RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 PLEKHH3Q7Z736 793 aa15.91■□□□□ 0.14
CPSF7-202ENST00000394888 B3GALNT2Q8NCR0 500 aa15.91■□□□□ 0.14
CPSF7-202ENST00000394888 FAM13CQ8NE31 585 aa15.91■□□□□ 0.14
CPSF7-202ENST00000394888 BEST2Q8NFU1 509 aa15.91■□□□□ 0.14
CPSF7-202ENST00000394888 ZFP42Q96MM3 310 aa15.91■□□□□ 0.14
CPSF7-202ENST00000394888 ARL8BQ9NVJ2 186 aa15.91■□□□□ 0.14
CPSF7-202ENST00000394888 UBQLN1Q9UMX0 589 aaKnown RBP15.91■□□□□ 0.14
CPSF7-202ENST00000394888 DOCK4Q8N1I0 1966 aa15.91■□□□□ 0.14
CPSF7-202ENST00000394888 GREB1Q4ZG55 1949 aa15.91■□□□□ 0.14
CPSF7-202ENST00000394888 CAPN14A8MX76 684 aa15.91■□□□□ 0.14
CPSF7-202ENST00000394888 TRIM49D1C9J1S8 452 aa15.91■□□□□ 0.14
CPSF7-202ENST00000394888 TGDSO95455 350 aa15.91■□□□□ 0.14
CPSF7-202ENST00000394888 CCNG1P51959 295 aa15.91■□□□□ 0.14
CPSF7-202ENST00000394888 EIF4EBP2Q13542 120 aaPredicted RBP15.91■□□□□ 0.14
CPSF7-202ENST00000394888 DEFB106AQ8N104 65 aa15.91■□□□□ 0.14
CPSF7-202ENST00000394888 TBC1D10AQ9BXI6 508 aa15.91■□□□□ 0.14
CPSF7-202ENST00000394888 DHX35Q9H5Z1 703 aaKnown RBP15.91■□□□□ 0.14
CPSF7-202ENST00000394888 MIOSQ9NXC5 875 aa15.91■□□□□ 0.14
CPSF7-202ENST00000394888 ZC3H7BQ9UGR2 993 aaKnown RBP15.91■□□□□ 0.14
CPSF7-202ENST00000394888 SPAG6O75602 509 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 CYP2C9P11712 490 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 CRADDP78560 199 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 ADIGQ0VDE8 80 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 RAB41Q5JT25 222 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 TTC39BQ5VTQ0 682 aaPredicted RBP15.9■□□□□ 0.14
CPSF7-202ENST00000394888 NPWQ8N729 165 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 INPP5DQ92835 1189 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 ZNF570Q96NI8 536 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 LRRC37BQ96QE4 947 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 DUSP16Q9BY84 665 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 DYNC1LI2O43237 492 aaPredicted RBP15.9■□□□□ 0.14
CPSF7-202ENST00000394888 DAB1O75553 588 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 ECM2O94769 699 aaPredicted RBP15.9■□□□□ 0.14
CPSF7-202ENST00000394888 ZBED1O96006 694 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 SERPINB4P48594 390 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 NR2C2P49116 596 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 ANKRD20A2Q5SQ80 823 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 ANKRD20A1Q5TYW2 823 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 ANKRD20A3Q5VUR7 823 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 FAM91A1Q658Y4 838 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 TIFABQ6ZNK6 161 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 FAM131BQ86XD5 332 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 FBXO27Q8NI29 283 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 KCTD13Q8WZ19 329 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 GINS2Q9Y248 185 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 VWA8A3KMH1 1905 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 LAMA2P24043 3122 aaKnown RBP15.9■□□□□ 0.14
CPSF7-202ENST00000394888 WFS1O76024 890 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 GTF2A1P52655 376 aaPredicted RBP15.9■□□□□ 0.14
CPSF7-202ENST00000394888 YWHAGP61981 247 aaKnown RBP eCLIP15.9■□□□□ 0.14
CPSF7-202ENST00000394888 E2F5Q15329 346 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 PCBP1Q15365 356 aaKnown RBP eCLIP15.9■□□□□ 0.141e-15■■■■■ 80.2
CPSF7-202ENST00000394888 HHATQ5VTY9 493 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 RFWD3Q6PCD5 774 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 TLK2Q86UE8 772 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 LRRC39Q96DD0 335 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 HSFY1Q96LI6 401 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 SPON1Q9HCB6 807 aa15.9■□□□□ 0.14
CPSF7-202ENST00000394888 SF3B1O75533 1304 aaKnown RBP eCLIP15.89■□□□□ 0.137e-6■■■■■ 28.7
CPSF7-202ENST00000394888 ACAT1P24752 427 aaKnown RBP15.89■□□□□ 0.13
CPSF7-202ENST00000394888 PAFAH1B3Q15102 231 aaKnown RBP15.89■□□□□ 0.13
CPSF7-202ENST00000394888 PNMA8AQ86V59 439 aaPredicted RBP15.89■□□□□ 0.13
CPSF7-202ENST00000394888 TRPV1Q8NER1 839 aa15.89■□□□□ 0.13
CPSF7-202ENST00000394888 OR6Y1Q8NGX8 325 aa15.89■□□□□ 0.13
CPSF7-202ENST00000394888 APOL6Q9BWW8 343 aa15.89■□□□□ 0.13
CPSF7-202ENST00000394888 PIH1D1Q9NWS0 290 aaKnown RBP15.89■□□□□ 0.13
CPSF7-202ENST00000394888 EPHB2P29323 1055 aa15.89■□□□□ 0.13
CPSF7-202ENST00000394888 GLUD2P49448 558 aa15.89■□□□□ 0.13
CPSF7-202ENST00000394888 BEX3Q00994 111 aa15.89■□□□□ 0.13
CPSF7-202ENST00000394888 DENND5BQ6ZUT9 1274 aa15.89■□□□□ 0.13
CPSF7-202ENST00000394888 MAP7D3Q8IWC1 876 aa15.89■□□□□ 0.13
CPSF7-202ENST00000394888 FCRL3Q96P31 734 aaPredicted RBP15.89■□□□□ 0.13
CPSF7-202ENST00000394888 SMOQ99835 787 aa15.89■□□□□ 0.13
CPSF7-202ENST00000394888 PAAF1Q9BRP4 392 aa15.89■□□□□ 0.13
CPSF7-202ENST00000394888 FRMD8Q9BZ67 464 aaPredicted RBP15.89■□□□□ 0.13
CPSF7-202ENST00000394888 BAIAP2L1Q9UHR4 511 aa15.89■□□□□ 0.13
CPSF7-202ENST00000394888 PIN4Q9Y237 131 aaKnown RBP15.89■□□□□ 0.13
CPSF7-202ENST00000394888 THSD7BQ9C0I4 1608 aa15.89■□□□□ 0.13
CPSF7-202ENST00000394888 KCTD11Q693B1 232 aa15.89■□□□□ 0.13
CPSF7-202ENST00000394888 MAVSQ7Z434 540 aa15.89■□□□□ 0.13
CPSF7-202ENST00000394888 DPP9Q86TI2 863 aa15.89■□□□□ 0.13
CPSF7-202ENST00000394888 TBC1D31Q96DN5 1066 aa15.89■□□□□ 0.13
CPSF7-202ENST00000394888 PKMYT1Q99640 499 aa15.89■□□□□ 0.13
CPSF7-202ENST00000394888 CADM1Q9BY67 442 aaKnown RBP15.89■□□□□ 0.13
CPSF7-202ENST00000394888 CEP41Q9BYV8 373 aa15.89■□□□□ 0.13
CPSF7-202ENST00000394888 KLC2Q9H0B6 622 aa15.89■□□□□ 0.13
CPSF7-202ENST00000394888 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.89■□□□□ 0.135e-9■■□□□ 12.4
CPSF7-202ENST00000394888 TTC3P53804 2025 aa15.88■□□□□ 0.13
CPSF7-202ENST00000394888 AXLP30530 894 aa15.88■□□□□ 0.13
CPSF7-202ENST00000394888 PSEN2P49810 448 aa15.88■□□□□ 0.13
CPSF7-202ENST00000394888 PPM1NQ8N819 430 aa15.88■□□□□ 0.13
CPSF7-202ENST00000394888 GSDMBQ8TAX9 411 aa15.88■□□□□ 0.13
CPSF7-202ENST00000394888 HTR3CQ8WXA8 447 aa15.88■□□□□ 0.13
CPSF7-202ENST00000394888 P2RY11Q96G91 374 aa15.88■□□□□ 0.13
CPSF7-202ENST00000394888 IL1RAPL1Q9NZN1 696 aa15.88■□□□□ 0.13
CPSF7-202ENST00000394888 A0A0A0MRY4 1105 aa15.88■□□□□ 0.13
CPSF7-202ENST00000394888 IQANK1A0A1B0GTG1 560 aa15.88■□□□□ 0.13
CPSF7-202ENST00000394888 FAM237BA0A1B0GVD1 139 aa15.88■□□□□ 0.13
CPSF7-202ENST00000394888 MT-ND3P03897 115 aa15.88■□□□□ 0.13
CPSF7-202ENST00000394888 CD68P34810 354 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms