RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 CPT1AP50416 773 aa17.52■□□□□ 0.4
SNAPC3-202ENST00000380821 MICALL2Q8IY33 904 aa17.52■□□□□ 0.4
SNAPC3-202ENST00000380821 REXO4Q9GZR2 422 aaKnown RBP17.52■□□□□ 0.4
SNAPC3-202ENST00000380821 GPRC5CQ9NQ84 441 aa17.52■□□□□ 0.4
SNAPC3-202ENST00000380821 KCNH4Q9UQ05 1017 aa17.52■□□□□ 0.4
SNAPC3-202ENST00000380821 C15orf38-AP3S2A0A0A6YYH1 394 aa17.52■□□□□ 0.4
SNAPC3-202ENST00000380821 KBTBD13C9JR72 458 aa17.52■□□□□ 0.4
SNAPC3-202ENST00000380821 ALDH1A3P47895 512 aa17.52■□□□□ 0.4
SNAPC3-202ENST00000380821 ITGA1P56199 1179 aa17.52■□□□□ 0.4
SNAPC3-202ENST00000380821 SNAPC2Q13487 334 aa17.52■□□□□ 0.4
SNAPC3-202ENST00000380821 NEDD8Q15843 81 aa17.52■□□□□ 0.4
SNAPC3-202ENST00000380821 SCARA3Q6AZY7 606 aa17.52■□□□□ 0.4
SNAPC3-202ENST00000380821 ARPINQ7Z6K5 226 aa17.52■□□□□ 0.4
SNAPC3-202ENST00000380821 DPY30Q9C005 99 aa17.52■□□□□ 0.4
SNAPC3-202ENST00000380821 CD3EAPO15446 510 aaKnown RBP17.52■□□□□ 0.39
SNAPC3-202ENST00000380821 TBC1D12O60347 775 aa17.52■□□□□ 0.39
SNAPC3-202ENST00000380821 CBX6O95503 412 aa17.52■□□□□ 0.39
SNAPC3-202ENST00000380821 SEC23AQ15436 765 aa17.52■□□□□ 0.39
SNAPC3-202ENST00000380821 CCDC149Q6ZUS6 474 aa17.52■□□□□ 0.39
SNAPC3-202ENST00000380821 C4orf19Q8IY42 314 aa17.52■□□□□ 0.39
SNAPC3-202ENST00000380821 SIX5Q8N196 739 aa17.52■□□□□ 0.39
SNAPC3-202ENST00000380821 DHRSXQ8N5I4 330 aa17.52■□□□□ 0.39
SNAPC3-202ENST00000380821 EMILIN2Q9BXX0 1053 aa17.52■□□□□ 0.39
SNAPC3-202ENST00000380821 KLHL31Q9H511 634 aa17.52■□□□□ 0.39
SNAPC3-202ENST00000380821 ZSCAN5CA6NGD5 496 aaPredicted RBP17.52■□□□□ 0.39
SNAPC3-202ENST00000380821 PIK3R1P27986 724 aa17.52■□□□□ 0.39
SNAPC3-202ENST00000380821 ZNF268Q14587 947 aaPredicted RBP17.52■□□□□ 0.39
SNAPC3-202ENST00000380821 TSEN2Q8NCE0 465 aaKnown RBP17.52■□□□□ 0.39
SNAPC3-202ENST00000380821 ACTRT2Q8TDY3 377 aa17.52■□□□□ 0.39
SNAPC3-202ENST00000380821 TATDN2Q93075 761 aa17.52■□□□□ 0.39
SNAPC3-202ENST00000380821 POP1Q99575 1024 aaKnown RBP17.52■□□□□ 0.39
SNAPC3-202ENST00000380821 SEPHS2Q99611 448 aa17.52■□□□□ 0.39
SNAPC3-202ENST00000380821 SLC25A23Q9BV35 468 aa17.52■□□□□ 0.39
SNAPC3-202ENST00000380821 AGXT2Q9BYV1 514 aa17.52■□□□□ 0.39
SNAPC3-202ENST00000380821 UBE2Q2LH0YL09 131 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 H7C4K7 107 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 GPC1P35052 558 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 PTPN11Q06124 597 aaPredicted RBP17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 ITGB3BPQ13352 177 aaPredicted RBP17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 TMEM119Q4V9L6 283 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 PRR5LQ6MZQ0 368 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 SLC5A5Q92911 643 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 PARK7Q99497 189 aaKnown RBP17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 CLEC4MQ9H2X3 399 aaPredicted RBP17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 RPS6KB2Q9UBS0 482 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 CEP152O94986 1710 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 MAP3K6O95382 1288 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 SLC2A4P14672 509 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 CAMK2GQ13555 558 aaPredicted RBP17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 ZNF544Q6NX49 715 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 ARMC6Q6NXE6 501 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 CHMP1BQ7LBR1 199 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 MREGQ8N565 214 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 UBXN6Q9BZV1 441 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 STK39Q9UEW8 545 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 ITGA11Q9UKX5 1188 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 PNMA8BQ9ULN7 279 aaPredicted RBP17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 KATNA1O75449 491 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 EGFRP00533 1210 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 OR1G1P47890 313 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 SERPINH1P50454 418 aaKnown RBP17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 SLC20A2Q08357 652 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 DDX39BQ13838 428 aaKnown RBP17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 PDIA6Q15084 440 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 SEZ6Q53EL9 994 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 DCUN1D5Q9BTE7 237 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 ADGRE3Q9BY15 652 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 ELOVL6Q9H5J4 265 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 DSEQ9UL01 958 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 AHCYL1O43865 530 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 STAG3L1P0CL83 205 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 MSH3P20585 1137 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 NR6A1Q15406 480 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 NTRK3Q16288 839 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 TRHDEQ9UKU6 1024 aa17.51■□□□□ 0.39
SNAPC3-202ENST00000380821 SNX32Q86XE0 403 aa17.5■□□□□ 0.39
SNAPC3-202ENST00000380821 ENKURQ8TC29 256 aa17.5■□□□□ 0.39
SNAPC3-202ENST00000380821 PRDM16Q9HAZ2 1276 aa17.5■□□□□ 0.39
SNAPC3-202ENST00000380821 TSPOAP1O95153 1857 aa17.5■□□□□ 0.39
SNAPC3-202ENST00000380821 ZC3H13Q5T200 1668 aaKnown RBP17.5■□□□□ 0.39
SNAPC3-202ENST00000380821 C17orf102A2RUQ5 167 aa17.5■□□□□ 0.39
SNAPC3-202ENST00000380821 HS6ST1O60243 411 aa17.5■□□□□ 0.39
SNAPC3-202ENST00000380821 MYCP01106 439 aaPredicted RBP17.5■□□□□ 0.39
SNAPC3-202ENST00000380821 EPS8Q12929 822 aa17.5■□□□□ 0.39
SNAPC3-202ENST00000380821 MSLNQ13421 630 aaPredicted RBP17.5■□□□□ 0.39
SNAPC3-202ENST00000380821 CASP12Q6UXS9 341 aa17.5■□□□□ 0.39
SNAPC3-202ENST00000380821 NOL6Q9H6R4 1146 aaKnown RBP17.5■□□□□ 0.39
SNAPC3-202ENST00000380821 INPP4BO15327 924 aa17.5■□□□□ 0.39
SNAPC3-202ENST00000380821 KRT6AP02538 564 aa17.5■□□□□ 0.39
SNAPC3-202ENST00000380821 KRT6BP04259 564 aa17.5■□□□□ 0.39
SNAPC3-202ENST00000380821 CAPN1P07384 714 aa17.5■□□□□ 0.39
SNAPC3-202ENST00000380821 ETS1P14921 441 aa17.5■□□□□ 0.39
SNAPC3-202ENST00000380821 KRT6CP48668 564 aa17.5■□□□□ 0.39
SNAPC3-202ENST00000380821 HK2P52789 917 aa17.5■□□□□ 0.39
SNAPC3-202ENST00000380821 AMHR2Q16671 573 aa17.5■□□□□ 0.39
SNAPC3-202ENST00000380821 GLRA4Q5JXX5 417 aa17.5■□□□□ 0.39
SNAPC3-202ENST00000380821 ARHGEF19Q8IW93 802 aa17.5■□□□□ 0.39
SNAPC3-202ENST00000380821 C10orf53Q8N6V4 93 aa17.5■□□□□ 0.39
SNAPC3-202ENST00000380821 RNFT2Q96EX2 444 aa17.5■□□□□ 0.39
SNAPC3-202ENST00000380821 CDRT15Q96T59 188 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms