RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 GJA9P57773 515 aa18.65■□□□□ 0.58
CD40-201ENST00000372276 SLC10A2Q12908 348 aaPredicted RBP18.65■□□□□ 0.58
CD40-201ENST00000372276 KRT72Q14CN4 511 aa18.65■□□□□ 0.58
CD40-201ENST00000372276 KYAT3Q6YP21 454 aaKnown RBP18.65■□□□□ 0.58
CD40-201ENST00000372276 MARK2Q7KZI7 788 aaKnown RBP18.65■□□□□ 0.58
CD40-201ENST00000372276 ATP2A3Q93084 1043 aa18.65■□□□□ 0.58
CD40-201ENST00000372276 WNT8BQ93098 351 aa18.65■□□□□ 0.58
CD40-201ENST00000372276 FAM111AQ96PZ2 611 aa18.65■□□□□ 0.58
CD40-201ENST00000372276 CHST12Q9NRB3 414 aa18.65■□□□□ 0.58
CD40-201ENST00000372276 NOP53Q9NZM5 478 aaKnown RBP18.65■□□□□ 0.58
CD40-201ENST00000372276 E7ENQ6 273 aa18.64■□□□□ 0.57
CD40-201ENST00000372276 AP3B1O00203 1094 aa18.64■□□□□ 0.57
CD40-201ENST00000372276 CYB561D2O14569 222 aa18.64■□□□□ 0.57
CD40-201ENST00000372276 F9P00740 461 aa18.64■□□□□ 0.57
CD40-201ENST00000372276 FAM200BP0CF97 657 aa18.64■□□□□ 0.57
CD40-201ENST00000372276 ZNF865P0CJ78 1059 aaPredicted RBP18.64■□□□□ 0.57
CD40-201ENST00000372276 AMPD1P23109 780 aa18.64■□□□□ 0.57
CD40-201ENST00000372276 HOXC8P31273 242 aa18.64■□□□□ 0.57
CD40-201ENST00000372276 NRLP54845 237 aa18.64■□□□□ 0.57
CD40-201ENST00000372276 WASHC2DQ5SRD0 308 aa18.64■□□□□ 0.57
CD40-201ENST00000372276 PRPF39Q86UA1 669 aaKnown RBP18.64■□□□□ 0.57
CD40-201ENST00000372276 RSPH3Q86UC2 560 aa18.64■□□□□ 0.57
CD40-201ENST00000372276 CCDC185Q8N715 623 aa18.64■□□□□ 0.57
CD40-201ENST00000372276 ANKLE1Q8NAG6 615 aa18.64■□□□□ 0.57
CD40-201ENST00000372276 RNF139Q8WU17 664 aa18.64■□□□□ 0.57
CD40-201ENST00000372276 DEPDC1BQ8WUY9 529 aa18.64■□□□□ 0.57
CD40-201ENST00000372276 FAM149B1Q96BN6 582 aa18.64■□□□□ 0.57
CD40-201ENST00000372276 TRIM62Q9BVG3 475 aa18.64■□□□□ 0.57
CD40-201ENST00000372276 TLE6Q9H808 572 aa18.64■□□□□ 0.57
CD40-201ENST00000372276 ARHGEF4Q9NR80 690 aa18.64■□□□□ 0.57
CD40-201ENST00000372276 KCNK4Q9NYG8 393 aa18.64■□□□□ 0.57
CD40-201ENST00000372276 IGSF9Q9P2J2 1179 aa18.64■□□□□ 0.57
CD40-201ENST00000372276 PTCH2Q9Y6C5 1203 aa18.64■□□□□ 0.57
CD40-201ENST00000372276 WDR91A4D1P6 747 aa18.63■□□□□ 0.57
CD40-201ENST00000372276 ERI2A8K979 691 aaKnown RBP18.63■□□□□ 0.57
CD40-201ENST00000372276 CCDC22O60826 627 aa18.63■□□□□ 0.57
CD40-201ENST00000372276 LMNAP02545 664 aaKnown RBP18.63■□□□□ 0.57
CD40-201ENST00000372276 PGAM1P18669 254 aa18.63■□□□□ 0.57
CD40-201ENST00000372276 SCAPQ12770 1279 aa18.63■□□□□ 0.57
CD40-201ENST00000372276 FRG1Q14331 258 aaKnown RBP18.63■□□□□ 0.57
CD40-201ENST00000372276 NBPF20Q3BBV1 942 aa18.63■□□□□ 0.57
CD40-201ENST00000372276 ARL13BQ3SXY8 428 aa18.63■□□□□ 0.57
CD40-201ENST00000372276 ZNF534Q76KX8 674 aa18.63■□□□□ 0.57
CD40-201ENST00000372276 CLNKQ7Z7G1 428 aa18.63■□□□□ 0.57
CD40-201ENST00000372276 CLEC4CQ8WTT0 213 aa18.63■□□□□ 0.57
CD40-201ENST00000372276 KLF6Q99612 283 aaPredicted RBP18.63■□□□□ 0.57
CD40-201ENST00000372276 CXCL16Q9H2A7 254 aa18.63■□□□□ 0.57
CD40-201ENST00000372276 FAM96AQ9H5X1 160 aa18.63■□□□□ 0.57
CD40-201ENST00000372276 EBF2Q9HAK2 575 aa18.63■□□□□ 0.57
CD40-201ENST00000372276 CNGB3Q9NQW8 809 aa18.63■□□□□ 0.57
CD40-201ENST00000372276 RFPL1O75677 317 aa18.63■□□□□ 0.57
CD40-201ENST00000372276 HAUS5O94927 633 aa18.63■□□□□ 0.57
CD40-201ENST00000372276 MYL3P08590 195 aa18.63■□□□□ 0.57
CD40-201ENST00000372276 GOT1P17174 413 aa18.63■□□□□ 0.57
CD40-201ENST00000372276 TFE3P19532 575 aaPredicted RBP18.63■□□□□ 0.57
CD40-201ENST00000372276 DEUP1Q05D60 604 aa18.63■□□□□ 0.57
CD40-201ENST00000372276 ADIGQ0VDE8 80 aa18.63■□□□□ 0.57
CD40-201ENST00000372276 TAF1BQ53T94 588 aaPredicted RBP18.63■□□□□ 0.57
CD40-201ENST00000372276 DCAF6Q58WW2 860 aa18.63■□□□□ 0.57
CD40-201ENST00000372276 TWF2Q6IBS0 349 aaKnown RBP18.63■□□□□ 0.57
CD40-201ENST00000372276 COLGALT1Q8NBJ5 622 aa18.63■□□□□ 0.57
CD40-201ENST00000372276 SMG8Q8ND04 991 aaKnown RBP18.63■□□□□ 0.57
CD40-201ENST00000372276 E2F7Q96AV8 911 aa18.63■□□□□ 0.57
CD40-201ENST00000372276 PGAP3Q96FM1 320 aaPredicted RBP18.63■□□□□ 0.57
CD40-201ENST00000372276 PPP1R10Q96QC0 940 aaKnown RBP18.63■□□□□ 0.57
CD40-201ENST00000372276 YY1AP1Q9H869 796 aa18.63■□□□□ 0.57
CD40-201ENST00000372276 KLK14Q9P0G3 267 aa18.63■□□□□ 0.57
CD40-201ENST00000372276 SIRPGQ9P1W8 387 aa18.63■□□□□ 0.57
CD40-201ENST00000372276 STK38LQ9Y2H1 464 aa18.63■□□□□ 0.57
CD40-201ENST00000372276 TREHO43280 583 aa18.62■□□□□ 0.57
CD40-201ENST00000372276 ADCY6O43306 1168 aa18.62■□□□□ 0.57
CD40-201ENST00000372276 MX2P20592 715 aa18.62■□□□□ 0.57
CD40-201ENST00000372276 DNAJB2P25686 324 aa18.62■□□□□ 0.57
CD40-201ENST00000372276 RPL9P32969 192 aaKnown RBP18.62■□□□□ 0.57
CD40-201ENST00000372276 ZBTB16Q05516 673 aa18.62■□□□□ 0.57
CD40-201ENST00000372276 IFRD2Q12894 506 aaPredicted RBP18.62■□□□□ 0.57
CD40-201ENST00000372276 TBCCQ15814 346 aa18.62■□□□□ 0.57
CD40-201ENST00000372276 INSCQ1MX18 579 aa18.62■□□□□ 0.57
CD40-201ENST00000372276 FAXCQ5TGI0 409 aa18.62■□□□□ 0.57
CD40-201ENST00000372276 MTDHQ86UE4 582 aaKnown RBP18.62■□□□□ 0.57
CD40-201ENST00000372276 KIF2BQ8N4N8 673 aa18.62■□□□□ 0.57
CD40-201ENST00000372276 NSL1Q96IY1 281 aa18.62■□□□□ 0.57
CD40-201ENST00000372276 MED10Q9BTT4 135 aa18.62■□□□□ 0.57
CD40-201ENST00000372276 DCDC2Q9UHG0 476 aa18.62■□□□□ 0.57
CD40-201ENST00000372276 M0QYT0 321 aa18.61■□□□□ 0.57
CD40-201ENST00000372276 EEF2KO00418 725 aaKnown RBP18.61■□□□□ 0.57
CD40-201ENST00000372276 RGS2P41220 211 aa18.61■□□□□ 0.57
CD40-201ENST00000372276 GARSP41250 739 aaKnown RBP18.61■□□□□ 0.57
CD40-201ENST00000372276 OSTM1Q86WC4 334 aa18.61■□□□□ 0.57
CD40-201ENST00000372276 FAM131BQ86XD5 332 aa18.61■□□□□ 0.57
CD40-201ENST00000372276 NUDCD3Q8IVD9 361 aa18.61■□□□□ 0.57
CD40-201ENST00000372276 ARHGAP24Q8N264 748 aa18.61■□□□□ 0.57
CD40-201ENST00000372276 TMEM40Q8WWA1 233 aa18.61■□□□□ 0.57
CD40-201ENST00000372276 IRGQQ8WZA9 623 aa18.61■□□□□ 0.57
CD40-201ENST00000372276 VAT1Q99536 393 aa18.61■□□□□ 0.57
CD40-201ENST00000372276 ADAM33Q9BZ11 813 aa18.61■□□□□ 0.57
CD40-201ENST00000372276 HAO1Q9UJM8 370 aa18.61■□□□□ 0.57
CD40-201ENST00000372276 CDH9Q9ULB4 789 aa18.61■□□□□ 0.57
CD40-201ENST00000372276 SORCS3Q9UPU3 1222 aa18.61■□□□□ 0.57
CD40-201ENST00000372276 MAGEB16A2A368 324 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms