RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 TOE1Q96GM8 510 aaKnown RBP20.29■□□□□ 0.84
ITGA4-202ENST00000339307 PIWIL1Q96J94 861 aaKnown RBP20.29■□□□□ 0.84
ITGA4-202ENST00000339307 SLC2A11Q9BYW1 496 aa20.29■□□□□ 0.84
ITGA4-202ENST00000339307 CTNND2Q9UQB3 1225 aa20.29■□□□□ 0.84
ITGA4-202ENST00000339307 HBS1LQ9Y450 684 aaKnown RBP20.29■□□□□ 0.84
ITGA4-202ENST00000339307 ACACBO00763 2458 aa20.29■□□□□ 0.84
ITGA4-202ENST00000339307 ADAMTS9Q9P2N4 1935 aa20.29■□□□□ 0.84
ITGA4-202ENST00000339307 BIN1O00499 593 aa20.28■□□□□ 0.84
ITGA4-202ENST00000339307 OPHN1O60890 802 aa20.28■□□□□ 0.84
ITGA4-202ENST00000339307 CALCAP01258 141 aa20.28■□□□□ 0.84
ITGA4-202ENST00000339307 SYPP08247 313 aa20.28■□□□□ 0.84
ITGA4-202ENST00000339307 PAEPP09466 180 aa20.28■□□□□ 0.84
ITGA4-202ENST00000339307 SPINK2P20155 84 aa20.28■□□□□ 0.84
ITGA4-202ENST00000339307 BRD2P25440 801 aaKnown RBP20.28■□□□□ 0.84
ITGA4-202ENST00000339307 PPP1R2P41236 205 aa20.28■□□□□ 0.84
ITGA4-202ENST00000339307 PEAR1Q5VY43 1037 aaPredicted RBP20.28■□□□□ 0.84
ITGA4-202ENST00000339307 LCLAT1Q6UWP7 414 aa20.28■□□□□ 0.84
ITGA4-202ENST00000339307 TMPRSS6Q8IU80 811 aa20.28■□□□□ 0.84
ITGA4-202ENST00000339307 OR2I1PQ8NGU4 316 aa20.28■□□□□ 0.84
ITGA4-202ENST00000339307 KCTD13Q8WZ19 329 aa20.28■□□□□ 0.84
ITGA4-202ENST00000339307 PRCCQ92733 491 aaPredicted RBP20.28■□□□□ 0.84
ITGA4-202ENST00000339307 FOXJ1Q92949 421 aa20.28■□□□□ 0.84
ITGA4-202ENST00000339307 KAT5Q92993 513 aa20.28■□□□□ 0.84
ITGA4-202ENST00000339307 SIPA1Q96FS4 1042 aa20.28■□□□□ 0.84
ITGA4-202ENST00000339307 GPR174Q9BXC1 333 aa20.28■□□□□ 0.84
ITGA4-202ENST00000339307 MKRN2Q9H000 416 aaKnown RBP20.28■□□□□ 0.84
ITGA4-202ENST00000339307 MIR1-1HGQ9H1L0 117 aa20.28■□□□□ 0.84
ITGA4-202ENST00000339307 CNGB3Q9NQW8 809 aa20.28■□□□□ 0.84
ITGA4-202ENST00000339307 TIMM44O43615 452 aa20.27■□□□□ 0.84
ITGA4-202ENST00000339307 GNSP15586 552 aa20.27■□□□□ 0.84
ITGA4-202ENST00000339307 STX17P56962 302 aa20.27■□□□□ 0.84
ITGA4-202ENST00000339307 DAOAP59103 153 aa20.27■□□□□ 0.84
ITGA4-202ENST00000339307 EIF4HQ15056 248 aaKnown RBP20.27■□□□□ 0.84
ITGA4-202ENST00000339307 FNDC3BQ53EP0 1204 aaKnown RBP20.27■□□□□ 0.84
ITGA4-202ENST00000339307 WDR45BQ5MNZ6 344 aa20.27■□□□□ 0.84
ITGA4-202ENST00000339307 MINDY1Q8N5J2 469 aa20.27■□□□□ 0.84
ITGA4-202ENST00000339307 UBR7Q8N806 425 aa20.27■□□□□ 0.84
ITGA4-202ENST00000339307 ZNF419Q96HQ0 510 aaPredicted RBP20.27■□□□□ 0.84
ITGA4-202ENST00000339307 MIS12Q9H081 205 aa20.27■□□□□ 0.84
ITGA4-202ENST00000339307 PLA2G4CQ9UP65 541 aa20.27■□□□□ 0.84
ITGA4-202ENST00000339307 BICDL2A1A5D9 508 aa20.27■□□□□ 0.83
ITGA4-202ENST00000339307 RNF225M0QZC1 329 aaPredicted RBP20.27■□□□□ 0.83
ITGA4-202ENST00000339307 ARHGAP33O14559 1287 aa20.27■□□□□ 0.83
ITGA4-202ENST00000339307 HLA-EP13747 358 aa20.27■□□□□ 0.83
ITGA4-202ENST00000339307 PRKCHP24723 683 aa20.27■□□□□ 0.83
ITGA4-202ENST00000339307 HOXD9P28356 352 aaPredicted RBP20.27■□□□□ 0.83
ITGA4-202ENST00000339307 PI4KAP42356 2102 aa20.27■□□□□ 0.83
ITGA4-202ENST00000339307 ZNF132P52740 706 aa20.27■□□□□ 0.83
ITGA4-202ENST00000339307 CNGA2Q16280 664 aa20.27■□□□□ 0.83
ITGA4-202ENST00000339307 ADGRF1Q5T601 910 aa20.27■□□□□ 0.83
ITGA4-202ENST00000339307 PMF1Q6P1K2 205 aa20.27■□□□□ 0.83
ITGA4-202ENST00000339307 FAM124AQ86V42 546 aa20.27■□□□□ 0.83
ITGA4-202ENST00000339307 CREBRFQ8IUR6 639 aa20.27■□□□□ 0.83
ITGA4-202ENST00000339307 RBBP8NLQ8NC74 664 aaPredicted RBP20.27■□□□□ 0.83
ITGA4-202ENST00000339307 CYB5D2Q8WUJ1 264 aa20.27■□□□□ 0.83
ITGA4-202ENST00000339307 CAPN10Q9HC96 672 aa20.27■□□□□ 0.83
ITGA4-202ENST00000339307 ITM2CQ9NQX7 267 aa20.27■□□□□ 0.83
ITGA4-202ENST00000339307 SUSD2Q9UGT4 822 aa20.27■□□□□ 0.83
ITGA4-202ENST00000339307 NCAM1P13591 858 aa20.26■□□□□ 0.83
ITGA4-202ENST00000339307 PKDCCQ504Y2 493 aa20.26■□□□□ 0.83
ITGA4-202ENST00000339307 TMEM215Q68D42 235 aa20.26■□□□□ 0.83
ITGA4-202ENST00000339307 CHST9Q7L1S5 443 aa20.26■□□□□ 0.83
ITGA4-202ENST00000339307 FAM217AQ8IXS0 508 aa20.26■□□□□ 0.83
ITGA4-202ENST00000339307 CLEC4CQ8WTT0 213 aa20.26■□□□□ 0.83
ITGA4-202ENST00000339307 SLC35F5Q8WV83 523 aa20.26■□□□□ 0.83
ITGA4-202ENST00000339307 ST7Q9NRC1 585 aa20.26■□□□□ 0.83
ITGA4-202ENST00000339307 ABCB8Q9NUT2 735 aa20.26■□□□□ 0.83
ITGA4-202ENST00000339307 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.26■□□□□ 0.83
ITGA4-202ENST00000339307 GOLGA6L7A0A1B0GV03 622 aa20.25■□□□□ 0.83
ITGA4-202ENST00000339307 SPAARA0A1B0GVQ0 90 aa20.25■□□□□ 0.83
ITGA4-202ENST00000339307 TOP3BO95985 862 aaKnown RBP20.25■□□□□ 0.83
ITGA4-202ENST00000339307 KRT5P13647 590 aa20.25■□□□□ 0.83
ITGA4-202ENST00000339307 HLA-FP30511 346 aa20.25■□□□□ 0.83
ITGA4-202ENST00000339307 OXTRP30559 389 aa20.25■□□□□ 0.83
ITGA4-202ENST00000339307 SLC11A2P49281 568 aa20.25■□□□□ 0.83
ITGA4-202ENST00000339307 TPMTP51580 245 aa20.25■□□□□ 0.83
ITGA4-202ENST00000339307 ZNF445P59923 1031 aa20.25■□□□□ 0.83
ITGA4-202ENST00000339307 SIM1P81133 766 aaPredicted RBP20.25■□□□□ 0.83
ITGA4-202ENST00000339307 STILQ15468 1287 aa20.25■□□□□ 0.83
ITGA4-202ENST00000339307 TTI2Q6NXR4 508 aa20.25■□□□□ 0.83
ITGA4-202ENST00000339307 RFWD3Q6PCD5 774 aa20.25■□□□□ 0.83
ITGA4-202ENST00000339307 ARHGEF19Q8IW93 802 aa20.25■□□□□ 0.83
ITGA4-202ENST00000339307 ZNF366Q8N895 744 aa20.25■□□□□ 0.83
ITGA4-202ENST00000339307 EHBP1Q8NDI1 1231 aa20.25■□□□□ 0.83
ITGA4-202ENST00000339307 IRGQQ8WZA9 623 aa20.25■□□□□ 0.83
ITGA4-202ENST00000339307 WSB2Q9NYS7 404 aaPredicted RBP20.25■□□□□ 0.83
ITGA4-202ENST00000339307 STIM2Q9P246 746 aa20.25■□□□□ 0.83
ITGA4-202ENST00000339307 USP36Q9P275 1121 aaKnown RBP20.25■□□□□ 0.83
ITGA4-202ENST00000339307 CACNA1BQ00975 2339 aa20.24■□□□□ 0.83
ITGA4-202ENST00000339307 KCNJ18B7U540 433 aa20.24■□□□□ 0.83
ITGA4-202ENST00000339307 PPP1R3GB7ZBB8 358 aa20.24■□□□□ 0.83
ITGA4-202ENST00000339307 TBL1XO60907 577 aa20.24■□□□□ 0.83
ITGA4-202ENST00000339307 LTFP02788 710 aa20.24■□□□□ 0.83
ITGA4-202ENST00000339307 TBX4P57082 545 aa20.24■□□□□ 0.83
ITGA4-202ENST00000339307 KCNH2Q12809 1159 aa20.24■□□□□ 0.83
ITGA4-202ENST00000339307 SEMA3BQ13214 749 aa20.24■□□□□ 0.83
ITGA4-202ENST00000339307 ENPP2Q13822 863 aa20.24■□□□□ 0.83
ITGA4-202ENST00000339307 DCAF12L1Q5VU92 463 aa20.24■□□□□ 0.83
ITGA4-202ENST00000339307 METTL3Q86U44 580 aaKnown RBP20.24■□□□□ 0.83
ITGA4-202ENST00000339307 UNC45BQ8IWX7 931 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms