RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 MYPNQ86TC9 1320 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 GNG14A0A1W2PPG7 69 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 A0A1W2PQ72 361 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 H7C4K7 107 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 RASGRP1O95267 797 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 RCVRNP35243 200 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 ITGA1P56199 1179 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 ZFP69Q49AA0 526 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 CYP20A1Q6UW02 462 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 SYDE1Q6ZW31 735 aaPredicted RBP11.37□□□□□ -0.59
MSH6-201ENST00000234420 COLGALT2Q8IYK4 626 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 PARP8Q8N3A8 854 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 TAGLN3Q9UI15 199 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 SHOC2Q9UQ13 582 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 FAM92AA1XBS5 289 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 TRPC5OSA6NMA1 111 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 ZNF879B4DU55 563 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 F5H5T6 163 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 PRPF3O43395 683 aaKnown RBP11.37□□□□□ -0.59
MSH6-201ENST00000234420 ADD2P35612 726 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 SLC11A2P49281 568 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 TSNQ15631 228 aaKnown RBP11.37□□□□□ -0.59
MSH6-201ENST00000234420 TRMT5Q32P41 509 aaKnown RBP11.37□□□□□ -0.59
MSH6-201ENST00000234420 LIN54Q6MZP7 749 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 OR7A2PQ8NGA2 310 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 MOSPD2Q8NHP6 518 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 HTRA1Q92743 480 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 TSPAN17Q96FV3 270 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 MAGEB18Q96M61 343 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 CORO1BQ9BR76 489 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 UNKQ9C0B0 810 aaKnown RBP11.37□□□□□ -0.59
MSH6-201ENST00000234420 RXFP1Q9HBX9 757 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 RIC8BQ9NVN3 520 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 NUP50Q9UKX7 468 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 OGDHLQ9ULD0 1010 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 ALAS2P22557 587 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 NPY2RP49146 381 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 NFYCQ13952 458 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 SPIDRQ14159 915 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 CLEC16AQ2KHT3 1053 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 CCDC153Q494R4 210 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 ZNF613Q6PF04 617 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 CCDC36Q8IYA8 594 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 TEX13BQ9BXU2 312 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 HMX1Q9NP08 348 aaPredicted RBP11.37□□□□□ -0.59
MSH6-201ENST00000234420 HS6ST1O60243 411 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 NR3C1P04150 777 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 ITGA8P53708 1063 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 PSMD4P55036 377 aaKnown RBP11.37□□□□□ -0.59
MSH6-201ENST00000234420 PDLIM2Q96JY6 352 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 MCEEQ96PE7 176 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 TMEM120AQ9BXJ8 343 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 DDX20Q9UHI6 824 aaKnown RBP11.37□□□□□ -0.59
MSH6-201ENST00000234420 FAM50BQ9Y247 325 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 COL15A1P39059 1388 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 ZBTB5O15062 677 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 ATP6V1G1O75348 118 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 HK2P52789 917 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 PURAQ00577 322 aaKnown RBP11.36□□□□□ -0.59
MSH6-201ENST00000234420 EIF3MQ7L2H7 374 aaKnown RBP11.36□□□□□ -0.59
MSH6-201ENST00000234420 MCPH1Q8NEM0 835 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 RASSF5Q8WWW0 418 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 CENPIQ92674 756 aaPredicted RBP11.36□□□□□ -0.59
MSH6-201ENST00000234420 ZNF184Q99676 751 aaPredicted RBP11.36□□□□□ -0.59
MSH6-201ENST00000234420 PI4K2AQ9BTU6 479 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 DEFB129Q9H1M3 183 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 FBXO28Q9NVF7 368 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 SIRPGQ9P1W8 387 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 A0A087WXM4 84 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 KCNJ1P48048 391 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 IST1P53990 364 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 AQP5P55064 265 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 PMF1Q6P1K2 205 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 RBM44Q6ZP01 1051 aaKnown RBP11.36□□□□□ -0.59
MSH6-201ENST00000234420 LDHDQ86WU2 507 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 CCDC185Q8N715 623 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 SLC35G2Q8TBE7 412 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 RPRD1AQ96P16 312 aaPredicted RBP11.36□□□□□ -0.59
MSH6-201ENST00000234420 BPIFA3Q9BQP9 254 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 ZNF112Q9UJU3 913 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 KDM5DQ9BY66 1539 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 CDHR2Q9BYE9 1310 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 UBE2QL1A1L167 161 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 TCEA3O75764 348 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 RAP1GAPP47736 663 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 UBXN2BQ14CS0 331 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 ABRAXAS1Q6UWZ7 409 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 RIBC1Q8N443 379 aaPredicted RBP11.36□□□□□ -0.59
MSH6-201ENST00000234420 SAMD3Q8N6K7 520 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 XXYLT1Q8NBI6 393 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 ASB12Q8WXK4 309 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 NLNQ9BYT8 704 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 PHF11Q9UIL8 331 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 TSPAN19P0C672 248 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 XRCC4Q13426 336 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 TMEM26Q6ZUK4 368 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 SCAIQ8N9R8 606 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 OR8H1Q8NGG4 311 aa11.36□□□□□ -0.59
MSH6-201ENST00000234420 CELF1Q92879 486 aaKnown RBP11.36□□□□□ -0.59
MSH6-201ENST00000234420 LNPEPQ9UIQ6 1025 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms