RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 VWA5AO00534 786 aa18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 TRDMT1O14717 391 aaKnown RBP18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 CHADO15335 359 aa18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 APOC2P02655 101 aa18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 FGF3P11487 239 aaPredicted RBP18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 IREB2P48200 963 aaKnown RBP18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 RPL10AP62906 217 aaKnown RBP18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 ADRM1Q16186 407 aa18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 SLC44A4Q53GD3 710 aa18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 FAM182AQ5T1J6 154 aa18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 C6orf52Q5T4I8 152 aa18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 MROH9Q5TGP6 573 aa18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 ERI1Q8IV48 349 aaKnown RBP18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 PHTF2Q8N3S3 785 aa18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 ARFGAP1Q8N6T3 406 aa18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 SMYD1Q8NB12 490 aa18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 CDCA5Q96FF9 252 aa18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 SLC9A2Q9UBY0 812 aa18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 GNEQ9Y223 722 aaKnown RBP18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 BOLA2-SMG1P6H3BVE0 249 aa18.22■□□□□ 0.51
CDKN1B-201ENST00000228872 KRT7P08729 469 aa18.22■□□□□ 0.51
CDKN1B-201ENST00000228872 MYL4P12829 197 aa18.22■□□□□ 0.51
CDKN1B-201ENST00000228872 PSMA2P25787 234 aa18.22■□□□□ 0.51
CDKN1B-201ENST00000228872 C4orf19Q8IY42 314 aa18.22■□□□□ 0.51
CDKN1B-201ENST00000228872 CATSPER1Q8NEC5 780 aa18.22■□□□□ 0.51
CDKN1B-201ENST00000228872 CNKSR2Q8WXI2 1034 aa18.22■□□□□ 0.51
CDKN1B-201ENST00000228872 PNPOQ9NVS9 261 aa18.22■□□□□ 0.51
CDKN1B-201ENST00000228872 RSL24D1Q9UHA3 163 aaKnown RBP18.22■□□□□ 0.51
CDKN1B-201ENST00000228872 RIMS3Q9UJD0 308 aa18.22■□□□□ 0.51
CDKN1B-201ENST00000228872 ARHGAP26Q9UNA1 814 aa18.22■□□□□ 0.51
CDKN1B-201ENST00000228872 NUB1Q9Y5A7 615 aa18.22■□□□□ 0.51
CDKN1B-201ENST00000228872 CSADQ9Y600 493 aa18.22■□□□□ 0.51
CDKN1B-201ENST00000228872 LRCH4O75427 683 aa18.22■□□□□ 0.51
CDKN1B-201ENST00000228872 COX4I1P13073 169 aa18.22■□□□□ 0.51
CDKN1B-201ENST00000228872 NCF2P19878 526 aaPredicted RBP18.22■□□□□ 0.51
CDKN1B-201ENST00000228872 OAZ1P54368 228 aa18.22■□□□□ 0.51
CDKN1B-201ENST00000228872 SOX10P56693 466 aa18.22■□□□□ 0.51
CDKN1B-201ENST00000228872 CDKL1Q00532 357 aa18.22■□□□□ 0.51
CDKN1B-201ENST00000228872 CBLBQ13191 982 aa18.22■□□□□ 0.51
CDKN1B-201ENST00000228872 CYP4A22Q5TCH4 519 aa18.22■□□□□ 0.51
CDKN1B-201ENST00000228872 Q6ZNX1 250 aa18.22■□□□□ 0.51
CDKN1B-201ENST00000228872 CATSPERGQ6ZRH7 1159 aa18.22■□□□□ 0.51
CDKN1B-201ENST00000228872 ADCY4Q8NFM4 1077 aa18.22■□□□□ 0.51
CDKN1B-201ENST00000228872 PACSIN3Q9UKS6 424 aa18.22■□□□□ 0.51
CDKN1B-201ENST00000228872 FAF1Q9UNN5 650 aaPredicted RBP18.22■□□□□ 0.51
CDKN1B-201ENST00000228872 A0A0G2JMZ2 1700 aa18.21■□□□□ 0.51
CDKN1B-201ENST00000228872 PHEXP78562 749 aa18.21■□□□□ 0.51
CDKN1B-201ENST00000228872 ROR1Q01973 937 aa18.21■□□□□ 0.51
CDKN1B-201ENST00000228872 MPP3Q13368 585 aa18.21■□□□□ 0.51
CDKN1B-201ENST00000228872 C16orf46Q6P387 395 aa18.21■□□□□ 0.51
CDKN1B-201ENST00000228872 TMEM126BQ8IUX1 230 aa18.21■□□□□ 0.51
CDKN1B-201ENST00000228872 REPS2Q8NFH8 660 aa18.21■□□□□ 0.51
CDKN1B-201ENST00000228872 ATG4CQ96DT6 458 aa18.21■□□□□ 0.51
CDKN1B-201ENST00000228872 AGO4Q9HCK5 861 aaKnown RBP18.21■□□□□ 0.51
CDKN1B-201ENST00000228872 XPNPEP1Q9NQW7 623 aa18.21■□□□□ 0.51
CDKN1B-201ENST00000228872 TUBGCP4Q9UGJ1 667 aa18.21■□□□□ 0.51
CDKN1B-201ENST00000228872 WDR37Q9Y2I8 494 aa18.21■□□□□ 0.51
CDKN1B-201ENST00000228872 ZNF711Q9Y462 761 aa18.21■□□□□ 0.51
CDKN1B-201ENST00000228872 A0A1B0GTW7 788 aa18.21■□□□□ 0.51
CDKN1B-201ENST00000228872 EXTL3O43909 919 aa18.21■□□□□ 0.51
CDKN1B-201ENST00000228872 DKC1O60832 514 aaKnown RBP eCLIP18.21■□□□□ 0.51
CDKN1B-201ENST00000228872 TRPA1O75762 1119 aa18.21■□□□□ 0.51
CDKN1B-201ENST00000228872 LSM8O95777 96 aaKnown RBP18.21■□□□□ 0.51
CDKN1B-201ENST00000228872 APOEP02649 317 aa18.21■□□□□ 0.51
CDKN1B-201ENST00000228872 PRDX6P30041 224 aa18.21■□□□□ 0.51
CDKN1B-201ENST00000228872 GABRB2P47870 512 aa18.21■□□□□ 0.51
CDKN1B-201ENST00000228872 ZNF132P52740 706 aa18.21■□□□□ 0.51
CDKN1B-201ENST00000228872 WDR78Q5VTH9 848 aa18.21■□□□□ 0.51
CDKN1B-201ENST00000228872 DARS2Q6PI48 645 aaKnown RBP18.21■□□□□ 0.51
CDKN1B-201ENST00000228872 ATG14Q6ZNE5 492 aa18.21■□□□□ 0.51
CDKN1B-201ENST00000228872 ANKRD23Q86SG2 305 aa18.21■□□□□ 0.51
CDKN1B-201ENST00000228872 SPATA18Q8TC71 538 aa18.21■□□□□ 0.51
CDKN1B-201ENST00000228872 SLC2A11Q9BYW1 496 aa18.21■□□□□ 0.51
CDKN1B-201ENST00000228872 STK39Q9UEW8 545 aa18.21■□□□□ 0.51
CDKN1B-201ENST00000228872 CTDP1Q9Y5B0 961 aaPredicted RBP18.21■□□□□ 0.51
CDKN1B-201ENST00000228872 HEMK1Q9Y5R4 338 aaPredicted RBP18.21■□□□□ 0.51
CDKN1B-201ENST00000228872 TBXAS1P24557 533 aaPredicted RBP18.2■□□□□ 0.5
CDKN1B-201ENST00000228872 HADHQ16836 314 aaKnown RBP18.2■□□□□ 0.5
CDKN1B-201ENST00000228872 VWA5B1Q5TIE3 1220 aa18.2■□□□□ 0.5
CDKN1B-201ENST00000228872 CROCCP3Q8IVE0 287 aa18.2■□□□□ 0.5
CDKN1B-201ENST00000228872 NTPCRQ9BSD7 190 aaKnown RBP18.2■□□□□ 0.5
CDKN1B-201ENST00000228872 FAM96AQ9H5X1 160 aa18.2■□□□□ 0.5
CDKN1B-201ENST00000228872 RAB6BQ9NRW1 208 aa18.2■□□□□ 0.5
CDKN1B-201ENST00000228872 EMCNQ9ULC0 261 aa18.2■□□□□ 0.5
CDKN1B-201ENST00000228872 OSBPP22059 807 aa18.2■□□□□ 0.5
CDKN1B-201ENST00000228872 RFC1P35251 1148 aaPredicted RBP18.2■□□□□ 0.5
CDKN1B-201ENST00000228872 CDK9P50750 372 aaKnown RBP18.2■□□□□ 0.5
CDKN1B-201ENST00000228872 MRPS22P82650 360 aaKnown RBP18.2■□□□□ 0.5
CDKN1B-201ENST00000228872 NPNTQ6UXI9 565 aa18.2■□□□□ 0.5
CDKN1B-201ENST00000228872 SORT1Q99523 831 aa18.2■□□□□ 0.5
CDKN1B-201ENST00000228872 TRIM56Q9BRZ2 755 aaKnown RBP18.2■□□□□ 0.5
CDKN1B-201ENST00000228872 RTKNQ9BST9 563 aa18.2■□□□□ 0.5
CDKN1B-201ENST00000228872 ZNF195O14628 629 aa18.19■□□□□ 0.5
CDKN1B-201ENST00000228872 DCXO43602 365 aa18.19■□□□□ 0.5
CDKN1B-201ENST00000228872 STAM2O75886 525 aa18.19■□□□□ 0.5
CDKN1B-201ENST00000228872 ALOX15P16050 662 aaPredicted RBP18.19■□□□□ 0.5
CDKN1B-201ENST00000228872 KCNA4P22459 653 aa18.19■□□□□ 0.5
CDKN1B-201ENST00000228872 EIF4BP23588 611 aaKnown RBP18.19■□□□□ 0.5
CDKN1B-201ENST00000228872 HSPA13P48723 471 aa18.19■□□□□ 0.5
CDKN1B-201ENST00000228872 NLRP11P59045 1033 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms