RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 ADRA1BP35368 520 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 FDFT1P37268 417 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 GLUD2P49448 558 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 CACNA2D1P54289 1103 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 SLC18A2Q05940 514 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 DEUP1Q05D60 604 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 SF3A3Q12874 501 aaKnown RBP eCLIP9.35□□□□□ -0.91
TDP1-202ENST00000393452 PAFAH1B3Q15102 231 aaKnown RBP9.35□□□□□ -0.91
TDP1-202ENST00000393452 ANKRD20A2Q5SQ80 823 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 ANKRD20A1Q5TYW2 823 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 ANKRD20A3Q5VUR7 823 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 RNF43Q68DV7 783 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 LVRNQ6Q4G3 990 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 DSTYKQ6XUX3 929 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 GPRIN1Q7Z2K8 1008 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 LRRC6Q86X45 466 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 GBP7Q8N8V2 638 aaPredicted RBP9.35□□□□□ -0.91
TDP1-202ENST00000393452 KLHDC9Q8NEP7 349 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 KCNK16Q96T55 309 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 LGMNQ99538 433 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 PAIP2Q9BPZ3 127 aaKnown RBP9.35□□□□□ -0.91
TDP1-202ENST00000393452 RTP3Q9BQQ7 232 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 PAAF1Q9BRP4 392 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 XAB2Q9HCS7 855 aaKnown RBP9.35□□□□□ -0.91
TDP1-202ENST00000393452 RRN3Q9NYV6 651 aa9.35□□□□□ -0.91
TDP1-202ENST00000393452 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.35□□□□□ -0.91
TDP1-202ENST00000393452 TIMM13Q9Y5L4 95 aaPredicted RBP9.35□□□□□ -0.91
TDP1-202ENST00000393452 NUP205Q92621 2012 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 A0A0U1RQF3 1178 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 CASTOR2A6NHX0 329 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 H0YHG0 523 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 I6L893 689 aaPredicted RBP9.34□□□□□ -0.91
TDP1-202ENST00000393452 EDF1O60869 148 aaKnown RBP9.34□□□□□ -0.91
TDP1-202ENST00000393452 OPHN1O60890 802 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 RASSF9O75901 435 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 APOEP02649 317 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 CYP11A1P05108 521 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 ASGR1P07306 291 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 INHBAP08476 426 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 DHRS4L1P0CG22 281 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 MLNP12872 115 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 CST5P28325 142 aaPredicted RBP9.34□□□□□ -0.91
TDP1-202ENST00000393452 GBP2P32456 591 aaPredicted RBP9.34□□□□□ -0.91
TDP1-202ENST00000393452 HCAR3P49019 387 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 CACNB2Q08289 660 aaPredicted RBP9.34□□□□□ -0.91
TDP1-202ENST00000393452 TRIM32Q13049 653 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 DNAJC3Q13217 504 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 PDK1Q15118 436 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 HHATQ5VTY9 493 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 FBXW10Q5XX13 1052 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 FAM171BQ6P995 826 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 CD300LGQ6UXG3 332 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 RFX8Q6ZV50 586 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 CYS1Q717R9 158 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 BHLHA9Q7RTU4 235 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 SLC26A11Q86WA9 606 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 SCML4Q8N228 414 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 TCP10LQ8TDR4 215 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 SPOCK2Q92563 424 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 CFAP36Q96G28 342 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 SMARCD1Q96GM5 515 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 ZIC5Q96T25 663 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 EBNA1BP2Q99848 306 aaKnown RBP9.34□□□□□ -0.91
TDP1-202ENST00000393452 VPS11Q9H270 941 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 EIF2B3Q9NR50 452 aaKnown RBP9.34□□□□□ -0.91
TDP1-202ENST00000393452 IKBKGQ9Y6K9 419 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 LTFP02788 710 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 MT-ND3P03897 115 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 ADRA1DP25100 572 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 CD52P31358 61 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 THPOP40225 353 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 ETV4P43268 484 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 NEK3P51956 506 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 MGAT5Q09328 741 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 FAAP100Q0VG06 881 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 NME3Q13232 169 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 KCNA10Q16322 511 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 UNC5AQ6ZN44 842 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 CCDC33Q8N5R6 958 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 GSDMBQ8TAX9 411 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 SLC7A14Q8TBB6 771 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 APBB2Q92870 758 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 P2RY11Q96G91 374 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 SERAC1Q96JX3 654 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 PKMYT1Q99640 499 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 ACBD6Q9BR61 282 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 RXFP1Q9HBX9 757 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 SLCO1B3Q9NPD5 702 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 XPNPEP3Q9NQH7 507 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 ANLNQ9NQW6 1124 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 HAUS2Q9NVX0 235 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 KLHL14Q9P2G3 628 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 FBXW11Q9UKB1 542 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 PHTF1Q9UMS5 762 aa9.34□□□□□ -0.91
TDP1-202ENST00000393452 NLRC5Q86WI3 1866 aa9.33□□□□□ -0.92
TDP1-202ENST00000393452 PATJQ8NI35 1801 aa9.33□□□□□ -0.92
TDP1-202ENST00000393452 FAM159BA6NKW6 160 aa9.33□□□□□ -0.92
TDP1-202ENST00000393452 CXorf49A8MYA2 514 aaPredicted RBP9.33□□□□□ -0.92
TDP1-202ENST00000393452 M0QZQ0 153 aa9.33□□□□□ -0.92
TDP1-202ENST00000393452 EEF2KO00418 725 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms