RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 IQANK1A0A1B0GTG1 560 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 E7ESA3 106 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 H0YJX3 145 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 COPEO14579 308 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 ATP2A1O14983 1001 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 SNAP91O60641 907 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 LYPLA1O75608 230 aaPredicted RBP9.83□□□□□ -0.84
SF3A3-201ENST00000373019 RFX1P22670 979 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 TGM1P22735 817 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 NKX2-5P52952 324 aaPredicted RBP9.83□□□□□ -0.84
SF3A3-201ENST00000373019 ESRRGP62508 458 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 OTUD4Q01804 1114 aaKnown RBP9.83□□□□□ -0.84
SF3A3-201ENST00000373019 PTP4A2Q12974 167 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 RAB39AQ14964 217 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 SPCS2Q15005 226 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 INAVAQ3KP66 663 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 PPP6R3Q5H9R7 873 aaPredicted RBP9.83□□□□□ -0.84
SF3A3-201ENST00000373019 SCARA3Q6AZY7 606 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 USP17L2Q6R6M4 530 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 CATSPER3Q86XQ3 398 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 LRRC49Q8IUZ0 686 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 NUDCD3Q8IVD9 361 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 FAM71AQ8IYT1 594 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 CALML6Q8TD86 181 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 TP53INP1Q96A56 240 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 COA7Q96BR5 231 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 CMTM5Q96DZ9 223 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 DYNLL2Q96FJ2 89 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 OSBPL11Q9BXB4 747 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 ANKRD60Q9BZ19 345 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 SLC7A5P2Q9GIP4 190 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 CRNNQ9UBG3 495 aaPredicted RBP9.83□□□□□ -0.84
SF3A3-201ENST00000373019 SNCAIPQ9Y6H5 919 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 SFI1A8K8P3 1242 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 MEIS1O00470 390 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 RIMBP2O15034 1052 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 GSRP00390 522 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 KRT10P13645 584 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 NPR1P16066 1061 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 RHBDL3P58872 404 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 FLOT2Q14254 428 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 SBK1Q52WX2 424 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 DSG4Q86SJ6 1040 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 RHPN2Q8IUC4 686 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 MASTLQ96GX5 879 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 FEM1CQ96JP0 617 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 CLSTN3Q9BQT9 956 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 TMEM117Q9H0C3 514 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 KLQ9UEF7 1012 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 TCRBV7S3A2A0A539 114 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 FAM155AB1AL88 458 aaPredicted RBP9.83□□□□□ -0.84
SF3A3-201ENST00000373019 ZNF195O14628 629 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 MSI1O43347 362 aaKnown RBP9.83□□□□□ -0.84
SF3A3-201ENST00000373019 GCATO75600 419 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 PARNO95453 639 aaKnown RBP9.83□□□□□ -0.84
SF3A3-201ENST00000373019 C1QAP02745 245 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 USP17L8P0C7I0 530 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 COX4I1P13073 169 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 CD58P19256 250 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 HPCAL1P37235 193 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 TRAF2Q12933 501 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 NME3Q13232 169 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 NFIL3Q16649 462 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 PPM1LQ5SGD2 360 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 KAZNQ674X7 775 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 SLC51AQ86UW1 340 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 SNX29P2Q8IUI4 249 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 BHLHE22Q8NFJ8 381 aaPredicted RBP9.83□□□□□ -0.84
SF3A3-201ENST00000373019 PIWIL2Q8TC59 973 aaKnown RBP9.83□□□□□ -0.84
SF3A3-201ENST00000373019 CAPSLQ8WWF8 208 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 DMAC2Q9NW81 257 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 DUS2Q9NX74 493 aaKnown RBP9.83□□□□□ -0.84
SF3A3-201ENST00000373019 ARHGAP26Q9UNA1 814 aa9.83□□□□□ -0.84
SF3A3-201ENST00000373019 APOBEC2Q9Y235 224 aaKnown RBP9.83□□□□□ -0.84
SF3A3-201ENST00000373019 A0A087WXM4 84 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 ZBTB14O43829 449 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 NR4A2P43354 598 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 IDH3AP50213 366 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 ATP6V0D1P61421 351 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 DGKDQ16760 1214 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 PIGGQ5H8A4 983 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 NHSL2Q5HYW2 709 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 KRT80Q6KB66 452 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 DRICH1Q6PGQ1 229 aaPredicted RBP9.82□□□□□ -0.84
SF3A3-201ENST00000373019 EXOC8Q8IYI6 725 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 CLIP4Q8N3C7 705 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 DDX1Q92499 740 aaKnown RBP9.82□□□□□ -0.84
SF3A3-201ENST00000373019 CPT1BQ92523 772 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 RTFDC1Q9BY42 306 aaPredicted RBP9.82□□□□□ -0.84
SF3A3-201ENST00000373019 SEMA6AQ9H2E6 1030 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 IFT122Q9HBG6 1241 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 GINM1Q9NU53 330 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 DDX56Q9NY93 547 aaKnown RBP9.82□□□□□ -0.84
SF3A3-201ENST00000373019 SLC27A5Q9Y2P5 690 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 PCDHGA8Q9Y5G5 932 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 TANC1Q9C0D5 1861 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 TCRBV9S1A1TA0A576 114 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 C6orf229H3BNL8 230 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 GNAO1P09471 354 aa9.82□□□□□ -0.84
SF3A3-201ENST00000373019 HOXD10P28358 340 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms