RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 FICDQ9BVA6 458 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 GSDMCQ9BYG8 508 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 AGPAT5Q9NUQ2 364 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 ENTPD4Q9Y227 616 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 GOLGA4Q13439 2230 aaKnown RBP16.78■□□□□ 0.28
PTCH1-201ENST00000331920 MOXD2PA6NHM9 499 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 ZW10O43264 779 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 GARTP22102 1010 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 LIFRP42702 1097 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 GEMP55040 296 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 HSF2Q03933 536 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 EFEMP1Q12805 493 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 PYHIN1Q6K0P9 492 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 FEZF2Q8TBJ5 459 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 DPF3Q92784 378 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 ATXN2Q99700 1313 aaKnown RBP16.78■□□□□ 0.28
PTCH1-201ENST00000331920 CRTAMO95727 393 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 PRKAR2AP13861 404 aaKnown RBP16.78■□□□□ 0.28
PTCH1-201ENST00000331920 HPCAL1P37235 193 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 ABRAXAS1Q6UWZ7 409 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 CLEC4GQ6UXB4 293 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 CYP2R1Q6VVX0 501 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 TBC1D10CQ8IV04 446 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 RGL4Q8IZJ4 473 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 MFSD1Q9H3U5 465 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 STOML2Q9UJZ1 356 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 MGAT4AQ9UM21 535 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 CYP2A7P20853 494 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 DLG1Q12959 904 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 ZNF579Q8NAF0 562 aaKnown RBP16.78■□□□□ 0.28
PTCH1-201ENST00000331920 C1QTNF1Q9BXJ1 281 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 SENP6Q9GZR1 1112 aaPredicted RBP16.78■□□□□ 0.28
PTCH1-201ENST00000331920 OGDHLQ9ULD0 1010 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 UQCRBP14927 111 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 NOTUMQ6P988 496 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 NEK6Q9HC98 313 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 RAD54BQ9Y620 910 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 PVALEFA0A1B0GWK0 134 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 TBKBP1A7MCY6 615 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 GPAT3Q53EU6 434 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 CYB5D1Q6P9G0 228 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 SPEF1Q9Y4P9 236 aa16.78■□□□□ 0.28
PTCH1-201ENST00000331920 OXCT1P55809 520 aa16.77■□□□□ 0.28
PTCH1-201ENST00000331920 LSM3P62310 102 aaKnown RBP16.77■□□□□ 0.28
PTCH1-201ENST00000331920 POU6F1Q14863 301 aa16.77■□□□□ 0.28
PTCH1-201ENST00000331920 NRF1Q16656 503 aa16.77■□□□□ 0.28
PTCH1-201ENST00000331920 SWI5Q1ZZU3 235 aa16.77■□□□□ 0.28
PTCH1-201ENST00000331920 POLD2P49005 469 aa16.77■□□□□ 0.28
PTCH1-201ENST00000331920 ZNF613Q6PF04 617 aa16.77■□□□□ 0.28
PTCH1-201ENST00000331920 DET1Q7L5Y6 550 aa16.77■□□□□ 0.28
PTCH1-201ENST00000331920 SETD6Q8TBK2 473 aa16.77■□□□□ 0.28
PTCH1-201ENST00000331920 RUBCNQ92622 972 aa16.77■□□□□ 0.28
PTCH1-201ENST00000331920 REEP2Q9BRK0 252 aa16.77■□□□□ 0.28
PTCH1-201ENST00000331920 MTSS1O43312 755 aa16.77■□□□□ 0.28
PTCH1-201ENST00000331920 MYL4P12829 197 aa16.77■□□□□ 0.28
PTCH1-201ENST00000331920 EPORP19235 508 aa16.77■□□□□ 0.28
PTCH1-201ENST00000331920 KCNMA1Q12791 1236 aa16.77■□□□□ 0.28
PTCH1-201ENST00000331920 REXO1L1PQ8IX06 675 aa16.77■□□□□ 0.28
PTCH1-201ENST00000331920 CDADC1Q9BWV3 514 aa16.77■□□□□ 0.28
PTCH1-201ENST00000331920 BSDC1Q9NW68 430 aaPredicted RBP16.77■□□□□ 0.28
PTCH1-201ENST00000331920 DPP3Q9NY33 737 aa16.77■□□□□ 0.28
PTCH1-201ENST00000331920 AKAP7Q9P0M2 348 aaPredicted RBP16.77■□□□□ 0.28
PTCH1-201ENST00000331920 ZNF232Q9UNY5 417 aa16.77■□□□□ 0.28
PTCH1-201ENST00000331920 TM9SF1O15321 606 aa16.77■□□□□ 0.28
PTCH1-201ENST00000331920 SPIDRQ14159 915 aa16.77■□□□□ 0.28
PTCH1-201ENST00000331920 LDHDQ86WU2 507 aa16.77■□□□□ 0.28
PTCH1-201ENST00000331920 OR2L5Q8NG80 312 aa16.77■□□□□ 0.28
PTCH1-201ENST00000331920 SLC20A1Q8WUM9 679 aa16.77■□□□□ 0.28
PTCH1-201ENST00000331920 ABCB10Q9NRK6 738 aa16.77■□□□□ 0.28
PTCH1-201ENST00000331920 DSEQ9UL01 958 aa16.77■□□□□ 0.28
PTCH1-201ENST00000331920 UHRF1BP1Q6BDS2 1440 aa16.77■□□□□ 0.28
PTCH1-201ENST00000331920 REXO5Q96IC2 774 aaKnown RBP16.77■□□□□ 0.27
PTCH1-201ENST00000331920 CRATP43155 626 aa16.77■□□□□ 0.27
PTCH1-201ENST00000331920 SEZ6Q53EL9 994 aa16.77■□□□□ 0.27
PTCH1-201ENST00000331920 FBXO36Q8NEA4 188 aa16.77■□□□□ 0.27
PTCH1-201ENST00000331920 SLC4A5Q9BY07 1137 aa16.77■□□□□ 0.27
PTCH1-201ENST00000331920 IGFLR1Q9H665 355 aa16.77■□□□□ 0.27
PTCH1-201ENST00000331920 RASSF1Q9NS23 344 aa16.77■□□□□ 0.27
PTCH1-201ENST00000331920 TPRKBQ9Y3C4 175 aa16.77■□□□□ 0.27
PTCH1-201ENST00000331920 HLA-DRAP01903 254 aa16.77■□□□□ 0.27
PTCH1-201ENST00000331920 DBIP07108 87 aaKnown RBP16.77■□□□□ 0.27
PTCH1-201ENST00000331920 RHOAP61586 193 aa16.77■□□□□ 0.27
PTCH1-201ENST00000331920 EMC2Q15006 297 aa16.77■□□□□ 0.27
PTCH1-201ENST00000331920 ZMYND11Q15326 602 aa16.77■□□□□ 0.27
PTCH1-201ENST00000331920 OR52L1Q8NGH7 329 aa16.77■□□□□ 0.27
PTCH1-201ENST00000331920 ADPRHL2Q9NX46 363 aa16.77■□□□□ 0.27
PTCH1-201ENST00000331920 LRRC34Q8IZ02 419 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 RNF148Q8N7C7 305 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 C3orf20Q8ND61 904 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 GDPD5Q8WTR4 605 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 PIH1D1Q9NWS0 290 aaKnown RBP16.76■□□□□ 0.27
PTCH1-201ENST00000331920 SCAF8Q9UPN6 1271 aaKnown RBP16.76■□□□□ 0.27
PTCH1-201ENST00000331920 CES2O00748 559 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 OR5F1O95221 314 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 ITGALP20701 1170 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 GJB7Q6PEY0 223 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 FAM9CQ8IZT9 166 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 MRPS31Q92665 395 aaKnown RBP16.76■□□□□ 0.27
PTCH1-201ENST00000331920 BPIFA3Q9BQP9 254 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 LY9Q9HBG7 655 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms