RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 CCDC150Q8NCX0 1101 aa14.44□□□□□ -0.1
CXCL12-202ENST00000374426 PRCCQ92733 491 aaPredicted RBP14.44□□□□□ -0.1
CXCL12-202ENST00000374426 TMEM176AQ96HP8 235 aa14.44□□□□□ -0.1
CXCL12-202ENST00000374426 SLC2A11Q9BYW1 496 aa14.44□□□□□ -0.1
CXCL12-202ENST00000374426 UBXN6Q9BZV1 441 aa14.44□□□□□ -0.1
CXCL12-202ENST00000374426 CIPCQ9C0C6 399 aa14.44□□□□□ -0.1
CXCL12-202ENST00000374426 DNAI2Q9GZS0 605 aa14.44□□□□□ -0.1
CXCL12-202ENST00000374426 PCOLCE2Q9UKZ9 415 aa14.44□□□□□ -0.1
CXCL12-202ENST00000374426 STRIP2Q9ULQ0 834 aa14.44□□□□□ -0.1
CXCL12-202ENST00000374426 BCAT2O15382 392 aaPredicted RBP14.43□□□□□ -0.1
CXCL12-202ENST00000374426 EPHX1P07099 455 aa14.43□□□□□ -0.1
CXCL12-202ENST00000374426 RPL13P26373 211 aaKnown RBP14.43□□□□□ -0.1
CXCL12-202ENST00000374426 OXTRP30559 389 aa14.43□□□□□ -0.1
CXCL12-202ENST00000374426 TKTL1P51854 596 aa14.43□□□□□ -0.1
CXCL12-202ENST00000374426 NDUFA8P51970 172 aa14.43□□□□□ -0.1
CXCL12-202ENST00000374426 SCAPQ12770 1279 aa14.43□□□□□ -0.1
CXCL12-202ENST00000374426 ADAM9Q13443 819 aa14.43□□□□□ -0.1
CXCL12-202ENST00000374426 ARHGAP17Q68EM7 881 aa14.43□□□□□ -0.1
CXCL12-202ENST00000374426 PM20D1Q6GTS8 502 aa14.43□□□□□ -0.1
CXCL12-202ENST00000374426 SERPINA13PQ6UXR4 307 aa14.43□□□□□ -0.1
CXCL12-202ENST00000374426 GLRX5Q86SX6 157 aa14.43□□□□□ -0.1
CXCL12-202ENST00000374426 SLCO6A1Q86UG4 719 aa14.43□□□□□ -0.1
CXCL12-202ENST00000374426 HSCBQ8IWL3 235 aa14.43□□□□□ -0.1
CXCL12-202ENST00000374426 ANKRD52Q8NB46 1076 aa14.43□□□□□ -0.1
CXCL12-202ENST00000374426 SPRYD3Q8NCJ5 442 aa14.43□□□□□ -0.1
CXCL12-202ENST00000374426 C1orf216Q8TAB5 229 aa14.43□□□□□ -0.1
CXCL12-202ENST00000374426 DDI1Q8WTU0 396 aa14.43□□□□□ -0.1
CXCL12-202ENST00000374426 NDRG1Q92597 394 aaKnown RBP14.43□□□□□ -0.1
CXCL12-202ENST00000374426 PLD4Q96BZ4 506 aa14.43□□□□□ -0.1
CXCL12-202ENST00000374426 EEF2KMTQ96G04 330 aa14.43□□□□□ -0.1
CXCL12-202ENST00000374426 FAXDC2Q96IV6 333 aa14.43□□□□□ -0.1
CXCL12-202ENST00000374426 NUP58Q9BVL2 599 aa14.43□□□□□ -0.1
CXCL12-202ENST00000374426 GAREM1Q9H706 876 aa14.43□□□□□ -0.1
CXCL12-202ENST00000374426 EIF2B4Q9UI10 523 aaKnown RBP14.43□□□□□ -0.1
CXCL12-202ENST00000374426 FNDC3AQ9Y2H6 1198 aaKnown RBP14.43□□□□□ -0.1
CXCL12-202ENST00000374426 SLCO1B1Q9Y6L6 691 aa14.43□□□□□ -0.1
CXCL12-202ENST00000374426 FAM237AA0A1B0GTK4 181 aa14.42□□□□□ -0.1
CXCL12-202ENST00000374426 TULP2O00295 520 aa14.42□□□□□ -0.1
CXCL12-202ENST00000374426 TIMM44O43615 452 aa14.42□□□□□ -0.1
CXCL12-202ENST00000374426 ZBED1O96006 694 aa14.42□□□□□ -0.1
CXCL12-202ENST00000374426 ZNF883P0CG24 379 aa14.42□□□□□ -0.1
CXCL12-202ENST00000374426 ACADMP11310 421 aa14.42□□□□□ -0.1
CXCL12-202ENST00000374426 HLA-EP13747 358 aa14.42□□□□□ -0.1
CXCL12-202ENST00000374426 HOXD9P28356 352 aaPredicted RBP14.42□□□□□ -0.1
CXCL12-202ENST00000374426 SYKP43405 635 aa14.42□□□□□ -0.1
CXCL12-202ENST00000374426 MXI1P50539 228 aa14.42□□□□□ -0.1
CXCL12-202ENST00000374426 E2F5Q15329 346 aa14.42□□□□□ -0.1
CXCL12-202ENST00000374426 TRIP4Q15650 581 aaPredicted RBP14.42□□□□□ -0.1
CXCL12-202ENST00000374426 CCNI2Q6ZMN8 369 aaPredicted RBP14.42□□□□□ -0.1
CXCL12-202ENST00000374426 FAM124AQ86V42 546 aa14.42□□□□□ -0.1
CXCL12-202ENST00000374426 TTC39CQ8N584 583 aa14.42□□□□□ -0.1
CXCL12-202ENST00000374426 FBXL13Q8NEE6 735 aa14.42□□□□□ -0.1
CXCL12-202ENST00000374426 TATDN2Q93075 761 aa14.42□□□□□ -0.1
CXCL12-202ENST00000374426 ULBP1Q9BZM6 244 aa14.42□□□□□ -0.1
CXCL12-202ENST00000374426 TM7SF3Q9NS93 570 aa14.42□□□□□ -0.1
CXCL12-202ENST00000374426 RAB20Q9NX57 234 aa14.42□□□□□ -0.1
CXCL12-202ENST00000374426 APOBEC2Q9Y235 224 aaKnown RBP14.42□□□□□ -0.1
CXCL12-202ENST00000374426 GOLGA4Q13439 2230 aaKnown RBP14.42□□□□□ -0.1
CXCL12-202ENST00000374426 PLXNB3Q9ULL4 1909 aa14.41□□□□□ -0.1
CXCL12-202ENST00000374426 CER1O95813 267 aa14.41□□□□□ -0.1
CXCL12-202ENST00000374426 C7P10643 843 aa14.41□□□□□ -0.1
CXCL12-202ENST00000374426 HLA-FP30511 346 aa14.41□□□□□ -0.1
CXCL12-202ENST00000374426 MATKP42679 507 aa14.41□□□□□ -0.1
CXCL12-202ENST00000374426 PDE4CQ08493 712 aa14.41□□□□□ -0.1
CXCL12-202ENST00000374426 CAMK2GQ13555 558 aaPredicted RBP14.41□□□□□ -0.1
CXCL12-202ENST00000374426 HLA-BQ31612 363 aa14.41□□□□□ -0.1
CXCL12-202ENST00000374426 MPPE1Q53F39 396 aa14.41□□□□□ -0.1
CXCL12-202ENST00000374426 IL27RAQ6UWB1 636 aa14.41□□□□□ -0.1
CXCL12-202ENST00000374426 DBX2Q6ZNG2 339 aa14.41□□□□□ -0.1
CXCL12-202ENST00000374426 FMNL3Q8IVF7 1028 aa14.41□□□□□ -0.1
CXCL12-202ENST00000374426 OR2T3Q8NH03 318 aa14.41□□□□□ -0.1
CXCL12-202ENST00000374426 BAHD1Q8TBE0 780 aaPredicted RBP14.41□□□□□ -0.1
CXCL12-202ENST00000374426 SETD7Q8WTS6 366 aaKnown RBP14.41□□□□□ -0.1
CXCL12-202ENST00000374426 CCDC47Q96A33 483 aaKnown RBP14.41□□□□□ -0.1
CXCL12-202ENST00000374426 SPATA32Q96LK8 384 aa14.41□□□□□ -0.1
CXCL12-202ENST00000374426 PCED1AQ9H1Q7 454 aa14.41□□□□□ -0.1
CXCL12-202ENST00000374426 TMEM245Q9H330 911 aa14.41□□□□□ -0.1
CXCL12-202ENST00000374426 TOR4AQ9NXH8 423 aa14.41□□□□□ -0.1
CXCL12-202ENST00000374426 GPSM3Q9Y4H4 160 aa14.41□□□□□ -0.1
CXCL12-202ENST00000374426 A0A1B0GVT2 93 aa14.4□□□□□ -0.1
CXCL12-202ENST00000374426 XPO1O14980 1071 aaKnown RBP14.4□□□□□ -0.1
CXCL12-202ENST00000374426 TSPAN3O60637 253 aa14.4□□□□□ -0.1
CXCL12-202ENST00000374426 ACSL1P33121 698 aa14.4□□□□□ -0.1
CXCL12-202ENST00000374426 HARS2P49590 506 aaKnown RBP14.4□□□□□ -0.1
CXCL12-202ENST00000374426 CSNK1EP49674 416 aaKnown RBP14.4□□□□□ -0.1
CXCL12-202ENST00000374426 SLC8A3P57103 927 aa14.4□□□□□ -0.1
CXCL12-202ENST00000374426 ARID5AQ03989 594 aa14.4□□□□□ -0.1
CXCL12-202ENST00000374426 GOLGA7BQ2TAP0 167 aa14.4□□□□□ -0.1
CXCL12-202ENST00000374426 EDRF1Q3B7T1 1238 aa14.4□□□□□ -0.1
CXCL12-202ENST00000374426 KRBA2Q6ZNG9 492 aa14.4□□□□□ -0.1
CXCL12-202ENST00000374426 ZNF366Q8N895 744 aa14.4□□□□□ -0.1
CXCL12-202ENST00000374426 CYB5D2Q8WUJ1 264 aa14.4□□□□□ -0.1
CXCL12-202ENST00000374426 LHX5Q9H2C1 402 aa14.4□□□□□ -0.1
CXCL12-202ENST00000374426 C6orf106Q9H6K1 298 aaPredicted RBP14.4□□□□□ -0.1
CXCL12-202ENST00000374426 OLA1Q9NTK5 396 aaKnown RBP14.4□□□□□ -0.1
CXCL12-202ENST00000374426 KIAA1522Q9P206 1035 aaPredicted RBP14.4□□□□□ -0.1
CXCL12-202ENST00000374426 SFMBT1Q9UHJ3 866 aa14.4□□□□□ -0.1
CXCL12-202ENST00000374426 STOML2Q9UJZ1 356 aa14.4□□□□□ -0.1
CXCL12-202ENST00000374426 TSPAN16Q9UKR8 245 aa14.4□□□□□ -0.1
CXCL12-202ENST00000374426 HBS1LQ9Y450 684 aaKnown RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms