RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 WDR49Q8IV35 697 aa16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 ZSCAN18Q8TBC5 510 aaPredicted RBP16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 CDRT15Q96T59 188 aa16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 TIMMDC1Q9NPL8 285 aa16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 HBS1LQ9Y450 684 aaKnown RBP16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 F8W810 466 aa16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 NUDT17P0C025 328 aa16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 POU1F1P28069 291 aa16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 ITGADQ13349 1161 aa16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 CEP78Q5JTW2 689 aa16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 ARMC3Q5W041 872 aa16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 SLC44A2Q8IWA5 706 aaPredicted RBP16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 CPB2Q96IY4 423 aa16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 MAGED4Q96JG8 741 aa16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 ACP6Q9NPH0 428 aa16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 GGA3Q9NZ52 723 aa16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 C2orf81A6NN90 581 aa16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 GAS2O43903 313 aaKnown RBP16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 TRIM13O60858 407 aa16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 VPS26AO75436 327 aa16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 CXCL8P10145 99 aa16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 HARS2P49590 506 aaKnown RBP16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 RARRES1P49788 294 aa16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 AUHQ13825 339 aaKnown RBP16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 PTAR1Q7Z6K3 402 aaPredicted RBP16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 ZNF398Q8TD17 642 aa16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 KAT5Q92993 513 aa16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 C1orf50Q9BV19 199 aa16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 FAM53CQ9NYF3 392 aa16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 DDTLA6NHG4 134 aaPredicted RBP16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 CDH3P22223 829 aa16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 FASP25445 335 aa16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 CAP2P40123 477 aa16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 INTS5Q6P9B9 1019 aaKnown RBP16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 SNX32Q86XE0 403 aa16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 MRPS26Q9BYN8 205 aaKnown RBP16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 RAD21L1Q9H4I0 556 aa16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 VPS9D1Q9Y2B5 631 aa16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 KLHL33A6NCF5 533 aa16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 GP5P40197 560 aa16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 BCAT1P54687 386 aa16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 NDUFA5Q16718 116 aa16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 GLB1LQ6UWU2 654 aa16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 SAMD7Q7Z3H4 446 aa16.87■□□□□ 0.29
SH3RF1-201ENST00000284637 B3GAT3O94766 335 aa16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 MGAT1P26572 445 aa16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 PSEN1P49768 467 aa16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 NEDD8Q15843 81 aa16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 ZNF618Q5T7W0 954 aa16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 TMEM139Q8IV31 216 aa16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 AGO4Q9HCK5 861 aaKnown RBP16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 ANPEPP15144 967 aa16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 PRKAA1Q13131 559 aa16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 TAF2Q6P1X5 1199 aa16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 C11orf96Q7Z7L8 435 aa16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 GMCL1Q96IK5 515 aa16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 GJD4Q96KN9 370 aaPredicted RBP16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 RNPEPQ9H4A4 650 aa16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 MYOZ2Q9NPC6 264 aa16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 PCDHB8Q9UN66 801 aa16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 CLCA2Q9UQC9 943 aa16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 A0A096LPK6 155 aa16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 TISP43B9A030 160 aa16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 INPP4BO15327 924 aa16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 VTNP04004 478 aa16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 HSMCR30P0CW71 290 aa16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 CYP2B6P20813 491 aa16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 ZNF268Q14587 947 aaPredicted RBP16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 ZCCHC9Q8N567 271 aaKnown RBP16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 SLC25A27O95847 323 aa16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 F9P00740 461 aa16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 MAPK10P53779 464 aa16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 TRIM25Q14258 630 aaKnown RBP16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 UGT3A1Q6NUS8 523 aa16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 CELF6Q96J87 481 aaKnown RBP16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 SLITRK1Q96PX8 696 aa16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 KCTD14Q9BQ13 255 aaPredicted RBP16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 NMRK2Q9NPI5 230 aa16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 SAE1Q9UBE0 346 aaPredicted RBP16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 ACTL7BQ9Y614 415 aa16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 CEP152O94986 1710 aa16.86■□□□□ 0.29
SH3RF1-201ENST00000284637 CLOCKO15516 846 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 MMP13P45452 471 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 SLC16A1P53985 500 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 MIIPQ5JXC2 388 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 C16orf46Q6P387 395 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 SIX5Q8N196 739 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 APBB2Q92870 758 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 PPP1R14BQ96C90 147 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 COPS7BQ9H9Q2 264 aaPredicted RBP16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 TSPAN9O75954 239 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 UPP2O95045 317 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 CCDC166P0CW27 439 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 ETS1P14921 441 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 GALK1P51570 392 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 IL5RAQ01344 420 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 SNX17Q15036 470 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 DHFR2Q86XF0 187 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 CAPSLQ8WWF8 208 aa16.85■□□□□ 0.29
SH3RF1-201ENST00000284637 PPP1R10Q96QC0 940 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 786.4 ms