RNA–Protein interactions for RNA: ENST00000358923.10

PDE4D-204, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-204ENST00000358923 CLUL1Q15846 466 aa18.53■□□□□ 0.56
PDE4D-204ENST00000358923 OTUD1Q5VV17 481 aaPredicted RBP18.53■□□□□ 0.56
PDE4D-204ENST00000358923 SIX6OS1Q8N1H7 587 aa18.53■□□□□ 0.56
PDE4D-204ENST00000358923 KIF2BQ8N4N8 673 aa18.53■□□□□ 0.56
PDE4D-204ENST00000358923 ELAC2Q9BQ52 826 aaKnown RBP18.53■□□□□ 0.56
PDE4D-204ENST00000358923 PABPC3Q9H361 631 aaKnown RBP18.53■□□□□ 0.56
PDE4D-204ENST00000358923 PDLIM1O00151 329 aa18.52■□□□□ 0.56
PDE4D-204ENST00000358923 MSH2P43246 934 aa18.52■□□□□ 0.56
PDE4D-204ENST00000358923 DRG2P55039 364 aaKnown RBP18.52■□□□□ 0.56
PDE4D-204ENST00000358923 ZNF598Q86UK7 904 aaKnown RBP18.52■□□□□ 0.56
PDE4D-204ENST00000358923 HACE1Q8IYU2 909 aa18.52■□□□□ 0.56
PDE4D-204ENST00000358923 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.52■□□□□ 0.56
PDE4D-204ENST00000358923 TTC9BQ8N6N2 239 aa18.52■□□□□ 0.56
PDE4D-204ENST00000358923 FBF1Q8TES7 1133 aa18.52■□□□□ 0.56
PDE4D-204ENST00000358923 FAM72CH0Y354 149 aa18.52■□□□□ 0.56
PDE4D-204ENST00000358923 M0QYT0 321 aa18.52■□□□□ 0.56
PDE4D-204ENST00000358923 RIPK2O43353 540 aa18.52■□□□□ 0.56
PDE4D-204ENST00000358923 CREB1P16220 341 aa18.52■□□□□ 0.56
PDE4D-204ENST00000358923 STILQ15468 1287 aa18.52■□□□□ 0.56
PDE4D-204ENST00000358923 SMAD1Q15797 465 aaKnown RBP18.52■□□□□ 0.56
PDE4D-204ENST00000358923 FAM72AQ5TYM5 149 aa18.52■□□□□ 0.56
PDE4D-204ENST00000358923 RNF220Q5VTB9 566 aa18.52■□□□□ 0.56
PDE4D-204ENST00000358923 FAM72DQ6L9T8 149 aa18.52■□□□□ 0.56
PDE4D-204ENST00000358923 RHBDF2Q6PJF5 856 aa18.52■□□□□ 0.56
PDE4D-204ENST00000358923 FAM72BQ86X60 149 aa18.52■□□□□ 0.56
PDE4D-204ENST00000358923 TTC39CQ8N584 583 aa18.52■□□□□ 0.56
PDE4D-204ENST00000358923 PLD5Q8N7P1 536 aa18.52■□□□□ 0.56
PDE4D-204ENST00000358923 SLC35B2Q8TB61 432 aa18.52■□□□□ 0.56
PDE4D-204ENST00000358923 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.52■□□□□ 0.56
PDE4D-204ENST00000358923 PIGVQ9NUD9 493 aa18.52■□□□□ 0.56
PDE4D-204ENST00000358923 MTRF1LQ9UGC7 380 aaKnown RBP18.52■□□□□ 0.56
PDE4D-204ENST00000358923 C9IYK1 514 aa18.51■□□□□ 0.55
PDE4D-204ENST00000358923 H7C0C1 242 aa18.51■□□□□ 0.55
PDE4D-204ENST00000358923 ZNF623O75123 536 aa18.51■□□□□ 0.55
PDE4D-204ENST00000358923 AVILO75366 819 aa18.51■□□□□ 0.55
PDE4D-204ENST00000358923 ATP5OP48047 213 aa18.51■□□□□ 0.55
PDE4D-204ENST00000358923 NKX3-2P78367 333 aa18.51■□□□□ 0.55
PDE4D-204ENST00000358923 KLC1Q07866 573 aa18.51■□□□□ 0.55
PDE4D-204ENST00000358923 MYBPC3Q14896 1274 aa18.51■□□□□ 0.55
PDE4D-204ENST00000358923 DENND2CQ68D51 928 aa18.51■□□□□ 0.55
PDE4D-204ENST00000358923 BBS12Q6ZW61 710 aa18.51■□□□□ 0.55
PDE4D-204ENST00000358923 SLC7A14Q8TBB6 771 aa18.51■□□□□ 0.55
PDE4D-204ENST00000358923 KCTD15Q96SI1 283 aaPredicted RBP18.51■□□□□ 0.55
PDE4D-204ENST00000358923 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.51■□□□□ 0.55
PDE4D-204ENST00000358923 RNF208Q9H0X6 261 aa18.51■□□□□ 0.55
PDE4D-204ENST00000358923 PIH1D1Q9NWS0 290 aaKnown RBP18.51■□□□□ 0.55
PDE4D-204ENST00000358923 MTMR10Q9NXD2 777 aa18.51■□□□□ 0.55
PDE4D-204ENST00000358923 MYO7AQ13402 2215 aa18.51■□□□□ 0.55
PDE4D-204ENST00000358923 XPO1O14980 1071 aaKnown RBP18.51■□□□□ 0.55
PDE4D-204ENST00000358923 ATP6V1G1O75348 118 aa18.51■□□□□ 0.55
PDE4D-204ENST00000358923 MRPS5P82675 430 aaKnown RBP18.51■□□□□ 0.55
PDE4D-204ENST00000358923 MSS51Q4VC12 460 aa18.51■□□□□ 0.55
PDE4D-204ENST00000358923 DARS2Q6PI48 645 aaKnown RBP18.51■□□□□ 0.55
PDE4D-204ENST00000358923 SLC26A9Q7LBE3 791 aa18.51■□□□□ 0.55
PDE4D-204ENST00000358923 PIGWQ7Z7B1 504 aa18.51■□□□□ 0.55
PDE4D-204ENST00000358923 TMEM173Q86WV6 379 aaPredicted RBP18.51■□□□□ 0.55
PDE4D-204ENST00000358923 RSPH1Q8WYR4 309 aa18.51■□□□□ 0.55
PDE4D-204ENST00000358923 VCXQ9H320 206 aa18.51■□□□□ 0.55
PDE4D-204ENST00000358923 AP4E1Q9UPM8 1137 aa18.51■□□□□ 0.55
PDE4D-204ENST00000358923 NCAM1P13591 858 aa18.51■□□□□ 0.55
PDE4D-204ENST00000358923 SP100P23497 879 aaPredicted RBP18.51■□□□□ 0.55
PDE4D-204ENST00000358923 RPL22P35268 128 aaKnown RBP18.51■□□□□ 0.55
PDE4D-204ENST00000358923 YWHAZP63104 245 aaKnown RBP18.51■□□□□ 0.55
PDE4D-204ENST00000358923 DYDC1Q8WWB3 177 aa18.51■□□□□ 0.55
PDE4D-204ENST00000358923 RSAD2Q8WXG1 361 aa18.51■□□□□ 0.55
PDE4D-204ENST00000358923 NUP205Q92621 2012 aa18.51■□□□□ 0.55
PDE4D-204ENST00000358923 TBC1D13Q9NVG8 400 aa18.51■□□□□ 0.55
PDE4D-204ENST00000358923 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.51■□□□□ 0.55
PDE4D-204ENST00000358923 DLGAP2Q9P1A6 1054 aa18.51■□□□□ 0.55
PDE4D-204ENST00000358923 ARVCFO00192 962 aa18.5■□□□□ 0.55
PDE4D-204ENST00000358923 L1CAMP32004 1257 aa18.5■□□□□ 0.55
PDE4D-204ENST00000358923 GBP1P32455 592 aa18.5■□□□□ 0.55
PDE4D-204ENST00000358923 TUSC3Q13454 348 aa18.5■□□□□ 0.55
PDE4D-204ENST00000358923 OVOS1Q6IE37 1185 aa18.5■□□□□ 0.55
PDE4D-204ENST00000358923 FAM117BQ6P1L5 589 aa18.5■□□□□ 0.55
PDE4D-204ENST00000358923 PXYLP1Q8TE99 480 aa18.5■□□□□ 0.55
PDE4D-204ENST00000358923 GRK7Q8WTQ7 553 aa18.5■□□□□ 0.55
PDE4D-204ENST00000358923 ZNF317Q96PQ6 595 aaPredicted RBP18.5■□□□□ 0.55
PDE4D-204ENST00000358923 RNF157Q96PX1 679 aa18.5■□□□□ 0.55
PDE4D-204ENST00000358923 RBM15Q96T37 977 aaKnown RBP eCLIP18.5■□□□□ 0.55
PDE4D-204ENST00000358923 TRIM56Q9BRZ2 755 aaKnown RBP18.5■□□□□ 0.55
PDE4D-204ENST00000358923 GGT7Q9UJ14 662 aa18.5■□□□□ 0.55
PDE4D-204ENST00000358923 LRRC42Q9Y546 428 aa18.5■□□□□ 0.55
PDE4D-204ENST00000358923 CASP8AP2Q9UKL3 1982 aa18.5■□□□□ 0.55
PDE4D-204ENST00000358923 RBL1P28749 1068 aa18.5■□□□□ 0.55
PDE4D-204ENST00000358923 BASP1P80723 227 aaKnown RBP18.5■□□□□ 0.55
PDE4D-204ENST00000358923 CCDC89Q8N998 374 aa18.5■□□□□ 0.55
PDE4D-204ENST00000358923 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.5■□□□□ 0.55
PDE4D-204ENST00000358923 SLCO2A1Q92959 643 aa18.5■□□□□ 0.55
PDE4D-204ENST00000358923 CENPTQ96BT3 561 aa18.5■□□□□ 0.55
PDE4D-204ENST00000358923 SAYSD1Q9NPB0 183 aa18.5■□□□□ 0.55
PDE4D-204ENST00000358923 TDRD15B5MCY1 1934 aaKnown RBP18.49■□□□□ 0.55
PDE4D-204ENST00000358923 CAPN9O14815 690 aa18.49■□□□□ 0.55
PDE4D-204ENST00000358923 ITIH2P19823 946 aa18.49■□□□□ 0.55
PDE4D-204ENST00000358923 ATP6V1C1P21283 382 aa18.49■□□□□ 0.55
PDE4D-204ENST00000358923 LRRC8DQ7L1W4 858 aa18.49■□□□□ 0.55
PDE4D-204ENST00000358923 LRRC34Q8IZ02 419 aa18.49■□□□□ 0.55
PDE4D-204ENST00000358923 CCDC97Q96F63 343 aaPredicted RBP18.49■□□□□ 0.55
PDE4D-204ENST00000358923 TRAIPQ9BWF2 469 aa18.49■□□□□ 0.55
PDE4D-204ENST00000358923 ABI2Q9NYB9 513 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms