RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 LBX2Q6XYB7 198 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 PHF13Q86YI8 300 aaPredicted RBP4.99□□□□□ -1.61
SCN3A-202ENST00000360093 TRPM4Q8TD43 1214 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 HELQQ8TDG4 1101 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 HASPINQ8TF76 798 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 TMA16Q96EY4 203 aaKnown RBP4.99□□□□□ -1.61
SCN3A-202ENST00000360093 MAGEB10Q96LZ2 347 aaPredicted RBP4.99□□□□□ -1.61
SCN3A-202ENST00000360093 HTATIP2Q9BUP3 242 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 SPATS2LQ9NUQ6 558 aaKnown RBP4.99□□□□□ -1.61
SCN3A-202ENST00000360093 TSR3Q9UJK0 312 aaKnown RBP4.99□□□□□ -1.61
SCN3A-202ENST00000360093 NCKAP1Q9Y2A7 1128 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 ADGRA2Q96PE1 1338 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 TRAV19A0A0A6YYK7 116 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 H0Y3Z8 333 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 DDX3XO00571 662 aaKnown RBP eCLIP4.99□□□□□ -1.61
SCN3A-202ENST00000360093 CHADO15335 359 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 CAPN15O75808 1086 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 SUPT7LO94864 414 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 PTPN3P26045 913 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 ATP6V1E1P36543 226 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 RAP1GDS1P52306 607 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 DNAJC3Q13217 504 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 GRIK5Q16478 980 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 PARP6Q2NL67 630 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 ZACNQ401N2 412 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 ILDR2Q71H61 639 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 ECSITQ9BQ95 431 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 LACRTQ9GZZ8 138 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 ALG13Q9NP73 1137 aaKnown RBP4.99□□□□□ -1.61
SCN3A-202ENST00000360093 ANLNQ9NQW6 1124 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 TAS2R13Q9NYV9 303 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 FAM153AQ9UHL3 310 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 POLG2Q9UHN1 485 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 A0A087X0B3 334 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 QSOX1O00391 747 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 MYL4P12829 197 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 CD151P48509 253 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 IRAK1P51617 712 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 SOX10P56693 466 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 SKP1P63208 163 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 USP41Q3LFD5 358 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 LYPLAL1Q5VWZ2 237 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 ABHD15Q6UXT9 468 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 USP45Q70EL2 814 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 SCUBE3Q8IX30 993 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 TEX9Q8N6V9 391 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 EPS8L1Q8TE68 723 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 STARD8Q92502 1023 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 GAD1Q99259 594 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 FAM118BQ9BPY3 351 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 SENP6Q9GZR1 1112 aaPredicted RBP4.99□□□□□ -1.61
SCN3A-202ENST00000360093 IARS2Q9NSE4 1012 aaKnown RBP4.99□□□□□ -1.61
SCN3A-202ENST00000360093 MAPRE3Q9UPY8 281 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 SLC45A1Q9Y2W3 748 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 TMEM114B3SHH9 223 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 CYP1A2P05177 515 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 OR56A5P0C7T3 313 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 POU5F1Q01860 360 aaKnown RBP4.98□□□□□ -1.61
SCN3A-202ENST00000360093 CXCL17Q6UXB2 119 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 NUP93Q8N1F7 819 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 SH2D3CQ8N5H7 860 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 EMC1Q8N766 993 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 ATG4AQ8WYN0 398 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 REPS1Q96D71 796 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 HES6Q96HZ4 224 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 PAFAH2Q99487 392 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 FICDQ9BVA6 458 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 NIFKQ9BYG3 293 aaKnown RBP4.98□□□□□ -1.61
SCN3A-202ENST00000360093 ST6GALNAC4Q9H4F1 302 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 NMRAL1Q9HBL8 299 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 GPAMQ9HCL2 828 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 MPP6Q9NZW5 540 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 KAT6AQ92794 2004 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 ASTN2O75129 1339 aaPredicted RBP4.98□□□□□ -1.61
SCN3A-202ENST00000360093 OR6C75A6NL08 312 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 KPNA5O15131 536 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 TRIM16O95361 564 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 MMP3P08254 477 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 MSH3P20585 1137 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 MIPP30301 263 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 RAD23BP54727 409 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 SLC39A12Q504Y0 691 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 SLC45A4Q5BKX6 768 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 HECTD3Q5T447 861 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 CES5AQ6NT32 575 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 PALB2Q86YC2 1186 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 RNF168Q8IYW5 571 aaPredicted RBP4.98□□□□□ -1.61
SCN3A-202ENST00000360093 DEFB106AQ8N104 65 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 B3GALNT2Q8NCR0 500 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 FAM162AQ96A26 154 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 ACSF2Q96CM8 615 aaPredicted RBP4.98□□□□□ -1.61
SCN3A-202ENST00000360093 ERP27Q96DN0 273 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 C12orf42Q96LP6 360 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 ZNF670Q9BS34 389 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 C17orf80Q9BSJ5 609 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 TKTL2Q9H0I9 626 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 LHX5Q9H2C1 402 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 ATXN3LQ9H3M9 355 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 WDR41Q9HAD4 459 aa4.98□□□□□ -1.61
SCN3A-202ENST00000360093 ZCCHC17Q9NP64 241 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms