
HMGB3P9-201ENST00000441799 CYR61O00622 381 aa4.94□□□□□ -1.62
HMGB3P9-201ENST00000441799 PRPSAP2O60256 369 aa4.94□□□□□ -1.62
HMGB3P9-201ENST00000441799 CIDEAO60543 219 aa4.94□□□□□ -1.62
HMGB3P9-201ENST00000441799 SMPD2O60906 423 aa4.94□□□□□ -1.62
HMGB3P9-201ENST00000441799 SMIM24O75264 130 aa4.94□□□□□ -1.62
HMGB3P9-201ENST00000441799 SEC22BO75396 215 aa4.94□□□□□ -1.62
HMGB3P9-201ENST00000441799 SOAT2O75908 522 aa4.94□□□□□ -1.62
HMGB3P9-201ENST00000441799 CALM1P0DP23 149 aa4.94□□□□□ -1.62
HMGB3P9-201ENST00000441799 CALM2P0DP24 149 aa4.94□□□□□ -1.62
HMGB3P9-201ENST00000441799 CALM3P0DP25 149 aa4.94□□□□□ -1.62
HMGB3P9-201ENST00000441799 ZNF28P17035 718 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms