RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 TMEM74BQ9NUR3 256 aa9.68□□□□□ -0.86
NUP50-206ENST00000422489 THAP10Q9P2Z0 257 aaPredicted RBP9.68□□□□□ -0.86
NUP50-206ENST00000422489 PLA2G4CQ9UP65 541 aa9.68□□□□□ -0.86
NUP50-206ENST00000422489 NAALADL1Q9UQQ1 740 aa9.68□□□□□ -0.86
NUP50-206ENST00000422489 PTPRDP23468 1912 aa9.68□□□□□ -0.86
NUP50-206ENST00000422489 DENND4CQ5VZ89 1909 aa9.68□□□□□ -0.86
NUP50-206ENST00000422489 ANAPC1Q9H1A4 1944 aa9.68□□□□□ -0.86
NUP50-206ENST00000422489 FANCMQ8IYD8 2048 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 ATXN2Q99700 1313 aaKnown RBP9.67□□□□□ -0.86
NUP50-206ENST00000422489 IGHV1OR15-9A0A0B4J2B8 117 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 PES1O00541 588 aaKnown RBP9.67□□□□□ -0.86
NUP50-206ENST00000422489 ACSL4O60488 711 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 MOCS2O96007 188 aaPredicted RBP9.67□□□□□ -0.86
NUP50-206ENST00000422489 CFIP05156 583 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 EPHX1P07099 455 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 ITPKAP23677 461 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 GNA15P30679 374 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 ACADSBP45954 432 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 MAPK8P45983 427 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 ZNF33AQ06730 810 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 ZNF234Q14588 700 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 E2F5Q15329 346 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 EXOC3L4Q17RC7 722 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 FUT11Q495W5 492 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 FNDC3BQ53EP0 1204 aaKnown RBP9.67□□□□□ -0.86
NUP50-206ENST00000422489 HSP90AA4PQ58FG1 418 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 TRIM61Q5EBN2 209 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 DAB2IPQ5VWQ8 1189 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 CHST9Q7L1S5 443 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 ENOSF1Q7L5Y1 443 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 IRF2BP1Q8IU81 584 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 SYT12Q8IV01 421 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 MRGPRX1Q96LB2 322 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 DCBLD2Q96PD2 775 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 NUSAP1Q9BXS6 441 aaKnown RBP9.67□□□□□ -0.86
NUP50-206ENST00000422489 CLSTN2Q9H4D0 955 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 CD93Q9NPY3 652 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 TMEM9BQ9NQ34 198 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 FSCN3Q9NQT6 498 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 ABCB8Q9NUT2 735 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 CNTN6Q9UQ52 1028 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 VPS13AQ96RL7 3174 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 CFAP54Q96N23 3096 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 OTOGLQ3ZCN5 2332 aa9.67□□□□□ -0.86
NUP50-206ENST00000422489 SYNJ2BP-COX16A0A087WUM0 186 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 E5RJQ4 531 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 TM4SF5O14894 197 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 NPC1O15118 1278 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 SART1O43290 800 aaKnown RBP9.66□□□□□ -0.86
NUP50-206ENST00000422489 LATS1O95835 1130 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 FYNP06241 537 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 ACADMP11310 421 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 HLA-EP13747 358 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 PRKCSHP14314 528 aaPredicted RBP9.66□□□□□ -0.86
NUP50-206ENST00000422489 POLR2EP19388 210 aaKnown RBP9.66□□□□□ -0.86
NUP50-206ENST00000422489 HOXD9P28356 352 aaPredicted RBP9.66□□□□□ -0.86
NUP50-206ENST00000422489 ANP32AP39687 249 aaKnown RBP9.66□□□□□ -0.86
NUP50-206ENST00000422489 SGSHP51688 502 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 ATXN3P54252 364 aaPredicted RBP9.66□□□□□ -0.86
NUP50-206ENST00000422489 PTK2Q05397 1052 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 EIF4HQ15056 248 aaKnown RBP9.66□□□□□ -0.86
NUP50-206ENST00000422489 SPDYCQ5MJ68 293 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 N4BP2L1Q5TBK1 243 aaPredicted RBP9.66□□□□□ -0.86
NUP50-206ENST00000422489 PIK3R6Q5UE93 754 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 SYPL2Q5VXT5 272 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 NUGGCQ68CJ6 796 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 TMEM215Q68D42 235 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 MBLAC2Q68D91 279 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 MSANTD2Q6P1R3 559 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 TRIM65Q6PJ69 517 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 SERPINA13PQ6UXR4 307 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 CACUL1Q86Y37 369 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 TMPRSS6Q8IU80 811 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 PASD1Q8IV76 773 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 CCDC117Q8IWD4 279 aaPredicted RBP9.66□□□□□ -0.86
NUP50-206ENST00000422489 FAM114A1Q8IWE2 563 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 FAM217AQ8IXS0 508 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 CARNMT1Q8N4J0 409 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 DQX1Q8TE96 717 aaKnown RBP9.66□□□□□ -0.86
NUP50-206ENST00000422489 CYB5D2Q8WUJ1 264 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 PRCCQ92733 491 aaPredicted RBP9.66□□□□□ -0.86
NUP50-206ENST00000422489 RNF34Q969K3 372 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 SIPA1Q96FS4 1042 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 FAM81BQ96LP2 452 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 DDX50Q9BQ39 737 aaKnown RBP9.66□□□□□ -0.86
NUP50-206ENST00000422489 GTPBP2Q9BX10 602 aaKnown RBP9.66□□□□□ -0.86
NUP50-206ENST00000422489 LSM14BQ9BX40 385 aaKnown RBP9.66□□□□□ -0.86
NUP50-206ENST00000422489 SLC4A5Q9BY07 1137 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 PDCL3Q9H2J4 239 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 ITM2CQ9NQX7 267 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 COX16Q9P0S2 106 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 CYTH4Q9UIA0 394 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 STOML2Q9UJZ1 356 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 DNAJC12Q9UKB3 198 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 SLC6A14Q9UN76 642 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 SPTBN4Q9H254 2564 aa9.66□□□□□ -0.86
NUP50-206ENST00000422489 LNP1A1A4G5 178 aa9.65□□□□□ -0.86
NUP50-206ENST00000422489 TYW5A2RUC4 315 aaKnown RBP9.65□□□□□ -0.86
NUP50-206ENST00000422489 BECN2A8MW95 431 aa9.65□□□□□ -0.86
NUP50-206ENST00000422489 FOXN3O00409 490 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms