RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 C1orf21Q9H246 121 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 MRPL46Q9H2W6 279 aaKnown RBP3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 RABEP2Q9H5N1 569 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 VCPKMTQ9H867 229 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 ATP13A1Q9HD20 1204 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 DDX4Q9NQI0 724 aaKnown RBP3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 GFOD1Q9NXC2 390 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 ADGRE2Q9UHX3 823 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 TEKT2Q9UIF3 430 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 ZNF451Q9Y4E5 1061 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 PHIPQ8WWQ0 1821 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 PRR5-ARHGAP8B1AHC4 643 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 SHOXO15266 292 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 RIPK2O43353 540 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 THAP12O43422 761 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 NCK2O43639 380 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 GAS7O60861 476 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 PPM1BO75688 479 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 FGF18O76093 207 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 PRAMEF1O95521 474 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 ITGB1P05556 798 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 ATP5BP06576 529 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 SNRNP70P08621 437 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 C6orf222P0C671 652 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 CD247P20963 164 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 TPP2P29144 1249 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 ICAM3P32942 547 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 IL13P35225 146 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 MTIF2P46199 727 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 ATP5OP48047 213 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 KIF11P52732 1056 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 ARFIP1P53367 373 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 CASP6P55212 293 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 CCNA1P78396 465 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 COG7P83436 770 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 ARHGAP8P85298 464 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 GRSF1Q12849 480 aaKnown RBP eCLIP3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 IKZF1Q13422 519 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 SNW1Q13573 536 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 ACVR2BQ13705 512 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 SSPNQ14714 243 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 COG2Q14746 738 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 INAQ16352 499 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 SV2CQ496J9 727 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 NOL9Q5SY16 702 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 PIK3R6Q5UE93 754 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 TPGS2Q68CL5 300 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 FCRLBQ6BAA4 426 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 IKBIPQ70UQ0 350 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 SLFN11Q7Z7L1 901 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 ZNF605Q86T29 641 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 KRT222Q8N1A0 295 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 VPS52Q8N1B4 723 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 MIER2Q8N344 545 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 OR52K1Q8NGK4 314 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 BCL7CQ8WUZ0 217 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 LRTOMTQ8WZ04 291 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 EXOC4Q96A65 974 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 LRIG1Q96JA1 1093 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 FEM1CQ96JP0 617 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 CABS1Q96KC9 395 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 TMEM237Q96Q45 408 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 NTPCRQ9BSD7 190 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 CNPPD1Q9BV87 410 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 SEMA4AQ9H3S1 761 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 MFSD1Q9H3U5 465 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 HIPK3Q9H422 1215 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 ACAD9Q9H845 621 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 VTA1Q9NP79 307 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 EMC7Q9NPA0 242 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 XPNPEP3Q9NQH7 507 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 SEPT11Q9NVA2 429 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 C14orf119Q9NWQ9 140 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 DUSP13Q9UII6 198 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 RPS6KA6Q9UK32 745 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 SF3B6Q9Y3B4 125 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 PCDHGB2Q9Y5G2 931 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 SIPA1L3O60292 1781 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 DOPEY2Q9Y3R5 2298 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 A0A1B0GTL3 188 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 A0A1W2PPL8 197 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 SSU72P8A0A1W2PR75 194 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 TCRBV16S1A1N1A0A5B0 115 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 SHISA3A0PJX4 238 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 KRT87PA6NCN2 255 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 CAPN8A6NHC0 703 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 J3QKU1 62 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 L7N2F9 121 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 PRODHO43272 600 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 B3GALT2O43825 422 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 PTP4A3O75365 173 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 TSPAN9O75954 239 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 GLRX3O76003 335 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 CDKL5O76039 1030 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 MED26O95402 600 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 SCGB1D1O95968 90 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 GSNP06396 782 aa3.72□□□□□ -1.81
ECHDC1-205ENST00000368295 EPHX1P07099 455 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms